KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:02 2014 Check: 00 .. Name: ENSTTRP00000000877/1-215 Len: 621 Check: 6872 Weight: 1.00 Name: bmy_20214T0/1-620 Len: 621 Check: 8538 Weight: 1.00 Name: ENSP00000411932/1-547 Len: 621 Check: 147 Weight: 1.00 Name: ENSBTAP00000002790/1-548 Len: 621 Check: 4944 Weight: 1.00 // 1 50 ENSTTRP00000000877/1-215 ---------- ---------- --QLLTSLP- --------LV SLPAAGCLEC bmy_20214T0/1-620 MLKTAYVFTP LCIVTACTTT LKRLSQALPA PVANQPTYLL PLPAAGCLEC ENSP00000411932/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002790/1-548 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000877/1-215 LVLRAPCGSD RAGTMSTFGY RRGLSKYESI DEDELLASLT AEELKELERE bmy_20214T0/1-620 LVLRAPCGSD RAGTMSTFGY RRGLSKYESI DEDELLASLS AEELKELERE ENSP00000411932/1-547 ---------- ----MSTFGY RRGLSKYESI DEDELLASLS AEELKELERE ENSBTAP00000002790/1-548 ---------- ----MSTFGY RRGLSKYESI DEDELLASLS AEELKELERE 101 150 ENSTTRP00000000877/1-215 LEDIEPDRSL PVGMRQKSLT EKTPTGTFSR EALMAYWEKE SPLL------ bmy_20214T0/1-620 LEDIEPDRSL PVGMRQKSLT EKTPTGTFSR EALMAYWEKE SQKLLEKERL ENSP00000411932/1-547 LEDIEPDRNL PVGLRQKSLT EKTPTGTFSR EALMAYWEKE SQKLLEKERL ENSBTAP00000002790/1-548 LDDIEPDHSL PVGMRQKSLT EKTPTGTFSR EALMAYWEKE SQKLLEKERL 151 200 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 GECGKVAEED KEESEEELIF TESNSEVSEE VYTEEEAENE EAEEEDDEEE ENSP00000411932/1-547 GECGKVA-ED KEESEEELIF TESNSEVSEE VYTEE----E EEESQEEEEE ENSBTAP00000002790/1-548 GECGKVAEED KEESEEELVF TECNSEVSED VYT------E EEEEDEDEEE 201 250 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 EDSEGEERMI ENEKGMNGSV HYGSVSSDNS RPETFKSQIE NIHLTNGHSG ENSP00000411932/1-547 EDSDEEERTI ETAKGINGTV NYDSVNSDNS KPKIFKSQIE NINLTNGSNG ENSBTAP00000002790/1-548 EDSEGEERTG ANAEGMNGAV HSDSVHSDNA RPKTFKSQIE NIHLTNGHSG 251 300 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 RNTES-PAAI HPCGNPTVIE DALEKVKSND PDTTEVNLNN IENITSQTLT ENSP00000411932/1-547 RNTES-PAAI HPCGNPTVIE DALDKIKSND PDTTEVNLNN IENITTQTLT ENSBTAP00000002790/1-548 RNTESPPAAI HPCGNPTVIE DALEKIKNND PDTTEVNLNN IENITSQTLA 301 350 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 RFAEALKANT VVKTFSLANT RADDSVATAI AEMLRVNRHI TSVNIESNFI ENSP00000411932/1-547 RFAEALKDNT VVKTFSLANT HADDSAAMAI AEMLKVNEHI TNVNVESNFI ENSBTAP00000002790/1-548 RFAEALKANT VVKTFSLANT RADDSAATAI ADMLRVNRHI TSINIESNFI 351 400 ENSTTRP00000000877/1-215 ---------- ---------- -----HRH-- ---------- ---------- bmy_20214T0/1-620 TGRGILAVTR ALQRNPVLAE LRFHNQRHIM GSQVEMEIVK LLRDNTTLLR ENSP00000411932/1-547 TGKGILAIMR ALQHNTVLTE LRFHNQRHIM GSQVEMEIVK LLKENTTLLR ENSBTAP00000002790/1-548 TGKGILAIMR ALQHNTVLTE LRFHNQRHIM GSQVEMEIVK LLRENTTLLR 401 450 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 LGYHFELPGP RMSMTSLLTR NMDKQRQKRM QEQRQQEGRD AGAHRRTKVW ENSP00000411932/1-547 LGYHFELPGP RMSMTSILTR NMDKQRQKRL QEQKQQEGYD GGPNLRTKVW ENSBTAP00000002790/1-548 LGYHFELPGP RMSMTSLLTR NMDKQRQKRM QEQKQQEGYD GGANLRTKVW 451 500 ENSTTRP00000000877/1-215 ---------- ---------- ---------- ---------- ---------- bmy_20214T0/1-620 GRGTPGSSPL ASPRPSPRSS PKLPKKVQIV RSRPPSPVAP SPPPPPPPPP ENSP00000411932/1-547 QRGTPSSSPY VSPRHSPWSS PKLPKKVQTV RSRPLSPVAT PPPPPPPPPP ENSBTAP00000002790/1-548 QRGTPGSSPY ASPKHSPWSS PKLPKKVQTV RSRPPSPAAP PXPPPPPPPP 501 550 ENSTTRP00000000877/1-215 --PLRPQR-- ---------- --------RS SSHGTSQKSS NSRRVPSGPY bmy_20214T0/1-620 PPPLPPQRLP PPPPPPPPPP LPEKKLITRN IAEVIKQQES AQRALQNGQK ENSP00000411932/1-547 PPP-SSQRL- PPPPPPPPPP LPEKKLITRN IAEVIKQQES AQRALQNGQK ENSBTAP00000002790/1-548 PPPLAPQRL- PPPPPPPPPP APEKKLITRN IAEVIKQQES AQRALQNGQK 551 600 ENSTTRP00000000877/1-215 KMDRKKKGKK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20214T0/1-620 KKKGKKAKKQ PNSILKETRN SLRSVQEKKM EDSSRPSTPQ RSAHENLMEA ENSP00000411932/1-547 KKKGKKVKKQ PNSILKEIKN SLRSVQEKKM EDSSRPSTPQ RSAHENLMEA ENSBTAP00000002790/1-548 KKKGKKAKKQ PNNILKEIKN SLRSVQEKKM EDSSRPSTPQ RSAHENLMEA 601 650 ENSTTRP00000000877/1-215 XXXXXXXXXX XXXXXXXLRL A bmy_20214T0/1-620 IRGSSMRQLK RVSNPRADPG A ENSP00000411932/1-547 IRGSSIKQLK RVEVPEALR- - ENSBTAP00000002790/1-548 IRGSSIKQLR RVEVPEALR- -