KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:10 2014 Check: 00 .. Name: ENSP00000340243/1-473 Len: 475 Check: 1919 Weight: 1.00 Name: bmy_08769T0/1-438 Len: 475 Check: 8774 Weight: 1.00 Name: ENSBTAP00000002833/1-472 Len: 475 Check: 4998 Weight: 1.00 Name: BACU015472/1-419 Len: 475 Check: 8899 Weight: 1.00 Name: ENSTTRP00000012355/1-468 Len: 475 Check: 864 Weight: 1.00 // 1 50 ENSP00000340243/1-473 MGAVLGVFSL ASWVPCLCSG ASCLLCSCCP NSKNSTVTRL IYAFILLLST bmy_08769T0/1-438 MGAVLGVFSL ASWVPCLCGG ASCLLCSCCP NSKNSTVTRL IYAFILFLGT ENSBTAP00000002833/1-472 MGAVLGVFSL ASWVPCLCGG ASCLLCSCCP NSKNSTLTRL IYAFILFLGT BACU015472/1-419 MGAVLGVFSL ASWIP----- ---------- ---------- ---------- ENSTTRP00000012355/1-468 MGAVLGVFSL ASWVPCLCGG ASCLLCSCCP NSKNSTVTRL IYAFILFLGT 51 100 ENSP00000340243/1-473 VVSYIMQRKE METYLKKIPG FCEGGFKIHE ADINADKDCD VLVGYKAVYR bmy_08769T0/1-438 IVCCFMFHEG METQLKKIPG FCDEGLKTKV ADTIMDKDCD VLVRYKAVYR ENSBTAP00000002833/1-472 IVCCIMFHEG METQLKKIPG FCDEGLSTRI TDI-MDKECD VLVRYKAVYR BACU015472/1-419 ---------- ---------G FCDEGLKTKV ADTVMDKDCD VLVRYKAVYR ENSTTRP00000012355/1-468 IVCCIMFHEG METQLKKIPG FCDEGLKTKV ADIIMDKHCD VLVRYKAVYR 101 150 ENSP00000340243/1-473 ISFAMAIFFF VFSLLMFKVK TSKDLRAAVH NGFWFFKIAA LIGIMVGSFY bmy_08769T0/1-438 INFALTIFFF AFFLLMLKVK TSKDPRAAIH NGFWFFKIAA IVGIMVGSFY ENSBTAP00000002833/1-472 ISFALAVFFF AFSLLMLNVK TSKDPRAAIH NGFWFFKIAA IVGVMVGSFY BACU015472/1-419 INFALTVFFF AFFLLMLKVK TSKDPRAAIH NGFWFFKIAA IVGIMVGSFY ENSTTRP00000012355/1-468 INFALAVFFF AFFLLMLKVK TSKDPRAAIH NGFWFFKIAA IVGIMVGSFY 151 200 ENSP00000340243/1-473 IPGGYFSSVW FVVGMIGAAL FILIQLVLLV DFAHSWNESW VNRMEEGNPR bmy_08769T0/1-438 IPGGHFTTAW FFIGMVGAAF FILIQLVLLV DFAHSWNESW VNRMEEGNPR ENSBTAP00000002833/1-472 IPGGHFNTAW FVIGMVGAAF FILIQLVLLV DFAHSWNESW VNRMEEGNPK BACU015472/1-419 IPGGHFTTAW FFIGMVGAAF FILIQLVLLV DFAHSWNESW VNRMEEGNPR ENSTTRP00000012355/1-468 IPGGHFTTAW IFIGMVGAAF FILIQLMLLV DFAHSWNS-- ---VNDAEDP 201 250 ENSP00000340243/1-473 LWYAALLSFT SAFYILSIIC VGLLYTYYTK PDGCTENKFF ISINLILCVV bmy_08769T0/1-438 GWYAALLSVT SMFYILSIIS VILLYTYYTK PDGCTENKFF ISFNLILCIV ENSBTAP00000002833/1-472 CWYAALLSVT SLFYILSIIF AGLLYTYYTK PDGCTENKFF ISFNLILCVV BACU015472/1-419 GWYAALLSVT SMFYILSIIS VVLLYTYYTK PDGCTENKFF ISFNLILCVV ENSTTRP00000012355/1-468 CWYAALLSVT SMFYILSIIS VILLYTYYTK PDGCTENKFF ISFNLILCIV 251 300 ENSP00000340243/1-473 ASIISIHPKI QEHQPRSGLL QSSLITLYTM YL--TWSAMS NEPDRSCNPN bmy_08769T0/1-438 VSVMSIHPKI QEHQPRSGLL QSSIITLYTI SFLQPWPV-- ---EHHYAHD ENSBTAP00000002833/1-472 ISVLSIHPKI QEHQPRSGLL QSSLITLYTM YL--TWSAMS NEPDRSCNPG BACU015472/1-419 VSVMSIHPKI QEHQPRSGLL QSSIITLYTM YL--TWSAMS NEPDHSCNPG ENSTTRP00000012355/1-468 VSIMSIHPKI QEHQPRSGLL QSSIITLYTM YL--TWSAMS NEPDHSCNPG 301 350 ENSP00000340243/1-473 LMSFITRITA PTLAPGNSTA VVPTPTPPSK SGSLLDSDNF IGLFVFVLCL bmy_08769T0/1-438 LANL------ -----GSCKC NCSSPYS--- ---------- --------CS ENSBTAP00000002833/1-472 LLSIITHMTS STLAPANTTA PAPTPAVPLQ SGPSLNKENF IGLLVFVLSL BACU015472/1-419 LLSIIMHMTS PTLAPANATA LVPTPAPPSQ SGPSLNKENF IGLVVFVLSL ENSTTRP00000012355/1-468 LLSIIMHMTS PTLAPANATA LAPTPAAPSQ SGPSLNKENF IGLVVFVLSL 351 400 ENSP00000340243/1-473 LYSSIRTSTN SQVDKLTLSG SDSVILGDTT TSGASDEEDG QPRRAVDNEK bmy_08769T0/1-438 TITDIRNASN SQVSKLTLSG SDSVILRDTT ANGASDEEDG RPRRAVDNER ENSBTAP00000002833/1-472 SYSSIRNSSN SQVSKLTLSG SDSVILRDTA ANGASDEEDG RPRRAVDNER BACU015472/1-419 LYSSIRNASN SQVSKLTLSG SDSVILRDTT ANGASDEEDG RPRRAVDNER ENSTTRP00000012355/1-468 LYSSIRNASN SQVSKLTLSG SDSVILRDTT ANGASDEEDG RPRRAVDNER 401 450 ENSP00000340243/1-473 EGVQYSYSLF HLMLCLASLY IMMTLTSWYS PDAKFQSMTS KWPAVWVKIS bmy_08769T0/1-438 EGVQYNYSMF HLMLCSASLY IMMTLTNWYS PDANFQTMTS KWPAVWVKIS ENSBTAP00000002833/1-472 EGVQYNYSMF HLMLCSASLY IMMTLTNWYS PDANFQSMTS KWPAVWVKIS BACU015472/1-419 EGVQYNYSMF HLMLCSASLY IMMTLTNWYS PDANFQTMTS KWPAVWVKIS ENSTTRP00000012355/1-468 EGVQYNYSIF HLMLCSASLY IMMTLTNWYS PDANFQTMTS KWPAVWVKIS 451 500 ENSP00000340243/1-473 SSWVCLLLYV WTLVAPLVLT SRDFS bmy_08769T0/1-438 SSWVCLLLYV WTLVAPLVLT GRDFS ENSBTAP00000002833/1-472 SSWVCLLLYV WTLVAPLVLT NRDFS BACU015472/1-419 SSWVCLLLYV WTLVAPLVLT GRDFS ENSTTRP00000012355/1-468 SSWVCLLLYV WTLVAPLVLT GRDFS