KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:29 2014 Check: 00 .. Name: ENSTTRP00000003813/1-515 Len: 516 Check: 1062 Weight: 1.00 Name: ENSBTAP00000002932/1-516 Len: 516 Check: 2425 Weight: 1.00 Name: bmy_16074T0/1-490 Len: 516 Check: 1159 Weight: 1.00 Name: BACU018834/1-471 Len: 516 Check: 2794 Weight: 1.00 // 1 50 ENSTTRP00000003813/1-515 MKEAGQMQNL ESEGAGRSVS TQTGSMTGEI PRLSKVNLFT LLSLWMELFP ENSBTAP00000002932/1-516 MREAGQMQNL ESAGAGRSVS TQTGSMTGEI PRLSKVNLFT LLSLWMELFP bmy_16074T0/1-490 MKEAGQMQNL ESEGAGRSVS TQTGSMTGEI PRLSKVNLFT LLSLWMELFP BACU018834/1-471 MKEAGQMQNL ESEGAGRSVS TQTGSMTGEI PRLSKVNLFT LLSLWMELFP 51 100 ENSTTRP00000003813/1-515 SVKSQRQKSQ EREEGKH-GP LGGNEEMARV STDKKQVKRT GLVVVKNMKI ENSBTAP00000002932/1-516 AVKTQRQKSQ SKTSNPSPAP LSKNHTFTRL FIRKKKVKRT GLVVVKNMKI bmy_16074T0/1-490 AVKSQRQKSQ ---------- ---------- ------VKRT GLVVVKNMKI BACU018834/1-471 AVKSQRQKSQ EREEGKH-GP LGDNEEMARV STDKKQVKRT GLVVVKNMKI 101 150 ENSTTRP00000003813/1-515 VGLHCSSEDL HAGKIALIKH GSRLKNCDLY FSRKPCSACL KMIVNAGVNR ENSBTAP00000002932/1-516 VGLHCSSEDL HAGKIALIKH GSKLKNCDLY FSRKPCSACL KMIVNAGVNR bmy_16074T0/1-490 VGLHCSSEDL HAGKIALIKH GSRLKNCDLY FSRKPCSACL KMIVNAGVNR BACU018834/1-471 VGLHCSSEDL HAGKIALIKH GSRLKNCDLY FSRKPCSACL KMIVNAGVNR 151 200 ENSTTRP00000003813/1-515 ISYWPADPEI SLLTEASSSE DAKLDAKAVE RLKSNSRAHV CVLLQPLVCY ENSBTAP00000002932/1-516 ISYWPADPEI SLLTEASGFE DAKLDAKAVE RLKSNSRAHV CVLLQPLVCY bmy_16074T0/1-490 ISYWPADPEI SLLTEASSSE DAKLDAKAVE RLKSNSRAHV CVLLQPLVCY BACU018834/1-471 ISYWPADPEI SLLTEASSSE DAKLDAKAVE RLKSNSRAHV CVLLQPLVCY 201 250 ENSTTRP00000003813/1-515 MMQFVEETSY KCDFIQKISK TLPDTTIDFY SECKQERIKE YEMIFLVSGE ENSBTAP00000002932/1-516 MVQFVEETSY KCDFIQKISK TLPDTNFDFY SECKQERIKE YEMIFLVSNE bmy_16074T0/1-490 MVQFVEETSY KCDFIQKISK TLPDTNIDFY SECKQERIKE YEKIFLVSRE BACU018834/1-471 MVQFVEETSY KCDFIQKISK TLPDTNIDFY SECKQERIKE YEMIFLVSRE 251 300 ENSTTRP00000003813/1-515 EMHKQILMTI GLENLCENPY FSNLRQNMKD LILLLATVAS SVPNFKHYGF ENSBTAP00000002932/1-516 EMHKQILMTI GLENLCENPY FSNLRQNMKD LVLLLAAVAS SVPNFKHYGF bmy_16074T0/1-490 EMHKQILMTI GLENLCENPY FSNLRQNMKD LILLLATVAS SVPNFKHYGF BACU018834/1-471 EMHKQILMTI GLENLCENPY FSNLRQNMKD LILLLATVAS SVPNFKHYGF 301 350 ENSTTRP00000003813/1-515 YCSNTEQINE IHNQSLPQEI ARHCMVQARL LAYRTEDHKI GVGAVIWAEG ENSBTAP00000002932/1-516 YCGNTEHSNE IHNQSLPQEI ARHCMIQARL LAYRTEDHKT GVGAVIWAEG bmy_16074T0/1-490 YCSNTEQINE IHNQSLPQEI ARHCMIQARL LACRTEDHKI GVGAVIWAEG BACU018834/1-471 YCSNTEQINE IHNQSLPQEI ARHCMIQARL LAYRTEDHKT GVGAVIWAEG 351 400 ENSTTRP00000003813/1-515 KSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000002932/1-516 KSRSCDGTGA MYFIGCGYNA FPVGSEYADF PHMDDKQKDR EIRKFRYIVH bmy_16074T0/1-490 KSRSCDGTGA MYFIGCGYNA FPVGSEYADF PHMDDKQKDR EIRKFRYIVH BACU018834/1-471 KSRSCDGTGA MYFIGCGYNA FPVGSEYADF PHMDDKQKDR EIRKFRYIVH 401 450 ENSTTRP00000003813/1-515 XXXXXXXXXC QEIKPEERSM IFVTKCPCDE CVPLIKGAGI KQIYSGDADV ENSBTAP00000002932/1-516 AEQNALTFRC QEIKPEERSM IFVTKCPCDE CVPLIKGAGI KQIYAGDVDV bmy_16074T0/1-490 AEQNALTFRC QEIKPEERSM IFVTKCPCDE CVPLIKGAGI KQIYAGDVDV BACU018834/1-471 AEQNALTFRC QEIKPEERSM IFVTKCPCDE CVPLIKGAGI KQIYAGDVDV 451 500 ENSTTRP00000003813/1-515 GKKKADISYM RFGELEGVSK FTWQMNPSRT CVLEQNEPES RENGVLGPIP ENSBTAP00000002932/1-516 GKKKADISYM RFGEVEGVSK FTWQLNPSRT GVLEQNEPES RENGVLGSVA bmy_16074T0/1-490 GKKKADISYM RFGELEGVSK FTWQLNPSRT CVLEQNEPES RENGVLGPIP BACU018834/1-471 GKKKADISYM RFGELEGVSK FT-------- ---------- ---------- 501 550 ENSTTRP00000003813/1-515 RDEEQHQNKK LRLANH ENSBTAP00000002932/1-516 LDEEPHQNKK LRLANH bmy_16074T0/1-490 QDEEQHQNKK LRLANH BACU018834/1-471 ---------- ------