KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:18 2014 Check: 00 .. Name: ENSTTRP00000007065/1-771 Len: 836 Check: 7831 Weight: 1.00 Name: ENSP00000340839/1-836 Len: 836 Check: 4259 Weight: 1.00 Name: bmy_21887T0/1-676 Len: 836 Check: 8867 Weight: 1.00 Name: ENSBTAP00000002858/1-825 Len: 836 Check: 9377 Weight: 1.00 Name: BACU011798/1-836 Len: 836 Check: 4996 Weight: 1.00 // 1 50 ENSTTRP00000007065/1-771 ---------- -MKKNASKEE KQQPKQENTE QHNADSEE-L NSESDPEQMS ENSP00000340839/1-836 MTATAEVETP KMEKSASKEE KQQPKQDSTE QGNADSEEWM SSESDPEQIS bmy_21887T0/1-676 ---------- ---------- ---------- ------MPWL FAKGTSIATL ENSBTAP00000002858/1-825 ---------- -MKKSASKEE KQQSKQENTE QGNADSEEWL GCESDPEQMS BACU011798/1-836 MTATAAVETP KMKKNASKEE KQQPKQENTE QGNADSEELL SSESDPEQLS 51 100 ENSTTRP00000007065/1-771 LKSSSNDNSC QPGDVQLKKK DIPSKPHRQL CRSPCLDHPS FSQNRLL--- ENSP00000340839/1-836 LKSSDNSKSC QPRDGQLKKK EMHSKPHRQL CRSPCLDRPS FSQSSILQDG bmy_21887T0/1-676 LPVP------ ---------- ---------- ---------- ---------- ENSBTAP00000002858/1-825 LKKSNSDNRC QLGDVQLNKK DILSKPHRQL CRSPCLDHPS FSQSSILHDG BACU011798/1-836 LKSSSNDNSC QPGDVQLKKK EIPSKPHRQL CRSPCLDHPS FSQSSILQDG 101 150 ENSTTRP00000007065/1-771 ---------- ---------- ---------- ---------- ----MMYWQN ENSP00000340839/1-836 KLDLEKEYQA KMEFALKLGY AEEQIQSVLN KLGPESLIND VLAELVRLGN bmy_21887T0/1-676 ---------- ---------- ---------- ---------- ----FVHTGH ENSBTAP00000002858/1-825 KLDLEKEYQT KMDFALKLGY AEEQIQSVLN KLGPESLIND VLAELVRLGN BACU011798/1-836 KLDLEKEYQT KMDFALKLGY AEEQIQLVLN KLGPESLIND VLAELVRLGN 151 200 ENSTTRP00000007065/1-771 LSDLETKV-- ---IWKG-NS REVASPELSL EDEIDNSDNL RPVVIDGSNV ENSP00000340839/1-836 KGDSEGQINL SLLVPRGPSS REIASPELSL EDEIDNSDNL RPVVIDGSNV bmy_21887T0/1-676 IGPV------ ---------- --CVSMGLVV QEKL------ ---------- ENSBTAP00000002858/1-825 KGDLEGQVNL NLLGPRGPSS REITSPELSL EDEIDNSDNL RPVVIDGSNV BACU011798/1-836 KGDLEGQLNL SLLVPRGPSS REVASPELSL EDEIDNSDNL RPVVIDGSNV 201 250 ENSTTRP00000007065/1-771 AMSHGNKEEF SCRGIQLAVE WFLDKGHKDI TVFVPAWRKE QSRPDAPITX ENSP00000340839/1-836 AMSHGNKEEF SCRGIQLAVD WFLDKGHKDI TVFVPAWRKE QSRPDAPITD bmy_21887T0/1-676 ASHHGNKEEF SCRGIQLAVE WFLDKGHKDI TVFVPAWRKE QSRPDAPITD ENSBTAP00000002858/1-825 AMSHGNKEEF SCRGIQLAVD WFLDKGHKDI TVFVPAWRKE QSRPDAPITD BACU011798/1-836 AMSHGNKEEF SCRGIQLAVE WFLDKGHKDI TVFVPAWRKE QSRPDAPITD 251 300 ENSTTRP00000007065/1-771 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000340839/1-836 QDILRKLEKE KILVFTPSRR VQGRRVVCYD DRFIVKLAFD SDGIIVSNDN bmy_21887T0/1-676 QDILRKLEKE KILVFTPSRR VQGRRVVCYD DRFIVKLAFD SDGIIVSNDN ENSBTAP00000002858/1-825 QDILRKLEKE KILVFTPSRR VQGRRVVCYD DRFIVKLAFD SDGIIVSNDN BACU011798/1-836 QDILRKLEKE KILVFTPSRR VQGRRVVCYD DRFIVKLAFD SDGIIVSNDN 301 350 ENSTTRP00000007065/1-771 XXXXXXXXXX XXXXXXXXXX XXXXXXXXFM PPDDPLGRHG PSLENFLRKR ENSP00000340839/1-836 YRDLQVEKPE WKKFIEERLL MYSFVNDKFM PPDDPLGRHG PSLENFLRKR bmy_21887T0/1-676 YRDLQIEKPE WKKFIEERLL MYSFVNDKFM PPDDPLGRHG PSLENFLRKR ENSBTAP00000002858/1-825 YRDLQVEKPE WKKFIEERLL MYSFVNDKFM PPDDPLGRHG PSLENFLRKR BACU011798/1-836 YRDLQIEKPE WKKFIEERLL MYSFVNDKFM PPDDPLGRHG PSLENFLRKR 351 400 ENSTTRP00000007065/1-771 PVVPEHKKQP CPYGKKCTYG HKCKYYHPER ANQPQRSVAD ELRISAKLST ENSP00000340839/1-836 PIVPEHKKQP CPYGKKCTYG HKCKYYHPER ANQPQRSVAD ELRISAKLST bmy_21887T0/1-676 PVVPEHKKQP CPYGKKCTYG HKCKYYHPER ANQPQRSVAD ELRISAKLST ENSBTAP00000002858/1-825 PVVPEHKKQP CPYGKKCTYG HKCKYYHPER ANQPQRSVAD ELRISAKLST BACU011798/1-836 PVVPEHKKQP CPYGKKCTYG HKCKYYHPER ANQPQRSVAD ELRISAKLST 401 450 ENSTTRP00000007065/1-771 VKTMSEGTLA KCGTGLSSTK GDITSEVKRV APKRQSDPSI RSVAVEPEEW ENSP00000340839/1-836 VKTMSEGTLA KCGTGMSSAK GEITSEVKRV APKRQSDPSI RSVAMEPEEW bmy_21887T0/1-676 VKTMSEGTLA KCGTGLSSTK GDITSEVKRV APKRQSDPSI RSVAVEPEEW ENSBTAP00000002858/1-825 VKTMSEGTLA KCGTGLSSAK GDITSEVKRV TPKRQSDPSI RSVAVEPEEW BACU011798/1-836 VKTMSEGTLA KCGTGLSSTK GDITSEVKRV APKRQSDPSI RSVAVEPEEW 451 500 ENSTTRP00000007065/1-771 LSIARKPEAS SVPSLVTALS VPTIPPAKSH AVGALNTRSA SSPVPGSSHF ENSP00000340839/1-836 LSIARKPEAS SVPSLVTALS VPTIPPPKSH AVGALNTRSA SSPVPGSSHF bmy_21887T0/1-676 LSIARKPEAS SVPSLVTALS VPTIPPPKSH AVGALNTRSA SSPVPGSSHF ENSBTAP00000002858/1-825 LSIARKPEAS SVPSLVTALS VPTIPPPKSH AVGALNTRSA SSPVPGSSHF BACU011798/1-836 LSIARKPEAS SVPSLVTALS VPTIPPPKSH AVGALNTRSA SSPVPGSSHF 501 550 ENSTTRP00000007065/1-771 SHQKSSLEHM TSMQYPPILV TNSHGTPISY SEQYPKFESL GDHGYYSMLG ENSP00000340839/1-836 PHQKASLEHM ASMQYPPILV TNSHGTPISY AEQYPKFESM GDHGYYSMLG bmy_21887T0/1-676 SHQKSSLEHM TSMQYPPILV TNSHGTPISY AEQYPKFESL GDHGYYSMLG ENSBTAP00000002858/1-825 SHQKSSLEHM TSMQYPPILV TNSHGTPISY AEQYPKFEPL GDHSYYSVLG BACU011798/1-836 SHQKSSLEHM TSMQYPPILV TNSHGTPISY AEQYPKFESL GDHGYYSMLG 551 600 ENSTTRP00000007065/1-771 DFSKLNINSM HNREYYMAET DRGLYARNPN LCPDNRMSHS RNDSYSSYNN ENSP00000340839/1-836 DFSKLNINSM HNREYYMAEV DRGVYARNPN LCSDSRVSHT RNDNYSSYNN bmy_21887T0/1-676 DFSKLNINSM HNREYYMAET DRGLYARNPN LCPDNRMSHS RNDSYSSYNN ENSBTAP00000002858/1-825 DFSKLNINSM HNREYYMAEA DRGLYARNPN LCPDNRMSHT RNDNYSSYNN BACU011798/1-836 DFSKLNINSM HNREYYMAET DRGLYARNPN LCPDNRMSHS RNDSYSSYNN 601 650 ENSTTRP00000007065/1-771 LYLAVADTHP EGSLKLHRSA SQNHLQPFPH GYHEALTRVQ SYGPEDSKQA ENSP00000340839/1-836 VYLAVADTHP EGNLKLHRSA SQNRLQPFPH GYHEALTRVQ SYGPEDSKQG bmy_21887T0/1-676 LYLAVADTHP EGSLKLHRSA SQNHLQPFPH GYHEALTRVQ SYGPEDSKQA ENSBTAP00000002858/1-825 LYLAVADTHP EGSLKLHRSA SQNHLQPFPH GYHEALTRVQ SYGPEDSKQG BACU011798/1-836 LYLAVADTHP EGSLKLHRSA SQNHLQPFPH GYHEALTRVQ SYGPEDSKQA 651 700 ENSTTRP00000007065/1-771 PNKQSVPHLV LHAQHPTTGA HSSCPGDYPM PPNIHPGATP QPGRALVMTR ENSP00000340839/1-836 PHKQSVPHLA LHAQHPSTGT RSSCPADYPM PPNIHPGATP QPGRALVMTR bmy_21887T0/1-676 PNKQSVPHLV LHAQHPTTGA HSSCPGDYPM PPNIHPGATP QPGRALVMTR ENSBTAP00000002858/1-825 PHKQSVSHLV LHAQHPTNGA RSSCPGDYPM PPNIHPGATP QPGRALVMTR BACU011798/1-836 PNKQSVPHLV LHAQHPTTGA HSSCPGDYPM PPNIHPGATP QPGRALVMTR 701 750 ENSTTRP00000007065/1-771 MDSISDSRLY ESNPMRQRRP PLCREQHASW DPLPCATDSY GYHSYPLSNS ENSP00000340839/1-836 MDSISDSRLY ESNPVRQRRP PLCREQHASW DPLPCTTDSY GYHSYPLSNS bmy_21887T0/1-676 MDSISDSRLY ESNPMRQRXP PLCREQHASW DPLPCATDSY GYHSYPLSNS ENSBTAP00000002858/1-825 MDSISDSRLY ENNPMRQRRP PLCREQHASW DPLPCATDSY GYHSYPLSNS BACU011798/1-836 MDSISDSRLY ESNPMRQRRP PLCREQHASW DPLPCATDSY GYHSYPLSNS 751 800 ENSTTRP00000007065/1-771 LMQPCYEPVM VRSVPEKMEQ LWMNPWVGMC NDSREHMIPE HQYQTYKNLC ENSP00000340839/1-836 LMQPCYEPVM VRSVPEKMEQ LWRNPWVGMC NDSREHMIPE HQYQTYKNLC bmy_21887T0/1-676 LMQPCYEPVM VRSVPEKMEQ LWMNPWVGMC NDSREHMIPE HQYQTYKNLC ENSBTAP00000002858/1-825 LMQPCYEPVM VRSVPEKMEQ LWMNPWVGMC NDSREQMIPE HQYQTYKNLC BACU011798/1-836 LMQPCYEPVM VRSVPEKMEQ LWMNPWVGMC NDSREHMIPE HQYQTYKNLC 801 850 ENSTTRP00000007065/1-771 NIFPSNIVLA VMEKNPHTAD AQQLAALIVS KLRAAR ENSP00000340839/1-836 NIFPSNIVLA VMEKNPHTAD AQQLAALIVA KLRAAR bmy_21887T0/1-676 NIFPSNIVLA VMEKNPHTAD AQQLAALIVS KLRAAR ENSBTAP00000002858/1-825 NIFPSNIVLA VMEKNPHTAD AQQLAALIVS KLRAAH BACU011798/1-836 NIFPSNIVLA VMEKNPHTAD AQQLAALIVS KLRAAR