KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:26 2014 Check: 00 .. Name: bmy_03704T0/1-260 Len: 294 Check: 4042 Weight: 1.00 Name: ENSP00000335808/1-254 Len: 294 Check: 1526 Weight: 1.00 Name: BACU001841/1-287 Len: 294 Check: 9997 Weight: 1.00 Name: ENSBTAP00000002896/1-253 Len: 294 Check: 25 Weight: 1.00 Name: ENSTTRP00000012135/1-254 Len: 294 Check: 2090 Weight: 1.00 // 1 50 bmy_03704T0/1-260 ---------- ---------- ------MALG CKKEFCPLKQ EKNQQRPCEK ENSP00000335808/1-254 ---------- ---------- ------MDGG DDGNLII--- ---KKRFVSE BACU001841/1-287 MARAKWNNFR VSNGNYFGSS NTDCSIMDGG DDGNLVI--- ---KKRFVSE ENSBTAP00000002896/1-253 ---------- ---------- ------MDGG DDGNLVI--- ---KKRFVSE ENSTTRP00000012135/1-254 ---------- ---------- ------MDGG DDGNLVI--- ---KKRFVSE 51 100 bmy_03704T0/1-260 TVLRGRGGKR QEEWEKVRKP EDPEECPEEV YDPRSLDERL QEQKDRKQQE ENSP00000335808/1-254 AELDERRKRR QEEWEKVRKP EDPEECPEEV YDPRSLYERL QEQKDRKQQE BACU001841/1-287 AELDERRKRR QEEWEKVRKP EDPEECPEEV YDPRSLDERL QEQKDRKQQE ENSBTAP00000002896/1-253 AELDERRKRR QEEWEKVRKP EDPEECPEEV YDPRSLYERL QEQKDRKQQE ENSTTRP00000012135/1-254 AELDERRKRR QEEWEKVRKP EDPEECPEEV YDPRSLYERL QEQKDRKQQE 101 150 bmy_03704T0/1-260 YEEQFKFKNM VRGLDEDETN FLDEVSLQQE LIEKQRREEE LKELKEY--- ENSP00000335808/1-254 YEEQFKFKNM VRGLDEDETN FLDEVSRQQE LIEKQRREEE LKELKEY--- BACU001841/1-287 YEEQFKFKNM VRGLDEDETN FLDEVSRQQE LIEKQRR-EE LTELKEYGSR ENSBTAP00000002896/1-253 YEEQFKFKNM VRGLDEDETN FLDEVSRQQE LIEKQRREEE LKELKEY--- ENSTTRP00000012135/1-254 YEEQFKFKNM VRGLDEDETN FLDEVSRQQE LIEKQRREEE LKELKEY--- 151 200 bmy_03704T0/1-260 -----RSNLN KVGISQENKK EVEKKVAVKP TETKTKFSQA KLLAGAVKHK ENSP00000335808/1-254 -----RNNLK KVGISQENKK EVEKKLTVKP IETKNKFSQA KLLAGAVKHK BACU001841/1-287 RIWFKTSNLN KVGISQDNKK EVEKKVAVKP TETKTKFSQA KLLAGAVKHK ENSBTAP00000002896/1-253 -----RSNLN KVGISSENKK EVEKK-AVKP IETKNKFSQA KLLAGAVKHK ENSTTRP00000012135/1-254 -----RSNLS KVGISQENKK EVEKKVAVKP TETKTKFSQA KLLAGAVKHK 201 250 bmy_03704T0/1-260 SSESGNGVKR LKSDPDPDDK NQEAPSCVSL GSTSLSGPSI HCPSAAVCIG ENSP00000335808/1-254 SSESGNSVKR LKPDPEPDDK NQEPSSCKSL GNTSLSGPSI HCPSAAVCIG BACU001841/1-287 SSESGNSLKR LKSDPDPDDK NQEAPSCVSL GSTSLSGPSI HCPSAAVCIG ENSBTAP00000002896/1-253 SSESGNSVKR LKSDPDPDDK NQEASSCVSL GSTSLSSPSI HCPSAAVCIG ENSTTRP00000012135/1-254 SSESGNSVKR LKSDSDPDDK NQEAPSCVSL GSTSLSGPSI HCPSAAVCIG 251 300 bmy_03704T0/1-260 ILPGLGAYSG SSDSESSSDS EGTINATGKM VSSIFRTNTF LEDP ENSP00000335808/1-254 ILPGLGAYSG SSDSESSSDS EGTINATGKI VSSIFRTNTF LEAP BACU001841/1-287 ILPGLGAYSG SSDSESSSDS EGTINATGKI VSSIFRTNTF LEAP ENSBTAP00000002896/1-253 ILPGLGAYSG SSDSESSSDS EGTINATGKI VSSIFRTNTF LEAP ENSTTRP00000012135/1-254 ILPGLGAYSG SSDSESSSDS EGTINATGKI VSSIFRTNTF LEAP