KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:38 2014 Check: 00 .. Name: ENSP00000205061/1-1203 Len: 1210 Check: 240 Weight: 1.00 Name: ENSBTAP00000002972/1-1184 Len: 1210 Check: 6211 Weight: 1.00 Name: bmy_14551T0/1-999 Len: 1210 Check: 7665 Weight: 1.00 Name: ENSTTRP00000000319/1-1196 Len: 1210 Check: 1918 Weight: 1.00 // 1 50 ENSP00000205061/1-1203 MAACGRVRRM FRLSAALHLL LLFAAGAEKL PGQGVHSQGQ GPGANFVSFV ENSBTAP00000002972/1-1184 MAACGRVLRM FRLAAALPLL LLAADGAQKI QGPGGHGQGP GPGSNLLPLG bmy_14551T0/1-999 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000319/1-1196 MAACGRVRRM FRLSAALQLL LLAAAGADKL QGQGGHSPGQ GPGANLLPLG 51 100 ENSP00000205061/1-1203 GQAGGGGPAG QQLPQLPQSS QLQQQQQQQQ QQQQPQPP-- --QPPFPAGG ENSBTAP00000002972/1-1184 AQPGGGVLPG QLL--LPQSS QLQQQQQQQQ QPPQQQQPQQ QQQPPFPAGG bmy_14551T0/1-999 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000319/1-1196 GQPGGGALGG QLQ--LPQSS QLQQQQQQQQ QPPQQ--P-- --QPPFPAGG 101 150 ENSP00000205061/1-1203 PPARRGGA-- -GAGGGWKLA EEESCREDVT RVCPKHTWSN NLAVLECLQD ENSBTAP00000002972/1-1184 SPVRRGGAGP GGAGGGWKLA EEESCREDVS RVCPKHTWSN NLAVLECLQD bmy_14551T0/1-999 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000319/1-1196 SPARRGGSGP GGAGGGWKLA EEESCREDVT RVCPKHTWSN NLAVLECLQD 151 200 ENSP00000205061/1-1203 VREPENEISS DCNHLLWNYK LNLTTDPKFE SVAREVCKST ITEIKECADE ENSBTAP00000002972/1-1184 VREPENEISS DCNHLLWNYK LNLTTDPKFE SVAREVCKST ISEIKECADE bmy_14551T0/1-999 ---PENEISS DCNHLLWNYK LNLTTDPKFE SVAREVCKST ISEIKECADE ENSTTRP00000000319/1-1196 VREPENEISS DCNHLLWNYK LNLTTDPKFE SVAREVCKST ISEIKECADE 201 250 ENSP00000205061/1-1203 PVGKGYMVSC LVDHRGNITE YQCHQYITKM TAIIFSDYRL ICGFMDDCKN ENSBTAP00000002972/1-1184 PFGKGYLVSC LVDHRGNITE YQCHQYITKM TAIIFSDYRL ICGFMDDCKN bmy_14551T0/1-999 PVGKGYLVSC LVDHRGNITE YQCHQYITKM TAIIFSDYRL ICGFMDDCKN ENSTTRP00000000319/1-1196 PVGKGYLVSC LVDHRGNITE YQCHQYITKM TAIIFSDYRL ICGFMDDCKN 251 300 ENSP00000205061/1-1203 DINILKCGSI RLGEKDAHSQ GEVVSCLEKG LVKEAEEREP KIQVSELCKK ENSBTAP00000002972/1-1184 DINILKCGSI RLGEKDAHSQ GEVVSCLEKG LVKEAEERDP KIQVSELCKK bmy_14551T0/1-999 DINILKCGSI RLGEKDAHSQ GEVVSCLEKG LVKEAEERDP KIQVSELCKK ENSTTRP00000000319/1-1196 DINILKCGSI RLGEKDAHSQ GEVVSCLEKG LVKEAEERDP KIQVSELCKK 301 350 ENSP00000205061/1-1203 AILRVAELSS DDFHLDRHLY FACRDDRERF CENTQAGEGR VYKCLFNHKF ENSBTAP00000002972/1-1184 AILRVAELSS DDFHLDRHLY FACRDDRERF CENTQAGEGR VYKCLFNHKF bmy_14551T0/1-999 AILRVAELSS DDFHLDRHLY FACRDDRERF CENTQAGEGR VYKCLFNHKF ENSTTRP00000000319/1-1196 AILRVAELSS DDFHLDRHLY FACRDDRERF CENTQAGEGR VYKCLFNHKF 351 400 ENSP00000205061/1-1203 EESMSEKCRE ALTTRQKLIA QDYKVSYSLA KSCKSDLKKY RCNVENLPRS ENSBTAP00000002972/1-1184 EESMSEKCRE ALTTRQKLIA QDYKVSYSLA KSCKSDLKKY RCNVENLPRS bmy_14551T0/1-999 EESMSEKCRE ALTTRQKLIA QDYKVSYSLA KSCKSDLKKY RCNVENLPRS ENSTTRP00000000319/1-1196 EESMSEKCRE ALTTRQKLIA QDYKVSYSLA KSCKSDLKKY RCNVENLPRS 401 450 ENSP00000205061/1-1203 REARLSYLLM CLESAVHRGR QVSSECQGEM LDYRRMLMED FSLSPEIILS ENSBTAP00000002972/1-1184 REARLSYLLM CLESAVHRGR QVSSECQGEM LDYRRMLMED FSLSPEIILS bmy_14551T0/1-999 REARLSYLLM CLESAVHRGR QVSSECQGEM LDYRRMLMED FSLSPEIILS ENSTTRP00000000319/1-1196 REARLSYLLM CLESAVHRGR QVSSECQGEM LDYRRMLMED FSLSPEIILS 451 500 ENSP00000205061/1-1203 CRGEIEHHCS GLHRKGRTLH CLMKVVRGEK GNLGMNCQQA LQTLIQETDP ENSBTAP00000002972/1-1184 CRGEIEHHCS GLHRKGRTLH CLMKVVRGEK GNLGMNCQQA LQTLIQETDP bmy_14551T0/1-999 CRGEIEHHCS GLHRKGRTLH CLMKVVRGEK GNLGMNCQQA LQTLIQETDP ENSTTRP00000000319/1-1196 CRGEIEHHCS GLHRKGRTLH CLMKVVRGEK GNLGMNCQQA LQTLIQETDP 501 550 ENSP00000205061/1-1203 GADYRIDRAL NEACESVIQT ACKHIRSGDP MILSCLMEHL YTEKMVEDCE ENSBTAP00000002972/1-1184 GADYRIDRAL NEACESVIQT ACKHIRSGDP MILSCLMEHL YTEKMVEDCE bmy_14551T0/1-999 GADYRIDRAL NEACESVIQT ACKHIRSGDP M--------- ---------- ENSTTRP00000000319/1-1196 GADYRIDRAL NEACESVIQT ACKHIRSGDP MILSCLMEHL YTEKMVEDCE 551 600 ENSP00000205061/1-1203 HRLLELQYFI SRDWKLDPVL YRKCQGDASR LCHTHGWNET SEFMPQGAVF ENSBTAP00000002972/1-1184 HRLLELQYFI SRDWKLDPVL YRKCQGDASR LCHTHGWNET SELMPPGAVF bmy_14551T0/1-999 ---------- -----LDPVL YRKCQGDASR LCHTHGWNET SELMPPGAVF ENSTTRP00000000319/1-1196 HRLLELQYFI SRDWKLDPVL YRKCQGDASR LCHTHGWNET SELMPPGAVF 601 650 ENSP00000205061/1-1203 SCLYRHAYRT EEQGRRLSRE CRAEVQRILH QRAMDVKLDP ALQDKCLIDL ENSBTAP00000002972/1-1184 SCLYRHAYRT EEQGRRLSRE CRAEVQRILH QRAMDVKLDP ALQDKCLIDL bmy_14551T0/1-999 SCLYRHAYRT EEQGRRLSRE CRAEVQRILH QRAMDVKLDP ALQDKCLIDL ENSTTRP00000000319/1-1196 SCLYRHAYRT EEQGRRLSRE CRAEVQRILH QRAMDVKLDP ALQDKCLIDL 651 700 ENSP00000205061/1-1203 GKWCSEKTET GQELECLQDH LDDLVVECRD IVGNLTELES EDIQIEALLM ENSBTAP00000002972/1-1184 GKWCSEKTET GQELECLQDH LDDLAVECRD IVGNLTELES EDIQIEALLM bmy_14551T0/1-999 GKWCSEKTET GQELECLQDH LDDLAVECRD IVGNLTELES EDIQIEALLM ENSTTRP00000000319/1-1196 GKWCSEKTET GQELECLQDH LDDLAVECRD IVGNLTELES EDIQIEALLM 701 750 ENSP00000205061/1-1203 RACEPIIQNF CHDVADNQID SGDLMECLIQ NKHQKDMNEK CAIGVTHFQL ENSBTAP00000002972/1-1184 RACEPIIQNF CHDVADNQID SGDLMECLIQ NKHQKDMNEK CAVGVTHFQL bmy_14551T0/1-999 RACEPIIQNF CHDVADNQID SGDLMECLIQ NKHQKDMNEK CAIGVTHFQL ENSTTRP00000000319/1-1196 RACEPIIQNF CHDVADNQID SGDLMECLIQ NKHQKDMNEK CAIGVTHFQL 751 800 ENSP00000205061/1-1203 VQMKDFRFSY KFKMACKEDV LKLCPNIKKK VDVVICLSTT VRNDTLQEAK ENSBTAP00000002972/1-1184 VQMKDFRFSY KFKMACKEDV LKLCPNIKKK VDVVICLSTT VRNDTLQEVK bmy_14551T0/1-999 VQMKDFRFSY KFKMACKEDV LKLCPNIKKK VDVVICLSTT VRNDTLQEAK ENSTTRP00000000319/1-1196 VQMKDFRFSY KFKMACKEDV LKLCPNIKKK VDVVICLSTT VRNDTLQEAK 801 850 ENSP00000205061/1-1203 EHRVSLKCRR QLRVEELEMT EDIRLEPDLY EACKSDIKNF CSAVQYGNAQ ENSBTAP00000002972/1-1184 EHRVSLKCRK QLRVEELEMT EDIRLEPDLY EACKGDIKNH CSTVQYGNAQ bmy_14551T0/1-999 EHRVSLKCRK QLRVEELEMT EDIRLEPDLY EACKSDIKNH CSTVQYGNAQ ENSTTRP00000000319/1-1196 EHRVSLKCRK QLRVEELEMT EDIRLEPDLY E-CKSDIKNH CSTVQYGNAQ 851 900 ENSP00000205061/1-1203 IIECLKENKK QLSTRCHQKV FKLQETEMMD PELDYTLMRV CKQMIKRFCP ENSBTAP00000002972/1-1184 IIECLKENKK QLSPRCHQKV FKLQETEMMD PELDYTLMRV CKQMIKRFCP bmy_14551T0/1-999 IIECLKENKK QLSTRCHQKV FKLQETEMMD PELDYTLMRV CKQMIKRFCP ENSTTRP00000000319/1-1196 IIECLKENKK QLSTRCHQKV FKLQETEMMD PELDYTLMRV CKQMIKRFCP 901 950 ENSP00000205061/1-1203 EADSKTMLQC LKQNKNSELM DPKCKQMITK RQITQNTDYR LNPMLRKACK ENSBTAP00000002972/1-1184 EADSKTMLQC LKQNKNSELM DPKCKQMITK RQITQNTDYR LNPVLRKACK bmy_14551T0/1-999 EADSKTMLQC LKQNKNSELM DPKCKQMITK RQITQNTDYR LNPVLRKACK ENSTTRP00000000319/1-1196 EADSKTMLQC LKQNKNSELM DPKCKQMITK RQITQNTDYR LNPVLRKACK 951 1000 ENSP00000205061/1-1203 ADIPKFCHGI LTKAKDDSEL EGQVISCLKL RYADQRLSSD CEDQIRIIIQ ENSBTAP00000002972/1-1184 ADIPKFCHGI LTKAKDDSEL EGQVISCLKL RYADQRLSSD CEDQIRIIIQ bmy_14551T0/1-999 ADIPKFCHGI LTKAKDDSEL EGQVISCLKL RYADQRLSSD CEDQIRIIIQ ENSTTRP00000000319/1-1196 ADIPKFCHGI LTKAKDDAEL EGQVISCLKL RYADQRLSSD CEDQIRIIIQ 1001 1050 ENSP00000205061/1-1203 ESALDYRLDP QLQLHCSDEI SSLCAEEAAA QEQTGQVEEC LKVNLLKIKT ENSBTAP00000002972/1-1184 ESALDYRLDP QLQLHCSDEI ASLCAEEAAA QEQTGQVEEC LKVNLLKIKT bmy_14551T0/1-999 ESALDYRLDP QLQLHCSDEI ASLCAEEAAA QEQTGQVEEC LKVNLLKIKT ENSTTRP00000000319/1-1196 ESALDYRLDP QLQLHCSDEI ASLCAEEAAA QEQTGQVEEC LKVNLLKIKT 1051 1100 ENSP00000205061/1-1203 ELCKKEVLNM LKESKADIFV DPVLHTACAL DIKHHCAAIT PGRGRQMSCL ENSBTAP00000002972/1-1184 EGCKKEVLNM LKESKADIFV DPVLHTACAL DIKHHCAAIT PGRGRQMSCL bmy_14551T0/1-999 EMCKKEVLNM LKESKADIFV DPVLHTACAL DIKHHCAAIT PGRGRQMSCL ENSTTRP00000000319/1-1196 EMCKKEVLNM LKESKADIFV DPVLHTACAL DIKHHCAAIT PGRGRQMSCL 1101 1150 ENSP00000205061/1-1203 MEALEDKRVR LQPECKKRLN DRIEMWSYAA KVAPADGFSD LAMQVMTSPS ENSBTAP00000002972/1-1184 MEALEDKRVR LQPECKKRLN DRIEMWSYAA KVAPADGFSD LAMQVMTSPS bmy_14551T0/1-999 MEALEDKRVR LQPECKKRLN DRIEMWSYAA KVAPADGFSD LAMQVMTSPS ENSTTRP00000000319/1-1196 MEALEDKRVR LQPECKKRLN DRIEMWSYAA KVAPADGFSD LAMQVMTSPS 1151 1200 ENSP00000205061/1-1203 KNYILSVISG SICILFLIGL MCGRITKRVT RELKDRLQYR SETMAYKGLV ENSBTAP00000002972/1-1184 KNYILSVISG SICILFLIGL MCGRITKRVT RELKDR---- ---------- bmy_14551T0/1-999 KNYILSVISG SICILFLIGL MCGRITKRVT RELKDR---- ---------- ENSTTRP00000000319/1-1196 KNYILSVISG SICILFLIGL MCGRITKRVT RELKDR---- -ETMAYKDLA 1201 1250 ENSP00000205061/1-1203 WSQDVTGSPA ENSBTAP00000002972/1-1184 ---------- bmy_14551T0/1-999 ---------- ENSTTRP00000000319/1-1196 WSQGVTGSPT