KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:36 2014 Check: 00 .. Name: ENSP00000331288/1-379 Len: 621 Check: 6244 Weight: 1.00 Name: ENSBTAP00000002962/1-378 Len: 621 Check: 9586 Weight: 1.00 Name: ENSTTRP00000003527/1-288 Len: 621 Check: 282 Weight: 1.00 Name: bmy_07871T0/1-607 Len: 621 Check: 9220 Weight: 1.00 Name: BACU004123/1-323 Len: 621 Check: 7830 Weight: 1.00 // 1 50 ENSP00000331288/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002962/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003527/1-288 ---------- ---------- ---------- ---------- ---------- bmy_07871T0/1-607 MDETSSLCVR RRGDLSPGNT DDKFQGRHVG AVTRLEMEMK AIPDQHFWGV BACU004123/1-323 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000331288/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002962/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003527/1-288 ---------- ---------- ---------- ---------- ---------- bmy_07871T0/1-607 WREDATTRKL HPERPSLVAG SPCAGPSLPV AFQKQAALWE AEALLTKVLL BACU004123/1-323 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000331288/1-379 ---------- ------MPHS SLHPSIPCPR GHGAQKAALV LLSACLVTLW ENSBTAP00000002962/1-378 ---------- ------MPHS SLHPSIPQPR GLRAQKAALV LLSACLVALW ENSTTRP00000003527/1-288 ---------- ------MPHS SLHPSIPRPR GHRAQKAALV LLGACLVALW bmy_07871T0/1-607 GVDCGEREAL VPKGPQMPHS SLHPSIPRPR GHRAQKAALV LLGTCLAALW BACU004123/1-323 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000331288/1-379 GLGEPPEHTL RYLVLHLASL QLGLLLNGVC SLAEELRHIH SRYRGSYWRT ENSBTAP00000002962/1-378 GLGEPPDYTL KWLVLHLASQ QMGLLIKGIC SLAEELCHVH SRYHGSYWRA ENSTTRP00000003527/1-288 GLGELPDYTL QWLVLYLASQ QMGLLIKGVC NLVEELSHVH SRYQGSYWKA bmy_07871T0/1-607 GLGELPDYTL QWLVLHLASQ QMGLLIKGVC SLAEELCHVH SRYQGSYWKA BACU004123/1-323 ---------- ---------- -MGLLIKGVC SLAEELCHVH SRYQGNYWKA 201 250 ENSP00000331288/1-379 VRACLGCPLR RGALLLLSIY FYYSLPNAVG PPFTWMLALL GLSQALNILL ENSBTAP00000002962/1-378 VRACLCSSMR CGALLLLSCY FYCSLPNMAD LPFTWMLALL GLSQALNILL ENSTTRP00000003527/1-288 VRACLGCPMR RGALLLLSCY FYFSLPNVAG LPFTCMLALL GLSQALNILL bmy_07871T0/1-607 VRACLGCPVR RGALLLLSCY FSCSLPNVAG LPFTWMLALL GLSQALNILL BACU004123/1-323 VRACLGCPMR RGALLLLSCY FYRSLPNVAG LPFTWMLALL GLSQALNILL 251 300 ENSP00000331288/1-379 GL-------- ---------- ---------- ---------- ---------- ENSBTAP00000002962/1-378 GL-------- ---------- ---------- ---------- ---------- ENSTTRP00000003527/1-288 GL-------- ---------- ---------- ---------- ---------- bmy_07871T0/1-607 GLQVRHKERW RVCSRGGVAN VTCSELSTGS GTSLEAGPWM EPIMVWVEQW BACU004123/1-323 GL-------- ---------- ---------- ---------- ---------- 301 350 ENSP00000331288/1-379 ---------- ---------- ---------- ----KGLAPA EISAVCEKGN ENSBTAP00000002962/1-378 ---------- ---------- ---------- ----QGLAPA EVSAICEKRN ENSTTRP00000003527/1-288 ---------- ---------- ---------- ----QGLAQA EISAICEKRN bmy_07871T0/1-607 QRTEPNGSRL GNLGGRRRAL VVLHGGPTAP PCYPQGLAPA EVSAICEKRN BACU004123/1-323 ---------- ---------- ---------- ----QGLTPA EVSAICEKRN 351 400 ENSP00000331288/1-379 FNVAHGLAWS YYIGYLRLIL ---------- ---------- ---------- ENSBTAP00000002962/1-378 FNVAHGLAWS YYIGYLRLIL ---------- ---------- ---------- ENSTTRP00000003527/1-288 FNVAHGLAWS YYIGYLRLIL ---------- ---------- ---------- bmy_07871T0/1-607 FNVAHGLAWS YYIGYLRLIL PGNVSGLAPQ FSCTHTLRGT MMWVSVLSWV BACU004123/1-323 FNVAHGLAWS YYIGYLRLIL ---------- ---------- ---------- 401 450 ENSP00000331288/1-379 ---------- ----PELQAR IRTYNQHYNN LLRGAVSQRL YILLPLDCGV ENSBTAP00000002962/1-378 ---------- ----PGLPAR IQIYNQFHNN TLQGAGSHRL HILFPLDCGV ENSTTRP00000003527/1-288 ---------- ----PGLQAR IQIYNQFHNN VLRGAGSQRL HILFPLDCGV bmy_07871T0/1-607 GDTVGGNDFL GLSTPGLQAR IQIYNQFHNN VLRGAGSHRL HILFPLDCGV BACU004123/1-323 ---------- ----PGLQAR IQIYNQFHNN VLRGAGSHRL HILFPLDCGV 451 500 ENSP00000331288/1-379 PDNLSMADPN IRFLDKLPQQ TGDHAGIKDR VYSNSIYELL ENGQRAGTCV ENSBTAP00000002962/1-378 PDDLNVADPN IRFLHELPQQ SADRAGIKGR VYTNSIYELL ENGQRAGVCV ENSTTRP00000003527/1-288 PDDLSMADPN IRFLHKLPQQ SADRAGIKGR VYTNSIYEIL ENGQPAGICI bmy_07871T0/1-607 PDDLSVADPN IRFLHKLPEQ SADRAGIKGR VYTNSIYELL ENGQ------ BACU004123/1-323 PDDLSMADPN IRFLHKLPEQ SADRAGIKGR VYTNSIYELL ENGQPAGICI 501 550 ENSP00000331288/1-379 LEYATPLQTL FAMSQYSQAG FSREDRLEQA KLFCRTLEDI LADAPESQNN ENSBTAP00000002962/1-378 LEYATPLQTL FAMSQDGRAG FSREDRLEQA KLFCRTLEDI LANAPESQNN ENSTTRP00000003527/1-288 -EYATPLQTL FAMSQDDRAG FSREDRLEQA K--------- ---------- bmy_07871T0/1-607 -------LTL FAMSQDGRAG FSREDRLEQA KLFCRTLEDI LAAAPESQNN BACU004123/1-323 LEYATPLQTL FAMSQDGRAG FSREDRLEQA KLFCRTLEDI LAAAPESQNN 551 600 ENSP00000331288/1-379 CRLIAYQEPA DDSSFSLSQE VLRHLRQEEK EEVTVGSLKT SAVPSTSTMS ENSBTAP00000002962/1-378 CRLIVYQEPA EGSSFSLSQE ILQHLRQEER E-VTMGSTET SVMPGSSVLS ENSTTRP00000003527/1-288 ---------- ---------- ---------- ---------- ---------- bmy_07871T0/1-607 CHLIVYQEPA EGSSFSLSQE ILQHLRQEER E-VTMGTVGT SVMPVSSTLS BACU004123/1-323 CHLIVYQEPA EGSSFSLSQE ILQHLRQEER E-VTMGTVGT SVMPVSSTLS 601 650 ENSP00000331288/1-379 QEPELLISGM EKPLPLRTDF S ENSBTAP00000002962/1-378 QEPELLISGL EKPLPLRSDV F ENSTTRP00000003527/1-288 ---------- ---------- - bmy_07871T0/1-607 QEPELLISGM EQPLPLRSDV F BACU004123/1-323 QEPELLISGM EQPLPLRSDV F