KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:57 2014 Check: 00 .. Name: ENSP00000465894/1-396 Len: 430 Check: 4797 Weight: 1.00 Name: ENSBTAP00000002749/1-399 Len: 430 Check: 1406 Weight: 1.00 Name: ENSTTRP00000003473/1-397 Len: 430 Check: 4040 Weight: 1.00 Name: bmy_02409T0/1-325 Len: 430 Check: 5157 Weight: 1.00 Name: BACU017069/1-377 Len: 430 Check: 5549 Weight: 1.00 // 1 50 ENSP00000465894/1-396 -----MAMIE LGFGRQNFHP LKRKSSLLLK LIAVVFAVLL FCEFLIYYLA ENSBTAP00000002749/1-399 -----MASSQ LGARGQCLRL LKTRGFLLLK LSAAILAVLL FCEFLIYYLV ENSTTRP00000003473/1-397 -----TASTR LGAGRQHLRP LKRRGLVLLR LTAIVFAVLV FCEFLIYYLV bmy_02409T0/1-325 ---------- ---------- ---------- ---------- ---------- BACU017069/1-377 MAAGDMASTR LGAGRQHLRP LKRRGLVLLR LTAIVFAVLL FCEFLIYYLV 51 100 ENSP00000465894/1-396 IFQCNWPEVK TTASDGEQT- --TREPVLKA MFLADTHLLG EFLGHWLDKL ENSBTAP00000002749/1-399 IFRCSWPELK TPEGAGTLGA PKAPEPVLRA MFLADTHLLG AVRGHWLDKL ENSTTRP00000003473/1-397 IFRCSWPAVK TPADAGGLG- --TPEPVLRA MFLADTHLLG AVRGHWLDKL bmy_02409T0/1-325 ---------- ---------- ---------- ---------- ---------- BACU017069/1-377 IFRCSWPAVK TPADAGGLG- --TPEPVLRV MFLADSHLLG AVRGHWLDKL 101 150 ENSP00000465894/1-396 RREWQMERAF QTALWLLQPE VVFILGDIFD EGKWSTPEAW ADDVERFQKM ENSBTAP00000002749/1-399 RREWQMERAF QTAVWLLQPE VVFILGDIFD EGKWSSPEAW ADDVGRFWKV ENSTTRP00000003473/1-397 RREWQMERAF QTALWLLQPE VVFILGDVFD EGKWSSSQAW ADDVGRFWKI bmy_02409T0/1-325 -----MERAF QTALWLLQPE VVFILGDVFD EGKWSSSQAW ADDVGRFWKI BACU017069/1-377 RREWQMERAF QTALWLLQPE VVFILGDIFD EGKWSSSQAW ADDVGRFWKI 151 200 ENSP00000465894/1-396 FRHPSHVQLK VVAGNHDIGF HYEMNTYKVE RFEKVFSSER LFSWKGIN-- ENSBTAP00000002749/1-399 FRHPPHVQLR AVAGNHDIGF HYQMDTYRIK RFEKVFNPER LFSWKGIN-- ENSTTRP00000003473/1-397 FRHPPHVQLR AVAGNHDIGF HYXXXXXXXX XXXXXXXXXX XXXXXXXX-- bmy_02409T0/1-325 FRHPPHVQLR AVAGNHDIGF HYQMNTYKIK RFEKVFNPER LFSWKGINFC BACU017069/1-377 FRHPPHVQLR AVAGNHDIGF HYH------- ---------- ---------- 201 250 ENSP00000465894/1-396 ---------- ---------- ---FVMVNSV ALNGDGCGIC SETEAELIEV ENSBTAP00000002749/1-399 ---------- ---------- ---FVMVNSV ALEGDGCDIC SRAEAELLEI ENSTTRP00000003473/1-397 ---------- ---------- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02409T0/1-325 VPGTQSPADC TGGPWLISCP CLSFVMVNSV ALEGDSCDIC SGAEAELLEI BACU017069/1-377 ---------- ---------- ---FVMVNSV ALEGDGCDIC SGAEAELLEI 251 300 ENSP00000465894/1-396 SHRLNCSRE- ARGSSRCGPG PLLPTSAPVL LQHYPLYRRS DANCSGEDAA ENSBTAP00000002749/1-399 SHWLNCSRE- EHSPRGCGDR QRLPASAPIL LQHFPLYRRN DANCSGEDAA ENSTTRP00000003473/1-397 XXXXXXXXXQ EHRPQECGDR QRLPASAPIL LQHFPLYRRN DANCSGEDAA bmy_02409T0/1-325 SHRLNCSREQ EHRPQECGDG QRLPASAPIL LQHFPLYRRN DANCSGEDAA BACU017069/1-377 SHRLNCSREQ EHRPQECGDG QRLPASAPIL LQHFPLYRRN DANCSGEDAA 301 350 ENSP00000465894/1-396 PAEERDIPFK ENYDVLSREA SQKLLWWLQP RLVLSGHTHS ACEVHHGGRV ENSBTAP00000002749/1-399 PPDEKYTPFK ERYDVLSWEV SRKLLWWLRP RLILSGHTHS ACEVQHRAGV ENSTTRP00000003473/1-397 PPDEKYTPFK ERYDALSQEA SRKLLWWLRP RLVLSGHTHS ACEVLHGAGV bmy_02409T0/1-325 PPDEKYTPFK ERYDALSQEA SRKLLWWLRP RLVLSGHTHS ACEVLHGAGV BACU017069/1-377 PPDEKYTPFK ERYDALSQEA SRKLLWWLRP RLVLSGHTHS ACEVLHGAGV 351 400 ENSP00000465894/1-396 PELSVPSFSW RNRNNPSFIM GSITPTDYTL SKCYLPREDV VLIIYCGVVG ENSBTAP00000002749/1-399 LEVSVPSFSW RNRNNPSFIM GSITPMDYAL AKCYLPREDM VLTTYCVAAG ENSTTRP00000003473/1-397 LEVSVPSFSW RNRNNPSFIM GSVTATEYAL AKCYLPCEDM VLTTYCTAAG bmy_02409T0/1-325 LEVSVPSFSW RNRNNPSFIM GSVTPTEYAL AKCYLPCEDT VLTTYCTAAG BACU017069/1-377 LEVSVPSFSW RNRNNPSFIL GSVTPTEYAL AKCYLPCEDT VLTTYCTAAG 401 450 ENSP00000465894/1-396 FLVVLTLTHF GLLASPFLSG LNLLGKRKTR ENSBTAP00000002749/1-399 CLMLITLIPT GLVSAPFHFG QRVLRKFKTM ENSTTRP00000003473/1-397 GLVLLTLVHA GLVASSFHFG WNMLRKFKTT bmy_02409T0/1-325 GLVLLMLVHA GLVASPFHFG WNMLRKFKTT BACU017069/1-377 GLVLLTLVHA GLVASPFHFG WNMLRKFKTT