KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:58 2014 Check: 00 .. Name: ENSP00000366582/1-535 Len: 535 Check: 1457 Weight: 1.00 Name: ENSBTAP00000002760/1-533 Len: 535 Check: 9991 Weight: 1.00 Name: ENSTTRP00000002039/1-535 Len: 535 Check: 7032 Weight: 1.00 Name: bmy_06216T0/1-449 Len: 535 Check: 4321 Weight: 1.00 Name: BACU018591/1-535 Len: 535 Check: 6832 Weight: 1.00 // 1 50 ENSP00000366582/1-535 MAQQNMKVRP VLLKRNSLES VEFVKQPHHR RSKSQQVRFK EDGTTKNPTG ENSBTAP00000002760/1-533 MAQQSMKVRP VLLKRNSFES VELVKQPHHR RSKSQQVRFK EDGTSKTPPG ENSTTRP00000002039/1-535 MAQQSMKVRP VLLKHNSLES VELAKQPHHR RSKSQQVRFK EDGTSKTPPA bmy_06216T0/1-449 MAQQSMKVRP VLLKRNSLES VELVKQPHHR RSKSQQVRFK EDGTSKTPPA BACU018591/1-535 MAQQSMKVRP VLLKRNSLES VEPVKQPHHR RSKSQQVRFK EDGTRKTPPA 51 100 ENSP00000366582/1-535 LAEVDVQTPE DPAVMGKTQA TRHHLPPTYS LSFPRSQKAG GFRNIAIQTS ENSBTAP00000002760/1-533 LAEVDVQASE DPAVMGKTQA SRHHHLPTYS LSFPRSQKAG GFRNIAIQTS ENSTTRP00000002039/1-535 RAEVDIQTPE HPAVMGETQA SGHHHLPTYS LSFPRSQKAG GFRHIAIQTS bmy_06216T0/1-449 LAEVDIQTSE DPAVTGKTQA SGHHHLPTYS LSFPRSQQAG GFRHIAIQTS BACU018591/1-535 LAEADMQTSE DPAVMGKTHA SGHHHLPTYS LSFPRSQQAG GFRHIAIQTS 101 150 ENSP00000366582/1-535 PSLRKHFPVF KRKRLTASKS LVEMPTASQS AIQVNGNLSE QDIVSSDLAY ENSBTAP00000002760/1-533 PSLRKHFPVF KRKRLTASKS LVEMPTASQS AIQVNGNLSE QDIVSSDLAY ENSTTRP00000002039/1-535 PSLRKHFPVF KRKRLTASKS LVEMQTASQS AIQVNGNLSE QDIVSSDLAY bmy_06216T0/1-449 PSLRKHFPVF KRKRLTASKS LVEMQTASQS AIQVNGNLSE QDIVSSDLAY BACU018591/1-535 PSLRKHFPVF KRKRLTASKS LVEMQTASQS AIQVNGNLSE QDIVASDLAY 151 200 ENSP00000366582/1-535 LRLAQHLEDG PRRVKVSHAF LPRVPKVQSN GPVSICLEAG TWRSLEKATA ENSBTAP00000002760/1-533 LRLAQHLEDG PRRVKVSHPF LPRMSKVQSN GPVSLCFEAG TWRALEKVTA ENSTTRP00000002039/1-535 LRLSRHLEDG PQRVKASHPF LPRMSKVQSN GPVSICLETG TWRASEKATA bmy_06216T0/1-449 LRLARHLEDG PQRVKVSHPF LPRMSKVQSN GPVSICLEAG TWRASEKATA BACU018591/1-535 LRLARHLEDG PQRVKVSHPF LPRMSKVQSN GPVSICLEAG TWRASEKATA 201 250 ENSP00000366582/1-535 AIQVPDDIYH SPSWEARESA LSPDRSAEVS NSIHPLDDTR PGDGRRVTPL ENSBTAP00000002760/1-533 AIQVPDDIYH SPTWAGREST LSPDRSAEMS NSIPPSVDRR PGDGRRELPP ENSTTRP00000002039/1-535 AIQVPDDIYH SPTWAGREST FSPDRSAEIS NSIPTLVDMC PGDGRRVPPS bmy_06216T0/1-449 AIQVPDDIYH SPTWAGREST FSPDRSAEIS NSIPTLVDTH PGDGRRVPPS BACU018591/1-535 AIQVPDDIYH SPTWAGREST FSPDRSAEIS NSIPTLVDMH PGDGRRVPPP 251 300 ENSP00000366582/1-535 DSEKSTSCLN ATSVASHTPG TEELKPELLL PKDNSDDKDL GSLSSQSKET ENSBTAP00000002760/1-533 DSERIPPCLN APSRANHMPG TGNLQPELLL PKDNSDDKDL GPLSSRSKER ENSTTRP00000002039/1-535 DSERPLSCLN ATSGANHMPG TGKLKPEMLL PKDNSDDKDL GPLSSQSKET bmy_06216T0/1-449 DSERPLSCLN ATSGANHVPS TGKLKPEMLL PKDNSDDKDL GPLSSQSKET BACU018591/1-535 DSERPLSCLN ATSGANHMPS TGKLTPETLL PKDNSDDKDL GPLSSQSKET 301 350 ENSP00000366582/1-535 CVPSSPRTHS SPSQGSHSQP AHPGRASDCP SSSNNHQNLV SLKTNSASKS ENSBTAP00000002760/1-533 CAPSHPRTHS SPPPGSQSQP AQPGGASDCS SLSNNYQDLQ SLQTNSESGS ENSTTRP00000002039/1-535 CVPSHPQTHS SPSPGSHSQP AQPGGASDCA SSSNNHQDLQ SLKTNSESKS bmy_06216T0/1-449 CVPSHRRTHS SPSPGSHSQP AQPGGASDCA SSSNNHQDLQ SLKTNSESKS BACU018591/1-535 CVPSHPRTHS SPSPGSHSQP AQPGGASDCA SSSNNHQDLQ SLKTNSESKS 351 400 ENSP00000366582/1-535 APGCQEQTAN NPTESDTLEF PNCPGSNHLP SSLSRSETKL QSNREISDIN ENSBTAP00000002760/1-533 APVCQEQTAK NPIKSDIPEL QNCPGSGHLP SSLPNRETKQ QRVT--GGIN ENSTTRP00000002039/1-535 APVCQEQMAK NPFQSHIPAF QNCPESDHLP SSLPRRETER QGTTEMGALN bmy_06216T0/1-449 APVCQEQTAK NPFQSHIPAF QNCPESDHLP SSPPRRETKQ QGTTEMGALN BACU018591/1-535 APVCQEQTAK NPFQSHIPAF QNCPESDHLP SSLPRRETKQ QGTTEMGALN 401 450 ENSP00000366582/1-535 QIHLARGELC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEGR ENSBTAP00000002760/1-533 PIHLVQGELC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEGR ENSTTRP00000002039/1-535 PTHLAQGEFC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEGR bmy_06216T0/1-449 PIHLAQGEFC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEG- BACU018591/1-535 PIHLAQGEFC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEGR 451 500 ENSP00000366582/1-535 NFYRTGQDLN NCSTCQNTAC IIYSVEYDFR QQEGRFHEVL QSLEEAEPVE ENSBTAP00000002760/1-533 NFYRTGQDLN NCSTCQNTAC IIYSVEYDFR QQEGRFHEVL QSLEEVELAE ENSTTRP00000002039/1-535 NFYRTGQDLN NCRTCQNTAC IIYSVEYDFR QQEGRFHEVL QSLEEAEPVA bmy_06216T0/1-449 ---------- ---------- ---------- ---------- ---------- BACU018591/1-535 NFYRTGQDLN NCSTCQNTAC IIYSVEYDFR QQEGRFHEVL QSLEEAEPAE 501 550 ENSP00000366582/1-535 EASPPPKSPA EPPAPEKQDL RRKTKKVKKK CFWWI ENSBTAP00000002760/1-533 EASPPPKSPA EPPVPEKQDL RRKTKKVKKK CFWWI ENSTTRP00000002039/1-535 EASPPPKSPA EPSVPEKQDL RRKTKKVKKK CFWWI bmy_06216T0/1-449 ---------- ---------- ---------- ----- BACU018591/1-535 EASPPPKSPA EPPVPEKQDL RRKTKKVKKK CFWWI