KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:58 2014 Check: 00 .. Name: ENSP00000228434/1-199 Len: 199 Check: 3803 Weight: 1.00 Name: ENSBTAP00000002767/1-199 Len: 199 Check: 2140 Weight: 1.00 Name: bmy_05525T0/1-131 Len: 199 Check: 6951 Weight: 1.00 Name: ENSTTRP00000010162/1-163 Len: 199 Check: 8557 Weight: 1.00 // 1 50 ENSP00000228434/1-199 MSSENCFVAE NSSLHPESGQ ENDATSPHFS TRHEGSFQVP VLCAVMNVVF ENSBTAP00000002767/1-199 MNSEDFSATE TSSLHLKREQ QSHATGTYSA TYHEGSIQVP IPCAVVNVVF bmy_05525T0/1-131 MNSEDCSATE TSSLHLKRRQ QNNATRPHFA AYHEGSIQVP IPCAVVNVVF ENSTTRP00000010162/1-163 MNSEDCSATE TSSLHLKRAQ QNNATRLHFA AYHEGSIQVP IPCAVVNVVF 51 100 ENSP00000228434/1-199 ITILIIALIA LSVGQYNCPG QYTFSMPSDS HVSSCSEDWV GYQRKCYFIS ENSBTAP00000002767/1-199 ITTLIIALVA LSVGQYNCPG QYASSAPPNT HVFPCSDDWI GHKGKYYLIS bmy_05525T0/1-131 ITILIIALVA LSVGQYNCPG QYMSSVSPNT HVSSCSDDWI VYQGKCYLIS ENSTTRP00000010162/1-163 ITTLIIALVA LSVGQYNCPG QYMSSVSPNT HVSSCSDDWI VYQGKCYLIS 101 150 ENSP00000228434/1-199 TVKRSWTSAQ NACSEHGATL AVIDSEKDMN FLKRYAGREE HWVGLKKEPG ENSBTAP00000002767/1-199 KKTKNWTLAQ NFCSKHGATL AVIDSKEDMN FLKQHVGRAE HWIGLKNEAG bmy_05525T0/1-131 KKTRNWTLAQ NFCSKHGATL AVIDSEEDMV R--------- ---------- ENSTTRP00000010162/1-163 KKTRNWTLAQ NFCSKHGATL AVIDSEEDMI FLKQHVGRTE HWIGLKNEAD 151 200 ENSP00000228434/1-199 HPWKWSNGKE FNNWFNVTGS DKCVFLKNTE VSSMECEKNL YWICNKPYK ENSBTAP00000002767/1-199 QTWKWSNGQE FNNWFNLTGS ENCAVLNSAE ISSTECDKNL HWICSKPSK bmy_05525T0/1-131 ---------- ---------- ---------- ---------- --------- ENSTTRP00000010162/1-163 QMWKWSNGKK FNN------- ---------- ---------- ---------