KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:26 2014 Check: 00 .. Name: ENSP00000252037/1-327 Len: 327 Check: 1199 Weight: 1.00 Name: ENSBTAP00000002909/1-326 Len: 327 Check: 5056 Weight: 1.00 Name: ENSTTRP00000002516/1-325 Len: 327 Check: 3101 Weight: 1.00 Name: bmy_00361T0/1-200 Len: 327 Check: 9896 Weight: 1.00 Name: BACU012029/1-302 Len: 327 Check: 518 Weight: 1.00 // 1 50 ENSP00000252037/1-327 MGGSALNQGV LEGDDAPGQS LYERLSQRML DISGDRGVLK DVIREGAGDL ENSBTAP00000002909/1-326 -MSSSRPLNG LSRLDAEDRS PYQRLSQRML DISGDRGVLK DVIREGAGEL ENSTTRP00000002516/1-325 MGGSTRSPGV LQRDDASSQS RYQRLSQRML DLSGDRGVLK DVIREGSGEL bmy_00361T0/1-200 MGGSARNPGV LQRDDAPSQS PYQRLSQRML DLSGDRGVLK DVIREGSGEL BACU012029/1-302 MGGSARNPGV LQRDDAPSQS PYQRLSQRML DLSGDRGVLK DVIREGSGEL 51 100 ENSP00000252037/1-327 VAPDASVLVK YSGYLEHMDR PFDSNYFRKT PRLMKLGEDI TLWGMELGLL ENSBTAP00000002909/1-326 VTPDASVLVK YSGYLEHMDK PFDSNCFRKT PRLMKLGEDI TLWGMELGLL ENSTTRP00000002516/1-325 VTPDASVLVK YSGYLEHMDK PFDSNCFRKT PRLMKLGEDI TLWGMELGLL bmy_00361T0/1-200 VTPDATVLVK YSGYLEHMDK PFDSNCFRKT PRLMKLGEDI TLWGMELGLL BACU012029/1-302 VTPDASVLVK YSGYLEHMDK PFDSNCFRKT PRLMKLGEDI TLWGMELGLL 101 150 ENSP00000252037/1-327 SMRRGELARF LFKPNYAYGT LGCPPLIPPN TTVLFEIELL DFLDCAESDK ENSBTAP00000002909/1-326 SMRRGELARF LFKPTYAYGT LGCPPLIPPN TTVLFEIELL DFLDSAESDK ENSTTRP00000002516/1-325 SMRRGEVARF LFKPTYAYGM LGCPPLIPPN ATVLFEIELL DFLDSAESDK bmy_00361T0/1-200 SMRRGELARF LFKPTYAYGM LGCPPLIPPN TTVLFEIELL DFLDSAESDK BACU012029/1-302 SMRRGELARF LFKPTYAYGM LGCPPLIPPN TTVLFEIELL DFLDSAESDK 151 200 ENSP00000252037/1-327 FCALSAEQQD QFPLQKVLKV AATEREFGNY LFRQNRFYDA KVRYKRALLL ENSBTAP00000002909/1-326 FCALSAEQQS QFPLQKVLKV AATEREFGNY LFRQNRFYDA KVRYKRALLL ENSTTRP00000002516/1-325 FCVLSAEQQD QFPLQKVLKV AATEREFGNY -FRQNRXXXX XXXXXXALLL bmy_00361T0/1-200 FCALSAEEQD QFPLQKVLKV AATEREFGNY LFRQNRFYDA KVRYKRVRLL BACU012029/1-302 FCALSAEQQD QFPLQKVLKV AATEREFGNY LFRQNRFYDA IVRYKQALLL 201 250 ENSP00000252037/1-327 LRRRSAPPEE QHLVEAAKLP VLLNLSFTYL KLDRPTIALC YGEQALIIDQ ENSBTAP00000002909/1-326 LHRRTAPPEE QHLVETAKLL VFLNLSFTYL KLERPTMALR YGEQALIIDR ENSTTRP00000002516/1-325 LHRRSAPAEE QLLVETAKLL VLLNLSFTYL KLERPTMALR YGEQALVIDQ bmy_00361T0/1-200 ---------- ---------- ---------- ---------- ---------- BACU012029/1-302 LHRRSVPLEE QHLVETAKLL VLLNLSFTYL KLERPAA--- ---------- 251 300 ENSP00000252037/1-327 KNAKALFRCG QACLLLTEYQ KARDFLVRAQ KEQPFNHDIN NELKKLASCY ENSBTAP00000002909/1-326 KNAKALFRCG QACLLMTEYQ KARDFLVRAQ REQPFNHDIN NELKKLASYY ENSTTRP00000002516/1-325 KNTKALFRCG Q-CLLMTEYQ KARDFLVRAQ KEQPFNHDIN NELKKLASYY bmy_00361T0/1-200 ---------- ---------- ---------- ---------- ---------- BACU012029/1-302 ---------- --CLLMTEYQ KARDFLVRAQ KEQPFNHDIN NELKKLASYY 301 350 ENSP00000252037/1-327 RDYVDKEKEM WHRMFAPCGD GSTAGES ENSBTAP00000002909/1-326 RDYMDKEREM CHRMFASGDN GSTVGEN ENSTTRP00000002516/1-325 SDYLGKEKEM CHRMFAPGAH GSTVGEN bmy_00361T0/1-200 ---------- ---------- ------- BACU012029/1-302 RDYMGKEKEM CHRMFAPGEH GSTVGEN