KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:26 2014 Check: 00 .. Name: ENSP00000366452/1-342 Len: 459 Check: 9987 Weight: 1.00 Name: ENSBTAP00000002897/1-345 Len: 459 Check: 1129 Weight: 1.00 Name: bmy_10199T0/1-434 Len: 459 Check: 6598 Weight: 1.00 Name: BACU005311/1-374 Len: 459 Check: 3921 Weight: 1.00 Name: ENSTTRP00000000305/1-338 Len: 459 Check: 206 Weight: 1.00 // 1 50 ENSP00000366452/1-342 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002897/1-345 ---------- ---------- ---------- ---------- ---------- bmy_10199T0/1-434 TSPILILKSL SSCFTNNRGL FRRSLGQAPW PRNCTVTCDQ LPGPEDERRR BACU005311/1-374 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000305/1-338 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000366452/1-342 ---------- ---------- ---------- -----MSRQA KDDFLRHYTV ENSBTAP00000002897/1-345 ---------- ---------- ---------- -----MSRQA KDDFLRHYTV bmy_10199T0/1-434 PGRGCGXRRL TWRGRGGGGV EEAEAGGQLC SSSIAMSRQA KDDFLRHYTV BACU005311/1-374 ---------- ---------- ---------- -----MSRQA KDDFLRHYKV ENSTTRP00000000305/1-338 ---------- ---------- ---------- -----MSRQA KDDFLRHYTV 101 150 ENSP00000366452/1-342 SDPRTHPKGY TEYKVTAQFI SKKDPEDVKE VVVWKRYSDF RKLHGDLAYT ENSBTAP00000002897/1-345 SDPRTHPKGY TEYKVTAQFI SKRDPEDVKE VVVWKRYSDF RKLHGDLAYT bmy_10199T0/1-434 SDPRTHPKGY TEYKVTAQFI SKRDPEDVKE VVVWKRYSDF RKLHGDLAYT BACU005311/1-374 SEPRTHPKGY TEYKVTAQFI SKRDPEDVKE VVVWKRYSDF RKLHGDLAYT ENSTTRP00000000305/1-338 SDPRTHPKGY TEYKVTAQFI SKRDPEDVKE VVVWKRYSD- RKLHGDLAYT 151 200 ENSP00000366452/1-342 HRNLFRRLEE FPAFPRAQVF GRFEASVIEE RRKGAEDLLR FTVHIPALNN ENSBTAP00000002897/1-345 HRNLFRRLEE FPAFPRGQVF GRFEASVIEE RRKGAEDLLR FTVHIPALNN bmy_10199T0/1-434 HRNLFRRLEE FPAFPRAQVF GRFEASVIEE RRKGAEDLLR FTVHIPALNN BACU005311/1-374 HRNLFRRLEE FPAFPRAQVF GRFEASVIEE RRKGAEDLLR FTVHIPALNN ENSTTRP00000000305/1-338 HR-LF-RLEE -PAFPRAQVF GRFEASVIEE RRKGAEDLLR FTVHIPALNN 201 250 ENSP00000366452/1-342 SPQLKEFFRG GEVTRPLEVS RDLHILPPPL IPTPPPDDPR -------LSQ ENSBTAP00000002897/1-345 SPQLKEFFRG GEVTRPSEVS GDLHILPPPL IPTPPPDEPR VQPHETWLPQ bmy_10199T0/1-434 SPQLKEFFRG GEVTRPSEMS RDVHILPPPL IPTPPPDEPR VQPHEPWLPQ BACU005311/1-374 SPQLKEFFRG GEVTRPSEMS RDVHILPPPL IPTPPPDEPR VQPHEPWLPQ ENSTTRP00000000305/1-338 SPQLKEFFRG GEVTRPSEMS RDVHILPPPL IPTPPPDEPR -------LPQ 251 300 ENSP00000366452/1-342 LLPAERRGLE ELEVPVDPPP SSPAQEALDL LFNCESTEEA SGSPARGPLT ENSBTAP00000002897/1-345 PLPAERRGLE ELEVPADPPP SSPAQEALDL LFNCGSTEEA SSSPARGPLT bmy_10199T0/1-434 PLPTERRGLE ELEVPVDPLP SSPAQEALDL LFNCGSTEEA SSSPGRGPLT BACU005311/1-374 PLPAERRGLE ELEVPVDPLP SSPAQEALDL LFNCGSTEEA SSSPGRGPLT ENSTTRP00000000305/1-338 PLPAERRGLE ELEVPVDPLP SSPAQEALDL LFNCGSTEEA SSSPGRGPLT 301 350 ENSP00000366452/1-342 EAELALFDPF SKE------- ---------- --------EG AAPSPTHVAE ENSBTAP00000002897/1-345 EAELALFDPF SKE------- ---------- --------EG AGPSPTHIGE bmy_10199T0/1-434 EAELALFDPF SKE------- ---------- --------EG VGPSPTHMGE BACU005311/1-374 EAELALFDPF SKEALGKGKK GLEGKGKSGV TMADEPATEG VGPSPTHMGE ENSTTRP00000000305/1-338 EAELALFDPF SKE------- ---------- --------EG VGPSPTHMGE 351 400 ENSP00000366452/1-342 LATMEVESAR LDQEPWEPGG QEEEEDGEGG PTPAYLSQAT ELITQALRDE ENSBTAP00000002897/1-345 LAALEAGSGR PDQEPWEPGG QAEEDDEEGE PAPAYLSQAT ELITQALRDE bmy_10199T0/1-434 LAALEAESER LDQEPWEPGG QAEEEDEEGG PAPAYLSEAT ELITQALRDE BACU005311/1-374 LAALEAESER LDQEPWEPGG QAEEEDEEGG PAPAYLSEAT ELITQALRDE ENSTTRP00000000305/1-338 LAALEAESER LDQEPWEPGG QAEEEDEEGG PAPAYLSEAT ELITQALRDE 401 450 ENSP00000366452/1-342 KAGAYAAALQ GYRDGVHVLL QGVPSDPLPA RQEGVKKKAA EYLKRAEEIL ENSBTAP00000002897/1-345 KAGAYPAALQ GYRDGVHILL QGVPGDPSPA RREGVKKKAA EYLKRAEEIL bmy_10199T0/1-434 KAGAYPAALQ GYRDGVHILL QGVPGDPSPA RREGVKKKAA EYLRRAEEIL BACU005311/1-374 KAGAYPAALQ GYRDGVHILL QGVPGDPSPA RREGVKKKAA EYLKRAEEIL ENSTTRP00000000305/1-338 KAGAYPAALQ GYRDGVHILL QGVSGDPSPA RREGVKKKAA EYLKRAEEIL 451 500 ENSP00000366452/1-342 RLHLSQLPP ENSBTAP00000002897/1-345 HLHLS---- bmy_10199T0/1-434 HLHLSQLPP BACU005311/1-374 HLHLSQLPP ENSTTRP00000000305/1-338 HLHLSQLPP