KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:10 2014 Check: 00 .. Name: bmy_07705T0/1-346 Len: 551 Check: 2984 Weight: 1.00 Name: ENSBTAP00000002839/1-442 Len: 551 Check: 4675 Weight: 1.00 Name: BACU001004/1-466 Len: 551 Check: 5046 Weight: 1.00 Name: ENSTTRP00000010260/1-542 Len: 551 Check: 3162 Weight: 1.00 // 1 50 bmy_07705T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002839/1-442 ---------- ---------- ----QANVCR LRLTVPPENP VPEPSEKKVE BACU001004/1-466 MLRSTSTVTL LSSGGSSAPG APNRRANVCR LRLTVPPESP VSEPSEKKVE ENSTTRP00000010260/1-542 MLRSTSTVTL LSSSGSSAPG APNRRANVCR LRLTVPPESP VSESSGKKVE 51 100 bmy_07705T0/1-346 ---------- ----MKLPQG VVYGVVRRSD QNQQKEMVVY GWTTNQLKEE ENSBTAP00000002839/1-442 RREQHRDLSN GESTRKLPQG VVYGVVRRSD QNQQKEMVVY GWTTNQLKEE BACU001004/1-466 RREKYRDLSN DEPTMKLPQG VVYGVVRRSD QNQQKEMVVY GWTTNQLKEE ENSTTRP00000010260/1-542 RREKYRDLSN GEPTMKLPQG VVYGVVRRSD QNQQKEMVVY GWTTNQLKEE 101 150 bmy_07705T0/1-346 MNYIKDVRAT LENVRKRMYG DYDEMRQKIR QLTQELSVSQ AQQEYQQNYT ENSBTAP00000002839/1-442 MNYIKDVRAT LEKVRKRMYG DYDEMRQKIR QLTQELSVSQ AKQDYLENHI BACU001004/1-466 MNYIKDVRAT LENVRKRMYG DYDEMRQKIR QLTQELSVSQ AQQEYQQNYI ENSTTRP00000010260/1-542 MNYIKDVRAT LENVRKRMYG DYDEMRQKIR QLTQELSL-- -------NYI 151 200 bmy_07705T0/1-346 QTQSSALDSF NTMNSALVSD SIGLQKTLVD VTLENSNIKE QIRNLQQTYE ENSBTAP00000002839/1-442 QTQSSALDSF NAMNAALASD SISLQKTLVD VTLENSNIKD QIRNLQQTYT BACU001004/1-466 QTQSSALDSF NTMNSALVSD SIGLQKTLVD VTLENSNIKE QIRNLQQTHE ENSTTRP00000010260/1-542 QTQSSALDSF NTMNSALVSD SIGLQKTLVD VTLENSNIKA QIRNLQQTYE 201 250 bmy_07705T0/1-346 ASMDKLREKQ RQLEVAQVEN QLLKMKVESS QEANAEVMRE LTRKLYSQYE ENSBTAP00000002839/1-442 ASMDKLREKQ RQLDAAQVEN KLLKMKVECS QQANAEVMRE MTRKLYSQYE BACU001004/1-466 ASMDKLREKQ RQLEVAQVEN QLLKMKVESS QEANAEVMRE MTRKLYSQYE ENSTTRP00000010260/1-542 ASMDKLREKQ RQLEVAQVEN QLLKMKVESS QEANAEVMRE MTRKLYSQYE 251 300 bmy_07705T0/1-346 ERLHEEQQRH SAEKEALLEE TNSFLKAIEE ANKKMHVAET SLEEKDQRIG ENSBTAP00000002839/1-442 EKLQEEQQRH NAEKEALLEE TNSFLKAIEE ANKKMQAAEI SLEEKDQRIG BACU001004/1-466 ERLHEEQQRH SAEKEALLEE TNSFLKAIEE ANKKMQVAET SLEEKDQRIG ENSTTRP00000010260/1-542 ERLHEEQQRH SAEREALLEE TNSFLKAIEE ANKKMQVAEI SLEEKDQRIG 301 350 bmy_07705T0/1-346 ELDRLIERME KERHQLQLQL LEHETEMSTE ITNSDKERYQ QLEEASASLR ENSBTAP00000002839/1-442 ELDRLIERME KERHQLQLQL LEHETEMSAE ITDSNKERYQ QLEEASASLR BACU001004/1-466 ELDRLIERME KERHQLQLQL LEHETEMSME ITNSDKERYQ RLEEASASLR ENSTTRP00000010260/1-542 ELDRLIERME KERHQLQLQL LEHETEMSTE ITNSDKERYQ RLEEASASLR 351 400 bmy_07705T0/1-346 ERIRHLDDMV HCQQKKVKQM VEEVSPCERS WARDCFLWWG HF-------- ENSBTAP00000002839/1-442 ERIRHLDDMV HCQQKKVKQM VEEIESLKKK VQQKQLLILQ LLEKISFLEG BACU001004/1-466 ERIRHLDDMV HCQQKKVKQM VEEIESLKKK VQQKQLLILQ LLEKISFLEG ENSTTRP00000010260/1-542 ERIRHLDDMV HCQQKKVKQM VEEIESLKKK VQQKQLLILQ LLEKISFLEG 401 450 bmy_07705T0/1-346 ---------- ---------- ---------- ---------- ----SPR--- ENSBTAP00000002839/1-442 ENNELQSRLD YLIETQSKTE VETREVGVGC DLLPSQTGRT REISMPS--- BACU001004/1-466 ENNELQSRLD YLIETQRKTE VETREVGVGC DLLPSQTGRT REIAVPS--- ENSTTRP00000010260/1-542 ENNELQSRLD YLIETQPKTE VETREVGVGC DLLPSLPSHQ RDSLSPCQRR 451 500 bmy_07705T0/1-346 --------AR YDSQLHLLWL TVN------- ---------- ---------- ENSBTAP00000002839/1-442 --------RN YTPYTRVLEL TTKKTLT--- ---------- ---------- BACU001004/1-466 --------RN YTPYTRVLEL TMKKTLT--- ---------- ---------- ENSTTRP00000010260/1-542 GSPVSSEERR HRDRKHLDDI TAARLLPLHH MPTQLLSTEE SLALQKQQKQ 501 550 bmy_07705T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002839/1-442 ---------- ---------- ---------- ---------- ---------- BACU001004/1-466 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010260/1-542 SYEEMQAKLA AQKLAERLNI KMQSYNPEGE SLRKYQEVRD EGDDQSSDDE 551 600 bmy_07705T0/1-346 - ENSBTAP00000002839/1-442 - BACU001004/1-466 - ENSTTRP00000010260/1-542 F