KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:21 2014 Check: 00 .. Name: ENSTTRP00000013900/1-679 Len: 731 Check: 7293 Weight: 1.00 Name: bmy_03362T0/1-633 Len: 731 Check: 6634 Weight: 1.00 Name: ENSP00000253778/1-682 Len: 731 Check: 6927 Weight: 1.00 Name: BACU002903/1-731 Len: 731 Check: 9433 Weight: 1.00 Name: ENSBTAP00000002867/1-682 Len: 731 Check: 8238 Weight: 1.00 // 1 50 ENSTTRP00000013900/1-679 ---------- ---------- ---------- -------IFA YMNYRVPRTL bmy_03362T0/1-633 ---------- ---------- ---------- ------MKHG RQNLN-SNTK ENSP00000253778/1-682 ---------- --------MC ---------- ------GIFA YMNYRVPRTR BACU002903/1-731 MQWERSFCLR SSTLVSGNHC SLGLPETRYV SPCPTLGIFA YMNYRVPRTR ENSBTAP00000002867/1-682 ---------- --------MC ---------- ------GIFA YMNYRVPRTR 51 100 ENSTTRP00000013900/1-679 NEIFETLIKG LHRLDYRGYD SAGVAIDGNN NEVKERHIQL VKKRGNVKAL bmy_03362T0/1-633 NHVYVT---- ---------- --GVAIDGNN NEVKERHIQL VKKRGNVKAL ENSP00000253778/1-682 KEIFETLIKG LQRLEYRGYD SAGVAIDGNN HEVKERHIQL VKKRGKVKAL BACU002903/1-731 KEIFETLIRG LQRLEYRGYD SAGVAIDGNN NEVKERHIQL VKKRGNVKAL ENSBTAP00000002867/1-682 KEIFETLIKG LQRLEYRGYD SAGVAIDGNN NEVKERHIQL VKKRGNVKAL 101 150 ENSTTRP00000013900/1-679 DEELYKQDSM DLKVEFETHF GIAHTRWATH GVPNAVNSHP QRSDKGNEFV bmy_03362T0/1-633 DEELYKQDSM DLKVEFETHF GIAHTRWATH GVPNAVNSHP QRSDKGNEFV ENSP00000253778/1-682 DEELYKQDSM DLKVEFETHF GIAHTRWATH GVPSAVNSHP QRSDKGNEFV BACU002903/1-731 DEELYKQDSM DLKVEFETHF GIAHTRWATH GVPNAVNSHP QRSDKGNEFV ENSBTAP00000002867/1-682 DEELYKQDSM DLKVEFETHF GIAHTRWATH GVPSAVNSHP QRSDKGNEFV 151 200 ENSTTRP00000013900/1-679 VIHNGIITNY KDLRKFLESK GYEFESETDT ETIAKLIKYV FDNRETEDIT bmy_03362T0/1-633 VIHNGIITNY KDLRKF---- ---------- ---------- ---------- ENSP00000253778/1-682 VIHNGIITNY KDLRKFLESK GYEFESETDT ETIAKLIKYV FDNRETEDIT BACU002903/1-731 VIHNGIITNY KDLRKFLESK GYEFESETDT ETIAKLIKYV FDNRETEDIT ENSBTAP00000002867/1-682 VIHNGIITNY KDLRKFLESK GYEFESETDT ETIAKLIKYV FDNRETEDIT 201 250 ENSTTRP00000013900/1-679 FSTLVERVIQ QLEGAFALVF KSIHYPGEAV ATRRGSPLLI GVRSKYKLST bmy_03362T0/1-633 ---------- -LEGAFALVF KSIHYPGEAV ATRRGSPLLI GVRSKYKLST ENSP00000253778/1-682 FSTLVERVIQ QLEGAFALVF KSVHYPGEAV ATRRGSPLLI GVRSKYKLST BACU002903/1-731 FSTLVERVIQ QLEGAFALVF KSIHYPGEAV ATRRGSPLLI GVRSKYKLST ENSBTAP00000002867/1-682 FSTLVERVIQ QLEGAFALVF KSIHYPGEAV ATRRGSPLLI GVRSKYKLST 251 300 ENSTTRP00000013900/1-679 EQIPILYRTR NIENVKNICK TRMKRLDSST CLHAVGDKAV EFFFASDASA bmy_03362T0/1-633 EQIPILYRTR NIENVKNICK TRMKRLDSST CLHAVGDKAV EFFFASDASA ENSP00000253778/1-682 EQIPILYRTC TLENVKNICK TRMKRLDSSA CLHAVGDKAV EFFFASDASA BACU002903/1-731 EQIPILYRTR NIENVKNICK TRMKRLDSST CLHAVGDKAV EFFFASDASA ENSBTAP00000002867/1-682 EQIPVLYRTR NIENVKNICK TRMKRLDSST CLHAVGNKAV EFFFASDASA 301 350 ENSTTRP00000013900/1-679 IIEHTNRVIF LEDDDIAAVA DGKLSIHRVK RSASDDPSRA IQTLQMELQQ bmy_03362T0/1-633 IIEHTNRVIF LEDDDIAAVA DGKLSIHRVK RSASDDPSRA IQTLQMELQQ ENSP00000253778/1-682 IIEHTNRVIF LEDDDIAAVA DGKLSIHRVK RSASDDPSRA IQTLQMELQQ BACU002903/1-731 IIEHTNRVIF LEDDDIAAVA DGKLSIHRVK RSASDDPSRA IQTLQMELQQ ENSBTAP00000002867/1-682 IIEHTNRVIF LEDDDIAAVA DGKLSIHRVK RLASDDPSRA IQTLQMELQQ 351 400 ENSTTRP00000013900/1-679 IMK------- --------GN FSAFMQKEIF EQPESVFNTM RGRVNFETNT bmy_03362T0/1-633 IMKGRCPLRV PVQQPHGAGN FSAFMQKEIF EQPESVFNTM RGRVNFETNT ENSP00000253778/1-682 IMK------- --------GN FSAFMQKEIF EQPESVFNTM RGRVNFETNT BACU002903/1-731 IMKGRCPLRV PVQQPHGAGN FSAFMQKEIF EQPESVFNTM RGRVNFETNT ENSBTAP00000002867/1-682 IMK------- --------GN FSAFMQKEIF EQPESVFNTM RGRVNFETNT 401 450 ENSTTRP00000013900/1-679 VLLGGLKDHL KEIRRCRRLI VIGCGTSYHA AVATRQVLEE LTELPVMVEL bmy_03362T0/1-633 VLLGGLKDHL KEIRRCRRLI VIGCGTSYHA AVATRQVLEE LTELPVMVEL ENSP00000253778/1-682 VLLGGLKDHL KEIRRCRRLI VIGCGTSYHA AVATRQVLEE LTELPVMVEL BACU002903/1-731 VLLGGLKDHL KEIRRCRRLI VIGCGTSYHA AVATRQVLEE LTELPVMVEL ENSBTAP00000002867/1-682 VLLGGLKDHL KEIRRCRRLI VIGCGTSYHA AVATRQVLEE LTELPVMVEL 451 500 ENSTTRP00000013900/1-679 ASDFLDRNTP VFRDDVCFFI SQSGETADTL LALRYCKDRR ALTVGVTNTV bmy_03362T0/1-633 ASDFLDRNTP VFRDDVCFFI SQSGETADTL LALRYCKDRR ALTVGVTNTV ENSP00000253778/1-682 ASDFLDRNTP VFRDDVCFFI SQSGETADTL LALRYCKDRG ALTVGVTNTV BACU002903/1-731 ASDFLDRNTP VFRDDVCFFI SQSGETADTL LALRYCKDRR ALTVGVTNTV ENSBTAP00000002867/1-682 ASDFLDRNTP VFRDDVCFFI SQSGETADTL LALRYCKDRR ALTVGVTNTV 501 550 ENSTTRP00000013900/1-679 GSSISRETDC GVHINAGPEI GVASTKAYTS QFISLVMFGL MMSEDRISLQ bmy_03362T0/1-633 GSSISRETDC GVHINAGPEI GVASTKAYTS QFISLVMFGL MMSEDRISLQ ENSP00000253778/1-682 GSSISRETDC GVHINAGPEI GVASTKAYTS QFISLVMFGL MMSEDRISLQ BACU002903/1-731 GSSISRETDC GVHINAGPEI GVASTKAYTS QFISLVMFGL MMSEDRISLQ ENSBTAP00000002867/1-682 GSSISRETDC GVHINAGPEI GVASTKAYTS QFISLVMFGL MMSEDRISLQ 551 600 ENSTTRP00000013900/1-679 NRRREIIHGL RSLPXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_03362T0/1-633 NRRREIIHGL RSLPELIKEV LSLDEKIHDL ALELYTQRSL LVMGRGYNYA ENSP00000253778/1-682 NRRQEIIRGL RSLPELIKEV LSLEEKIHDL ALELYTQRSL LVMGRGYNYA BACU002903/1-731 NRRREIIHGL RSLPELIKEV LSLDEKIHDL ALELYTQRSL LVMGRGYNYA ENSBTAP00000002867/1-682 NRRREIIHGL KSLPELIKEV LSLDEKIHDL ALELYTQRSL LVMGRGYNYA 601 650 ENSTTRP00000013900/1-679 XXXXXXXKIK EITYMHSEGI LAGELKHGPL ALIDKQMPVI MVIMKDPCFA bmy_03362T0/1-633 TCLEGALKIK EITYMHSEGI LAGELKHGPL ALIDKQMPVI MVIMKDPCFA ENSP00000253778/1-682 TCLEGALKIK EITYMHSEGI LAGELKHGPL ALIDKQMPVI MVIMKDPCFA BACU002903/1-731 TCLEGALKIK EITYMHSEGI LAGELKHGPL ALIDKQMPVI MVIMKDPCFA ENSBTAP00000002867/1-682 TCLEGALKIK EITYMHSEGI LAGELKHGPL ALIDKQMPVI MVIMKDPCFA 651 700 ENSTTRP00000013900/1-679 KCQNALQQVT ARQGRPIILC SKDDTESSKF AYKTIELPHT VDCLQGILSV bmy_03362T0/1-633 KCQNALQQVT ARQGRPIILC SKDDTESSKF AYKTIKLPHT VDCLQGILSV ENSP00000253778/1-682 KCQNALQQVT ARQGRPIILC SKDDTESSKF AYKTIELPHT VDCLQGILSV BACU002903/1-731 KCQNALQQVT ARQGRPIILC SKDDTESSKF AYKTIELPHT VDCLQGILSV ENSBTAP00000002867/1-682 KCQNALQQVT ARQGRPIILC SKDDTESSKF AYKTIELPHT VDCLQGILSV 701 750 ENSTTRP00000013900/1-679 IPLQLLSFHL AVLRGYDVDF PRNLAKSVTV E bmy_03362T0/1-633 IPLQLLSFHL AVLRGYDVDF PRNLAKSVTV E ENSP00000253778/1-682 IPLQLLSFHL AVLRGYDVDF PRNLAKSVTV E BACU002903/1-731 IPLQLLSFHL AVLRGYDVDF PRNLAKSVTV E ENSBTAP00000002867/1-682 IPLQLLSFHL AVLRGYDVDF PRNLAKSVTV E