KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:35 2014 Check: 00 .. Name: ENSTTRP00000003525/1-358 Len: 492 Check: 6482 Weight: 1.00 Name: BACU004121/1-492 Len: 492 Check: 6752 Weight: 1.00 Name: ENSP00000302843/1-358 Len: 492 Check: 1108 Weight: 1.00 Name: ENSBTAP00000002952/1-358 Len: 492 Check: 541 Weight: 1.00 Name: bmy_07873T0/1-236 Len: 492 Check: 7322 Weight: 1.00 // 1 50 ENSTTRP00000003525/1-358 ---------- ---------- ---------- ---------- ---------- BACU004121/1-492 MGSVGETQLC WAILGFLLLQ DTSHNVTSKL PTMSLRTRED STILPSPTSE ENSP00000302843/1-358 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002952/1-358 ---------- ---------- ---------- ---------- ---------- bmy_07873T0/1-236 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003525/1-358 ---------- ---------- ---------- ---------- ---------- BACU004121/1-492 TVLTVAAFGV ISFIAILVVV VIILVSVVSL RFKCRKNKES EDPQKPGSSG ENSP00000302843/1-358 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002952/1-358 ---------- ---------- ---------- ---------- ---------- bmy_07873T0/1-236 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003525/1-358 --MAATLGSG ERWT------ ---------- ---------- ------EAYI BACU004121/1-492 LSESCSTANG EKDSITLISM KNINMNNSKG CPSAEKSVLA ALGPPFVAYI ENSP00000302843/1-358 --MAATLGSG ERWT------ ---------- ---------- ------EAYI ENSBTAP00000002952/1-358 --MAATLGSG ERWT------ ---------- ---------- ------EAYI bmy_07873T0/1-236 ---------M DR-------- ---------- ---------- ---------- 151 200 ENSTTRP00000003525/1-358 DAVRRNKYPE DRPPESHDPC GCCNCRKAQK EKKSEHEWNQ TRQGEGSATY BACU004121/1-492 DAVRRNKYPE DRPPESHDPC GCCNCRKAQK EKKSEHEWNQ TRQGEGNATY ENSP00000302843/1-358 DAVRRNKYPE DTPPESHDPC GCCNCMKAQK EKKSENEWTQ TRQGEGNSTY ENSBTAP00000002952/1-358 DAVRRNKYPE DRPPESHDPC GCCNCMKGQK EKKSENEWSQ TRQGEGNSTY bmy_07873T0/1-236 ---REIGFP- ---------- --CAALK--- ---------- ---------- 201 250 ENSTTRP00000003525/1-358 TGEQLLGVQR IKKCRNYYEI LGVSRNASDE ELKKAYRKLA LKSHPDKNCA BACU004121/1-492 TEEQLLGVQR IKKCRNYYEI LGVSRNASDE ELKKAYRKLA LKFHPDKNCA ENSP00000302843/1-358 SEEQLLGVQR IKKCRNYYEI LGVSRDASDE ELKKAYRKLA LKFHPDKNCA ENSBTAP00000002952/1-358 TEEQLLGVQR IKKCRNYYEI LGVSRDASDE ELKKAYRKLA LKFHPDKNCA bmy_07873T0/1-236 --------PR IKKCRNYYEI LGVSRNASDE ELKKAYRKLA LKFHPDKNCA 251 300 ENSTTRP00000003525/1-358 PGATDAXXXI GNAFAVLSNP DKRLRYDEYG DEQVTFTTPR ARPYNYYRDF BACU004121/1-492 PGATDAFKAI GNAFAVLSNP EKRLRYDEYG DEQVTFTTPR ARPYNYYRDF ENSP00000302843/1-358 PGATDAFKAI GNAFAVLSNP DKRLRYDEYG DEQVTFTAPR ARPYNYYRDF ENSBTAP00000002952/1-358 PGATDAFKAI GNAFAVLSNP DKRLRYDEYG DEQVTFTAPR ARPYNYYRDF bmy_07873T0/1-236 PGATDAFK-- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000003525/1-358 EADITPEELF NVFFGGHFPT XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU004121/1-492 EADITPEELF NVFFGGHFPT GNIHMFSNVT DDPHYYRRRH RHERMQTRKE ENSP00000302843/1-358 EADITPEELF NVFFGGHFPT GNIHMFSNVT DDTYYYRRRH RHERTQTQKE ENSBTAP00000002952/1-358 ETDITPEELF NVFFGGHFPT GNIHMFSNVT DDTHYYRRRH RHERMQTRKE bmy_07873T0/1-236 ---------- ---------- GNIHMFSNVT DDPHYYRRRH RHERMQTRKE 351 400 ENSTTRP00000003525/1-358 XXXXXXXTTY SAFIQLLPVL VIVIISVITQ LLAANPPYSL FYKSTLGYTI BACU004121/1-492 EEEDKPQTTY SAFIQLLPVL VIVIISVITQ LLAANPPYSL FYKSTLGYTI ENSP00000302843/1-358 EEEEKPQTTY SAFIQLLPVL VIVIISVITQ LLATNPPYSL FYKSTLGYTI ENSBTAP00000002952/1-358 EEEDKPQTTY SAFIQLLPVL VIVIISVITQ LLAANPPYSL FYKSTLGHTI bmy_07873T0/1-236 EEEDKPQTTY SAFIQLLPVL VIVIISVITQ LLAANPPYSL FYKSTLGYTI 401 450 ENSTTRP00000003525/1-358 SRETQNLQVP YFVDKNFDKA YRGASLRDLE KTIEKDYIDY IQTSCWKEKQ BACU004121/1-492 SRETQNLQVP YFVDKNFDKA YRGASLRDLE KTIEKDYIDY IQTSCWKEKQ ENSP00000302843/1-358 SRETQNLQVP YFVDKNFDKA YRGASLHDLE KTIEKDYIDY IQTSCWKEKQ ENSBTAP00000002952/1-358 SRETQNLQVP YFVDKNFDKA YRGASLRDLE KTIEKDYIDY IQTSCWKEKQ bmy_07873T0/1-236 SRETQNLQVP YFVDKNFDKA YRGASLRDLE KTIEKDYIDY IQTSCWKEKQ 451 500 ENSTTRP00000003525/1-358 QKSELTNLAG LYRDERLKQK AESLKLENCE KLSKLIGLRR GG BACU004121/1-492 QKSELTNLAG LYRDERLKQK AESLKLENCE KLSKLIGLRR GG ENSP00000302843/1-358 QKSELTNLAG LYRDERLKQK AESLKLENCE KLSKLIGLRR GG ENSBTAP00000002952/1-358 QKSELTNLAG LYRDERLKQK AESLKLENCE KLSKLIGLRR GG bmy_07873T0/1-236 QKSELTNLAG LYRDERLKQK AESLKLENCE KLSKLIGLRR GG