KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:36 2014 Check: 00 .. Name: ENSP00000299481/1-1093 Len: 1117 Check: 6791 Weight: 1.00 Name: bmy_12323T0/1-694 Len: 1117 Check: 8397 Weight: 1.00 Name: BACU004479/1-403 Len: 1117 Check: 3442 Weight: 1.00 Name: ENSBTAP00000002954/1-1095 Len: 1117 Check: 4652 Weight: 1.00 // 1 50 ENSP00000299481/1-1093 MADSSSSSFF PDFGLLLYLE ELNKEELNTF KLFLK-ETME PEHGLTPWNE bmy_12323T0/1-694 -------MFF ---------- ---------- ---------- ---------- BACU004479/1-403 MTDLSSSSFF SDFGLLLYLE ELNKEELNRF KSLLKNETSE PGSCRIPWSE ENSBTAP00000002954/1-1095 MTHLSSSSFF SDFGLLLYLE ELNKEELIRF KSFLKNETLE PRSCRIPWSE 51 100 ENSP00000299481/1-1093 VKKARREDLA NLMKKYYPGE KAWSVSLKIF GKMNLKDLCE RAKEEINWSA bmy_12323T0/1-694 ---------- ---------- ---------- ---------- ---------- BACU004479/1-403 VKTAKREDLA NLMNKCYPGE QAWEVALKIF GKMNLKDLCE RANAEIS--- ENSBTAP00000002954/1-1095 VKKAKRKDLA DLMSKYYPGE QAWEVALSIF GKMNLKDLCQ RAKAEINGTA 101 150 ENSP00000299481/1-1093 QTIGPDDAKA GETQEDQEAV LGDGTEYRNR IKEKFCITWD KKSLAGKPED bmy_12323T0/1-694 ---------- ---------- ---------- ---------- ---------- BACU004479/1-403 ---------- ---------- -CDGAEYRVQ IREKFCIMLD KNHLLGESEN ENSBTAP00000002954/1-1095 QTMRTEDTEA REVQGDQEAV LGDGAEYRIQ IREKFRNMLD KNHLLGKSGD 151 200 ENSP00000299481/1-1093 FHHGIAEKDR KLLEHLFDVD VKTGAQPQIV VLQGAAGVGK TTLVRKAMLD bmy_12323T0/1-694 ---------- ---------- ---------- ---------- ---------- BACU004479/1-403 FCHEIAQEGR ELLERLFDED VRTGSQPQTV LLQGAAGVGK TTLVRIMMLD ENSBTAP00000002954/1-1095 FCHEIAQEGR ELLERLFGEE VGTEEQPQTV VLQGAAGIGK TTLVRMMMLD 201 250 ENSP00000299481/1-1093 WAEGSLYQQR FKYVFYLNGR EINQLKERSF AQLISKDWPS TEGPIEEIMY bmy_12323T0/1-694 ---------- -----YLNAR EINQLRERSF AQMISKDWPS TEGPIERILS BACU004479/1-403 WAQGNPYQQK FTYVFYLSAR EINQLRERSF AQTISKDWPS TEGPIERILS ENSBTAP00000002954/1-1095 WAQGNLYQQK FTYVFYLNAR EINQLRERSF VQLLSKDWPS TEGPIERIMS 251 300 ENSP00000299481/1-1093 QPSSLLFIID SFDELNFAFE EPEFALCEDW TQEHPVSFLM SSLLRKVMLP bmy_12323T0/1-694 QPSSLLFIVD SFDELNFAFE EPECVLCADW TQVHPVSFLM SSLLRK---- BACU004479/1-403 QPSSLLFIID SFDELNFAFE EPECVLCADW TPVHPVSFLM SSLLRKVKLP ENSBTAP00000002954/1-1095 QPSRLLFIID SFDELNFAFE EPEFVLCADW TQVHPVSFLM SSLLRKVMLP 301 350 ENSP00000299481/1-1093 EASLLVTTRL TTSKRLKQLL KNHHYVELLG MSEDAREEYI YQFFEDKRWA bmy_12323T0/1-694 -----VTTKL TACKKLKPLL KSQHSIQLLG RSEDAREAYI YQFFEHERWA BACU004479/1-403 ESSLLVTTKL TAWNQ----- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 ESSLLVTTKL TAWRKLKPLL KNRHSIQLLG MSEDARQEYI YQFFEDQSWA 351 400 ENSP00000299481/1-1093 MKVFSSLKSN EMLFSMCQVP LVCWAACTCL KQQMEKGGDV TLTCQTTTAL bmy_12323T0/1-694 LQVFSSLRNN EMLFSMCKAP VVCWVICSCL EQQMERGGDI TLTCKTTTSL BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 LQVFSCLRNS VMLFNMCKVP AVCWVVCNCL EQQMEKGADI TLTCKTTTSL 401 450 ENSP00000299481/1-1093 FTCYISSLFT PVDGGSPSLP NQAQLRRLCQ VAAKGIWTMT YVFYRENLRR bmy_12323T0/1-694 FTCCISSLLT RVEGSFPSLP SQTQLRSLCC LAAKGARTMT YAFYKENLRR BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 FACCISSLLT QVDRSFPGLP SQTQLRSLCH LAAKGVWTMT YVFYKENLRR 451 500 ENSP00000299481/1-1093 LGLTQSDVSS FMDSNIIQKD AEYENCYVFT HLHVQEFFAA MFYMLKGSWE bmy_12323T0/1-694 HGLAKADVSI FLDMNILQKD KEYENCYVFT HLHIQEFSAA MFYMLQGSWG BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 HGLVKSDVSI FLDTNILQKD TEYENCYVFT HLHIQEFFAA MFYVLEGNWD 501 550 ENSP00000299481/1-1093 AGNPSCQPFE DLKSLLQSTS YKDPHLTQMK CFLFGLLNED RVKQLERTFN bmy_12323T0/1-694 TRDNSFQSFE DLELVLENSS YKDPHLLQMK CFLFGLLKED RVKQLEETFN BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 ARDDSLQSFE NLELVLESSS YKDPHLSQMK CFLFGLLNED RMKQLEETFN 551 600 ENSP00000299481/1-1093 CKMSLKIKSK LLQCMEVLGN SDYSPSQLGF LELFHCLYET QDKAFISQAM bmy_12323T0/1-694 CKMSLEMKWE ILQWMETLGN SEHFPSHLVF LELF--LPPT QDEVFISQAM BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 CTMSLEVKWT ILQWMETLGS SEQLPSHLVF LELFFHLYET QDEVFVSQAM 601 650 ENSP00000299481/1-1093 RCFPKVAINI CEKIHLLVSS FCLKHCRCLR TIRLSVTVVF EKKILKTSLP bmy_12323T0/1-694 RYFQKVVIDI CEEIHLLVSS FCLKHCQCLR TIKLTVIVVF EKKI------ BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 RYFQKVVINI CEEIHLLLSS FCLKHCQCLR TMKLMVTGVF EKKMLNSSFP 651 700 ENSP00000299481/1-1093 TNTWD--GDR ITHCWQDLCS VLHTNEHLRE LDLYHSNLDK SAMNILHHEL bmy_12323T0/1-694 ---------- ---------- ---------- ---------- ---------- BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 PETWQRAGSH IFHWWQDLCS VLHTNKHLRE VILCHSNLDE LAMKIFNLEL 701 750 ENSP00000299481/1-1093 RHPNCKLQKL LLKFITFPDG CQDISTSLIH NKNLMHLDLK GSDIGDNGVK bmy_12323T0/1-694 ---------- ---------- ---------- ---------- ---------- BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 RHPNCKLQKL RLRFTSFPDL CQGISGSLTH NQNLIHLDLK GSDIGDDGVK 751 800 ENSP00000299481/1-1093 SLCEALKHPE CKLQTLRLES CNLTVFCCLN ISNALIRSQS LIFLNLSTNN bmy_12323T0/1-694 ---------- ---------- ---------- -------NKR LTHLCLADNV BACU004479/1-403 ---------- ---------S CDLTTVCCLN ISKALVRSQS LLSLNLSTNN ENSBTAP00000002954/1-1095 SLCEALKHPD CKLQSLSLES CDLTTVCCLN ISKALVRSQS LLSLNLSTNN 801 850 ENSP00000299481/1-1093 LLDDGVQLLC EALRHPKCYL ERLSLESCGL TEAGCEYLSL ALISNKRLTH bmy_12323T0/1-694 LGDSGVKLMS DALKHPQCTL QSLV------ ---------- ---------- BACU004479/1-403 LLDDGVKLLC EALMHPKCNL ERLS------ ---------- ---------- ENSBTAP00000002954/1-1095 LLDDGVKLLC EGLMHPKCNL EKLSLESCGL TVACCEDLSL VLISNKRLTH 851 900 ENSP00000299481/1-1093 LCLADNVLGD GGVKLMSDAL QHAQCTLKSL VLRRCHFTSL SSEYLSTSLL bmy_12323T0/1-694 ---------- ---------- ---------- -LRRCHFTSL SSESLSTSLL BACU004479/1-403 ---------- ---------- ---------- -LRRCHFTSL SSESLSTSLL ENSBTAP00000002954/1-1095 LCLADNMLGD GGVKFMSEAL KHPQCILQSL VLRRCHFTSL SSESLSASLL 901 950 ENSP00000299481/1-1093 HNKSLTHLDL GSNWLQDNGV KLLCDVFRHP SCNLQDLELM GCVLTNACCL bmy_12323T0/1-694 CXKSLTHLDL GSNCLQDDGV KLLCDVFRHP SCDLQDLELM GCVLISACCX BACU004479/1-403 RNKSLTHLDL GSNCLQDDGV KFLCDVFRHP SCNLQDLE-- ---------- ENSBTAP00000002954/1-1095 HNKSLMHLDL GSNCLQDDGV KLLCDAFRHP SCSLQDLELM GCVLTSACCL 951 1000 ENSP00000299481/1-1093 DLASVILNNP NLRSLDLGNN DLQDDGVKIL CDALRYPNCN IQRLGLEYCG bmy_12323T0/1-694 DLASAILNNP NLQSLDLGNN DLQDDGVRIL FEALRHPNCN IQRLGLEHCG BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 DLASAILNNP NLQSLDLGNN DLRDDGVKFL FEALRHPNCN IQRLGLEHCG 1001 1050 ENSP00000299481/1-1093 LTSLCCQDLS SALICNKRLI KMNLTQNTLG YEGIVKLYKV LKSPKCKLQV bmy_12323T0/1-694 LTALCCQDLS STLSSDQKLI KISLTLNNLE CEGIMKLCEV LRSPECKLQV BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 LTSLCCQDLS STLSSNQGLI KISLTLNTLQ CEEIMKL-KV LRSTECKLQV 1051 1100 ENSP00000299481/1-1093 LG-------- ---------- ---LCKEAFD EEAQKLLEAV GVSNPHLIIK bmy_12323T0/1-694 LGFFFPPENN SPEKVKGCGK IERLCKEAFD EEAQKLLEAV GSSNPCLVIK BACU004479/1-403 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002954/1-1095 LG-------- ---------- ---LCKEALD EEAQKLLEAV ASSNLRLAVK 1101 1150 ENSP00000299481/1-1093 PDCNYHNEED VSWWWCF bmy_12323T0/1-694 QDCNDHEKED GSWWQCF BACU004479/1-403 ---------- ------- ENSBTAP00000002954/1-1095 QDCNDHEEED GSWWRCF