KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:22 2014 Check: 00 .. Name: BACU003187/1-120 Len: 473 Check: 4567 Weight: 1.00 Name: bmy_21482T0/1-345 Len: 473 Check: 9926 Weight: 1.00 Name: ENSP00000262554/1-473 Len: 473 Check: 759 Weight: 1.00 Name: ENSTTRP00000008149/1-473 Len: 473 Check: 1559 Weight: 1.00 Name: ENSBTAP00000002872/1-473 Len: 473 Check: 1875 Weight: 1.00 // 1 50 BACU003187/1-120 ---------- ---------- ---------- ---------- ---------- bmy_21482T0/1-345 ---------- ---------- ---------- ---------- ---------- ENSP00000262554/1-473 MATATEQWVL VEMVQALYEA PAYHLILEGI LILWIIRLLF SKTYKLQERS ENSTTRP00000008149/1-473 MATVAEQWVL VEMVQALYEA PAYHLILEGI LILWIIRLLF SKTYKLQERS ENSBTAP00000002872/1-473 MATVAEQWVL VEMVQALYEA PAYHLILEGI LILWIIRLLF SKTYKLQERS 51 100 BACU003187/1-120 ---------- ---------- ---------- ---------- ---------- bmy_21482T0/1-345 ---------- ---------- ------MPS- --------KS HNIVVNGKEG ENSP00000262554/1-473 DLTVKEKEEL IEEWQPEPLV PPVPKDHPAL NYNIVSGPPS HKTVVNGKEC ENSTTRP00000008149/1-473 DLTVKEKEEL IEEWQPEPLV PPVSKDHPAL NYNIVSGPPS HNIVVNGKEC ENSBTAP00000002872/1-473 DLTLKEKEEL IEEWQPEPLV PPVSKDHPAL NYNIVSGPPS HNIVVNGKEC 101 150 BACU003187/1-120 ---------- ---------- ---------- ---------- ----MLSME- bmy_21482T0/1-345 INFASFNFLG LLDNPRLKAA ALASLKKYGV GTCGPRGFYG TFDVHLDLED ENSP00000262554/1-473 INFASFNFLG LLDNPRVKAA ALASLKKYGV GTCGPRGFYG TFDVHLDLED ENSTTRP00000008149/1-473 INFASFNFLG LLDNPRLKAA ALASLKKYGV GTCGPRGFYG TFDVHLDLED ENSBTAP00000002872/1-473 INFASFNFLG LLDNPRLKAA ALASLKKYGV GTCGPRGFYG TFDVHLDLED 151 200 BACU003187/1-120 --------ET EVIENDG--- ---------- ---------- ---------- bmy_21482T0/1-345 RMAKCMK-KA AIIHSYGFAV IASATPACSK RGDIVSVDKA ACFAIQKGLQ ENSP00000262554/1-473 RLAKFMKTEE AIIYSYGFAT IASAIPAYSK RGDIVFVDRA ACFAIQKGLQ ENSTTRP00000008149/1-473 RLAKFMKTEE AIIYSYGFAT IASAIPAYSK RGDIVFVDKA ACFAIQKGLQ ENSBTAP00000002872/1-473 RLAKFMKTEE AIIYSYGFAT IASAIPAYSK RGDIVFVDKA ACFAIQKGLQ 201 250 BACU003187/1-120 ---------- ---------- ---------- ----ADTSLK WVMREAL--- bmy_21482T0/1-345 ASCSDSKLFN HNDTDDLEQP LKEQETEDQK NPRKACVTRR FFVVEGLYMN ENSP00000262554/1-473 ASRSDIKLFK HNDMADLERL LKEQEIEDQK NPRKARVTRR FIVVEGLYMN ENSTTRP00000008149/1-473 ASRSDIKLFN HNDMDDLDRL LKEQEIEDQK NPRKARVTRR FIVVEGLYMN ENSBTAP00000002872/1-473 ASRSDIKVFN HNDMDDLERL LKEQEIEDQK NPRKARVTRR FIIVEGLYMN 251 300 BACU003187/1-120 ---------- ---------- ---------- ------RGVT LDLGPGVSG- bmy_21482T0/1-345 TGTICPLPEL VQLKYKYKAR IFLEESLSFG VLGEHDRGVT EHFGINIDHI ENSP00000262554/1-473 TGTICPLPEL VKLKYKYKAR IFLEESLSFG VLGEHGRGVT EHYGINIDDI ENSTTRP00000008149/1-473 TGTICPLPEL VKLKYKYKAR IFLEESLSFG VLGEHGRGVT EHFGIDIDDI ENSBTAP00000002872/1-473 TGTVCPLPEL VKLKYKYKAR IFLEESLSFG VLGEHGRGVT EHFGISIDDI 301 350 BACU003187/1-120 ---------- ---------- ---------- ---------- ---------- bmy_21482T0/1-345 DLISANMENS LASVGGFCCG RSSLLLQLRP STS------- ---------- ENSP00000262554/1-473 DLISANMENA LASIGGFCCG RSFVIDHQRL SGQGYCFSAS LPPLLAAAAI ENSTTRP00000008149/1-473 DLISANMENS LASIGGFCCG RSFVIDHQRL SGQGYCFSAS LPPLLAAAAI ENSBTAP00000002872/1-473 DLISANMENS LASIGGFCCG RSFVIDHQRL SGQGYCFSAS LPPLLAAAAI 351 400 BACU003187/1-120 ---------- ---------A SRARTGESSI SGLKVVGESI SPAFHLQLEE bmy_21482T0/1-345 ---------- --WKKIQEKC KRIHKALQGI SGLKVVGEFI SPASHLLLEE ENSP00000262554/1-473 EALNIMEENP GIFAVLKEKC GQIHKALQGI SGLKVVGESL SPAFHLQLEE ENSTTRP00000008149/1-473 EALNIMEENP DIFAVLKEKC KRIHKALQGI SGLKVVGESI SPAFHLQLEE ENSBTAP00000002872/1-473 EALNIMEENP GIFAVLKEKC KRIHKALQGI PGLKVVGESI SPALHLQLEE 401 450 BACU003187/1-120 STGCRERDIK LLQEIVTQCM DRGIALTLAR YLEKEEKYLP PP--RLV--- bmy_21482T0/1-345 STGCREREVK LLQEI----- --------ER YLEKEEKYLP PLCVRVVVTG ENSP00000262554/1-473 STGSREQDVR LLQEIVDQCM NRSIALTQAR YLEKEEKCLP PPSIRVVVTV ENSTTRP00000008149/1-473 STGCRERDVK LLQEIVTQCM DRGIALTQAR YLEKEEKYLP PPSIRVVVTV ENSBTAP00000002872/1-473 TTGCRERDVK LLQEIVTQCM DRGIALTQAR YLEKEEKYLP PPSIRVVVTV 451 500 BACU003187/1-120 ---------- ---------D LKL bmy_21482T0/1-345 EQTEEELEKA VSTISKVAQT VLL ENSP00000262554/1-473 EQTEEELERA ASTIKEVAQA VLL ENSTTRP00000008149/1-473 EQTEEELEKA ATTISKVAQT VLL ENSBTAP00000002872/1-473 EQTEEDLEKA ASTISEVAQT VLL