KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:41 2014 Check: 00 .. Name: ENSP00000362105/1-253 Len: 288 Check: 9247 Weight: 1.00 Name: ENSBTAP00000002976/1-253 Len: 288 Check: 8677 Weight: 1.00 Name: ENSTTRP00000012810/1-253 Len: 288 Check: 634 Weight: 1.00 Name: bmy_02110T0/1-233 Len: 288 Check: 8553 Weight: 1.00 Name: BACU009695/1-253 Len: 288 Check: 9896 Weight: 1.00 // 1 50 ENSP00000362105/1-253 MAAAFRKAAK SRQREHRERS QPGFRKHLGL LEKKKDYKLR ADDYRKKQEY ENSBTAP00000002976/1-253 MAAAFRKAAK SRQREHRERS QPGFRKHLGL LEKKKDYKLR ADDYRKKQEY ENSTTRP00000012810/1-253 MAAAFRKAAK SRQREHRERS QPSFRKHLGL LEKKKDYKLR ADDYQKKQKY bmy_02110T0/1-233 MAAAFRKAAK SRQREHRERS ---------- ---------- ---------- BACU009695/1-253 MAAAFRKAAK SRQREHRERS QPSFRKHLGL LEKKKDYKLR ADDYRKKQKY 51 100 ENSP00000362105/1-253 LKALRKKALE KNPDEFYYKM TRVKLQDGVH IIKETKEEVT PEQLKLMRTQ ENSBTAP00000002976/1-253 LRALRKKALE KNPDEFYYKM TRVKLQDGVH VIKETKEEVT PEQLKLMRTQ ENSTTRP00000012810/1-253 LRDLRKKALE KNPDEFYYKM TRVKLQDGVH VIKETKEEVT PEQLKLMRTQ bmy_02110T0/1-233 ---------- ---------- -----QDGVH VIKETKEEVT PEQLKLMRTQ BACU009695/1-253 LRALRKKALE KNPDEFYYKM TRVKLQDGVH VIKETKEEVT PEQLKLMRTQ 101 150 ENSP00000362105/1-253 DVKYIEMKRV AEAKKIERLK SELHLLDFQG KQQNKHVFFF DTKKEVEQFD ENSBTAP00000002976/1-253 DIKYIEMKRV AEAKKIERLK AELHLLDFQG KQQNKHVFFF DTKKEVEQFD ENSTTRP00000012810/1-253 DVKYVEMKRV AEAKKIERLK SELHLLDFQG KQQKKHVFFF DTKKEVEQFD bmy_02110T0/1-233 DVKYIEMKRV AEAKKIERLK SELHLLDFQG KQQKKHVFFF DTKKEVEQFD BACU009695/1-253 DVKYIEMKRV AEAKKIERLK SELHLLDFQG KQQKKHVFFF DTKKEVEQFD 151 200 ENSP00000362105/1-253 VATHLQTAPE LVDRVFNRPR IETLQKEKVK GVTNQTGLK- ---------- ENSBTAP00000002976/1-253 IATHLRTAPE LVDRVFNRPT IETLQKEKVK GVNNQTRLK- ---------- ENSTTRP00000012810/1-253 IATHLRTAPE LVDRVFNRPT IETLQKEKVK GVNNQTRLK- ---------- bmy_02110T0/1-233 IATHLRTTPE LVDRVFNRPT IETLQKEKVK GVNNQTQLKV NLVSVGKSPR BACU009695/1-253 IATHLRTAPE LVDRVFNRPT IETLQKEKVK GVNNQTRLK- ---------- 201 250 ENSP00000362105/1-253 ---------- ---------- ----RIAKER QKQYNCLTQR IEREKKLFVI ENSBTAP00000002976/1-253 ---------- ---------- ----RIAKER QKQYDCLTQR IERERKLFVI ENSTTRP00000012810/1-253 ---------- ---------- ----QIAKER QKQYNCLTQR IEREKKLFVI bmy_02110T0/1-233 FHGAPECGGR KMANLRVSCY VDSGQIAKER QKQYNCLTQR IEREKKLFVI BACU009695/1-253 ---------- ---------- ----QIAKER QKQYNCLTQR IEREKKLFVI 251 300 ENSP00000362105/1-253 AQKIQTRKDL MDKTQKVKVK KETVNSPAIY KFQSRRKR ENSBTAP00000002976/1-253 AQKIQTRKDL LDKTQKVKVK KETVNSPAIY KFESRRKR ENSTTRP00000012810/1-253 AQKIQTRKDL LDKTQKVKVK KETVNSPAIY KFESRRKR bmy_02110T0/1-233 AQKIQTRKDL LDKTQKVKVK KETVNSPAIY KFESRRKR BACU009695/1-253 AQKIQTRKDL LDKTQKVKVK KETVNSPAIY KFESRRKR