KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:02 2014 Check: 00 .. Name: BACU011930/1-324 Len: 367 Check: 9999 Weight: 1.00 Name: ENSP00000323945/1-317 Len: 367 Check: 6112 Weight: 1.00 Name: bmy_00754T0/1-345 Len: 367 Check: 5755 Weight: 1.00 Name: ENSBTAP00000002792/1-314 Len: 367 Check: 1343 Weight: 1.00 // 1 50 BACU011930/1-324 ---------- ---------- ---------- -MPGEQQTEE EEEEEMQEEM ENSP00000323945/1-317 ---------- ---------- ---------- -MPGEQQAEE EEEEEMQEEM bmy_00754T0/1-345 RTWPISGGAD ALGRSGDLRA GRRRRAFKDT KMPGEQQTEE EEEEEMQEEM ENSBTAP00000002792/1-314 ---------- ---------- ---------- -MPGEQQTEE EEEEEMQEEM 51 100 BACU011930/1-324 VLLVKGEEDE GEEKYEVVKL KIPMDNKEVP SEAPAPSADP ARPHACRDCG ENSP00000323945/1-317 VLLVKGEEDE GEEKYEVVKL KIPMDNKEVP GEAPAPSADP ARPHACPDCG bmy_00754T0/1-345 VLLVKGEEDE GEEKYEVVKL KIPMDNKEVP SEAPAPSADP ARPHACRDCG ENSBTAP00000002792/1-314 VLLVKGEEEE GEEKYEVVKL KIPMDNKEVP SEAPAPSADP ARPHACRDCG 101 150 BACU011930/1-324 RAFARRSTLA KHVRIHTGER PFACTECGRR FSQKSALTKH SRTHTGERPY ENSP00000323945/1-317 RAFARRSTLA KHARTHTGER PFGCTECGRR FSQKSALTKH GRTHTGERPY bmy_00754T0/1-345 RAFARRSTLA KHXRIHTGER PFACTECGRR FSQKSALTKH SRTHTGERPY ENSBTAP00000002792/1-314 RAFARRSTLA KHVRIHTGER PFACTECGRR FSQKSALTKH SRTHTGERPY 151 200 BACU011930/1-324 ECPECDKRFS AASNLRQHRR RHTGEKPYAC AQCGRRFAQS SNYAQPLRVH ENSP00000323945/1-317 ECPECDKRFS AASNLRQHRR RHTGEKPYAC AHCGRRFAQS SNYAQHLRVH bmy_00754T0/1-345 ECPECDKRFS AASNLRQHRR RHTGEKPYAC AQCGRRFAQS SNYAQHLRVH ENSBTAP00000002792/1-314 ECPECDKRFS AASNLRQHRR RHTGEKPYAC AQCGRRFAQS SNYAQHLRVH 201 250 BACU011930/1-324 TGEKPYSCPD CGRAFGGSSC LARHRRTHTG ERPYACADCG TRFAQSSALA ENSP00000323945/1-317 TGEKPYACPD CGRAFGGSSC LARHRRTHTG ERPYACADCG TRFAQSSALA bmy_00754T0/1-345 TGEKPYSCPD CGRAFGGSSC LARHRRTHTG ERPYACADCG TRFAQSSALA ENSBTAP00000002792/1-314 TGEKPYACPD CGRAFGGSSC LARHRRTHTG ERPYACADCG TRFAQSSALA 251 300 BACU011930/1-324 KHRRAPA--- PRGAPAASAT APTWRSMRAR TQASGPTHVP SAAGASASAR ENSP00000323945/1-317 KHRRVHTGEK PHRCAVCG-- ----RRFGHR SNLA--EHAR THTGERPYPC bmy_00754T0/1-345 KHRRVHTGEK PHRCAVCG-- ----RGFGHR SNLA--EHAR THTGERPYPC ENSBTAP00000002792/1-314 KHRRVHTGEK PHRCPVCG-- ----RGFGHR SNLA--EHAR THTGERPYPC 301 350 BACU011930/1-324 TSSATVVRIC GAVSISARAA AGTSSYPPEP LPLSAAQIVR AVESPFLSPR ENSP00000323945/1-317 AECGRRFRLS SHFIRHRRAH MRRRLY---- -------ICA GCGRDFKLPP bmy_00754T0/1-345 AECGRRFRLS SHFIRHRRAH MRRRLY---- -------ICA GCGRDFKLPA ENSBTAP00000002792/1-314 SECGRRFRLS SHFIRHRRAH MRRRLY---- -------ICA GCGRDFKLPA 351 400 BACU011930/1-324 GASWGGAR-- ------- ENSP00000323945/1-317 GATAATATER CPECEGS bmy_00754T0/1-345 GAT---ATER CPDCEGS ENSBTAP00000002792/1-314 GAT---ATER CPDCEGS