KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:30 2014 Check: 00 .. Name: ENSP00000252674/1-559 Len: 634 Check: 8658 Weight: 1.00 Name: bmy_06924T0/1-519 Len: 634 Check: 7849 Weight: 1.00 Name: ENSBTAP00000002936/1-592 Len: 634 Check: 3124 Weight: 1.00 Name: BACU002577/1-617 Len: 634 Check: 8199 Weight: 1.00 Name: ENSTTRP00000002188/1-552 Len: 634 Check: 7524 Weight: 1.00 // 1 50 ENSP00000252674/1-559 ---------- ---------- ---------- ---------- --MDNQCTVQ bmy_06924T0/1-519 ---------- ---------- ---------- ---------- --------MR ENSBTAP00000002936/1-592 -----MSVAS GPGTSLSLTG H-TVLFSGDL GERYCSGRAA NLRAEQCTVQ BACU002577/1-617 MCVRRAAWLP RPRVHLHLCP QLASHLPRIL TVNHCSALKT KPAFVQCTVQ ENSTTRP00000002188/1-552 ---------- ---------- ---------- ---------- ------CTVQ 51 100 ENSP00000252674/1-559 VRLELGHRAQ LRKKPTTEGF THDWMVFVRG PEQCDIQHFV EKVVFWLHDS bmy_06924T0/1-519 VRGERGAGPA ARSASA---- ---W------ ---------- ---------- ENSBTAP00000002936/1-592 VKLELGHRAQ LRKKPTTEGF THDWMVFVRG PEQCEIQHFV EKVVFRLHDS BACU002577/1-617 VKLELGHRAQ LRKKPTTEGF THDWMVFVRG PEQCEIQHFV EKVVFRLHDS ENSTTRP00000002188/1-552 VKLELGHRAQ LRKKPTTEGF THDWMVFVRG PEQCEIQHFV EKVVFRLHDS 101 150 ENSP00000252674/1-559 FPKPRRVCKE PPYKVEESGY AGFIMPIEVH FKNKEEPRKV CFTYDLFLNL bmy_06924T0/1-519 ---PVAALQP PAHPAEWTSL FSLF------ ---KEEPRKV CFTYDLFLNL ENSBTAP00000002936/1-592 FPKPKRVCKE PPYKVEESGY AGFIMPIEVY FKNKEEPRKV CFTYDLFLNL BACU002577/1-617 FPKPKRVCKE PPYKVEESGY AGFIMPIEVY FKNKEEPRKV CFTYDLFLNL ENSTTRP00000002188/1-552 FPKPKRVCKE PPYKVEESGY AGFIMPIEVY FKNKEEPRKV CFTYDLFLNL 151 200 ENSP00000252674/1-559 EGNPPVNHLR CEKLTFNNPT TEFRYKLLRA GGVMVMPEGA DTVSRPSPDY bmy_06924T0/1-519 EGNPPVNHLR CEKLTFNNPT VEFRYKLLMA GGVMVMPEGA ETVSRPSPDY ENSBTAP00000002936/1-592 EGNPPVNHLR CEKLTFNNPT VEFRYKLLMA GGVMVIPEGA ETVSRPSPDY BACU002577/1-617 EGNPPVNHLR CEKLTFNNPT VEFRYKLLMA GGVMVMPEGA ETVSRPSPDY ENSTTRP00000002188/1-552 EGNPPVNHLR CEKLTFNNPT VEFRYKLLMA GGVMVMPEGA ETVSRPSPDY 201 250 ENSP00000252674/1-559 PMLPTIPLSA FSDPKKTKPS HGSKDANKES SKTSKPHKVT KEHRERPRKD bmy_06924T0/1-519 PMLPTIPLSA FSDPKKTKPS HGSKDASRES GKACKAHKTT KEHRERPRKD ENSBTAP00000002936/1-592 PMLPTIPLSA FSDPKKTKPS HGSKDASKES SKACKAHKAT KEHRERPRKD BACU002577/1-617 PMLPTIPLSA FSDPKKTKPS HGSKDASRES GKACKAHKTT KEHRERPRKD ENSTTRP00000002188/1-552 PMLPTIPLSA FSDPKKTKPS HGSKDASRES GKACKAHKTT KEHRERPRKD 251 300 ENSP00000252674/1-559 SESKSSSKEL EREQAKSSKD TSRKLGEGRL PKEEKAPPPK AAFKEPKMAL bmy_06924T0/1-519 SESRGASKEP EREQARSAKD AARKLGEGRP PKEEKAPPPK AAFKEPKMAL ENSBTAP00000002936/1-592 SESRGTSKEP EREQARSAKD AARKLGEGRP PKEEKAPPPK AAFKEPKMAL BACU002577/1-617 SESRGASKEP EREQARSAKD AARKLGEGRP PKEEKAPPPK AAFKEPKMAL ENSTTRP00000002188/1-552 SESRGACKEP EREQARSAKD AARKLGEGRP PKEDKAPPPK AAFKEPKMAL 301 350 ENSP00000252674/1-559 KETKLESTSP KGGPPPPPPP PPRASSKRPA TADSPKPSAK KQKKSSSKGS bmy_06924T0/1-519 KETKLESMSP KGG--PPPPP PPKSSSKRPA AADSPKPSAK KQKKSSSKGS ENSBTAP00000002936/1-592 KETKLEGMSP KGG--PPPPP PPKSSSKRPA TADSPKPSAK KQKKSSSKGS BACU002577/1-617 KETKLESMSP KGG--PPPPP PPKSSSKRPA AADSPKPSAK KQKKSSSKGS ENSTTRP00000002188/1-552 KETKLESMSP KGG--PPPPP PPKSSSKRPA AADSPKPSAK KQKKSSSKGS 351 400 ENSP00000252674/1-559 RSAPGTSPRT SSSSSFSDKK PAKDKSSTRG EKVKAESEPR EAKKALEVEE bmy_06924T0/1-519 RSAPSTSPRT -SSSSFSDKK PAKDKGSAKG EKVKAENEPR EIKKPPEVEE ENSBTAP00000002936/1-592 RSAPSTSPRT -SSSSFSDKK PAKDKGSTKG EKVKAENESR EIKKPPEVEE BACU002577/1-617 RSAPSTSPRT -SSSSFSDKK PAKDKGTAKG EKVKAENEPR EIKKPPEVEE ENSTTRP00000002188/1-552 RSAPSTSPRT -SSSSFSDKK PAKDKGGAKA EKVKPENEPR EIKKPPEAEE 401 450 ENSP00000252674/1-559 SNSEDEASFK SE-------- ---------- -SAQSSPSNS SSSSDSSSDS bmy_06924T0/1-519 SNSEDEASFK TE-------- ---------- -SAQSSPSNS TSSSDSSSDS ENSBTAP00000002936/1-592 SNSEDEASFK TE-------- ---------- -SAQSSPSNS SSSSDSSSDS BACU002577/1-617 SNSEDEASFK TEMTVVLSPC CPACPAVRGV KSAQSSPSNS SSSSDSSSDS ENSTTRP00000002188/1-552 SNSEDEASFK TE-------- ---------- -SAQSSPSNS SSSSDSSSDS 451 500 ENSP00000252674/1-559 DFEPSQNHSQ GPLRSMVEDL QSEESDEDDS SSGEEAAGKT NPGRDSRLSF bmy_06924T0/1-519 DFEPSQNHSQ GPLRSMVEDL QSEESDEDDS SSGEEAAGKT NAGRDSRLSF ENSBTAP00000002936/1-592 DFEPSQNHSQ GPLRSMVEDL QSEESDEDDS SSGEEAAGKT NAGRDSRLSF BACU002577/1-617 DFEPSQNQNQ GPLRSMVEDL QSEESDEDDS SSGEEAAGKT NAGRDSRLSF ENSTTRP00000002188/1-552 DFEPSQNHSQ GPLRSMVEDL QSEESDEDDS SSGEEAAGKT NAGRDSRLSF 501 550 ENSP00000252674/1-559 SDSESDNSAD SSLPSREPPP PQKPPPPNSK VSGRRSPESC SKPEKILKKG bmy_06924T0/1-519 SDSESDNSAD SCLPSREPPP PKKPPPPNSK TSGRRSPEPC SKPEKILKRG ENSBTAP00000002936/1-592 SDSESDNSGD SCLPSREPPP PKKPPPPNSK ASGRRSPEPC GKPEKILKRG BACU002577/1-617 SDRKSDNSAD SCLPSREPPP PKKPPPPNSK TSGRRSPEPC SKPEKILKRG ENSTTRP00000002188/1-552 SDSESDNSAD SCLPSREPPP PKKPPPPNSK TSGRRSPEPC SKPEKILKRG 551 600 ENSP00000252674/1-559 TYDKA----- ---------Y TDELVELHRR LMALRERNVL QQIVNLIEET bmy_06924T0/1-519 AYDKGGAGPP AERVSVRQAY TDELVELHRR LMALRERNVL QQIVNLIEET ENSBTAP00000002936/1-592 TYDKA----- ---------Y TDELVELHRR LMALRERNVL QQIVNLIEET BACU002577/1-617 AYDKA----- ---------Y TDELVELHRR LMALRERNVL QQIVNLIEET ENSTTRP00000002188/1-552 AYDKA----- ---------Y TDELVELHRR LMALRERNVL QQIVNLIEET 601 650 ENSP00000252674/1-559 GHFNVTNTTF DFDLFSLDET TVRKLQSCLE AVAT bmy_06924T0/1-519 GHFNVTNTTF DFDLFSLDET TVRKLQSYLE AVAT ENSBTAP00000002936/1-592 GHFNVTNTTF DFDLFSLDET TVRKLQSYLE AVAT BACU002577/1-617 GHFNVTNTTF DFDLFSLDET TVRKLQSYLE AVAT ENSTTRP00000002188/1-552 GHFNVTNTTF DFDLFSLDET TVRKLQSYLE AVAT