KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:41 2014 Check: 00 .. Name: ENSTTRP00000002156/1-568 Len: 639 Check: 6061 Weight: 1.00 Name: ENSP00000373244/1-566 Len: 639 Check: 9819 Weight: 1.00 Name: bmy_05610T0/1-635 Len: 639 Check: 8275 Weight: 1.00 Name: ENSBTAP00000002979/1-544 Len: 639 Check: 828 Weight: 1.00 // 1 50 ENSTTRP00000002156/1-568 MGRAEGGVPG RGPPPLLLLL GATLVLATGA APVREAGRAV EADRQVKRVL ENSP00000373244/1-566 MGRAGGGGPG RGPPPLLLFL GAALVLASGA VPAREAGSAV EAEELVKGSP bmy_05610T0/1-635 --RAEGGGPG RGPPPLLLLL GATLVLATGA APVREAGRAV EADRQVKRVL ENSBTAP00000002979/1-544 RAKCGGGGSG RGKEPELRAA RVRARVMSGA GPLPEAGSAV EADTPVKSVP 51 100 ENSTTRP00000002156/1-568 AWEPRANDTR EKAGPPAAGE DETSRTAPGG ER------VG PEEALEASAA ENSP00000373244/1-566 AWEPPANDTR EEAGPPAAGE DEASWTAPGG EL------AG PEEVLQESAA bmy_05610T0/1-635 AWEPRANDTR EKAGPPAAGE DETSRTAPGG EHAVVGPGVG PEEALEASAA ENSBTAP00000002979/1-544 AWEPRANDTR EKAGPPAAGK DETSRIAPGG EQALVGPGVG AEEALEASAA 101 150 ENSTTRP00000002156/1-568 VTDTTWLEAD NPGLGGVTAE AGSGDTQALP ATLPAPDEAL GQSSTPPATP ENSP00000373244/1-566 VTGTAWLEAD SPGLGGVTAE AGSGDAQALP ATLQAPHEVL GQSIMPPAIP bmy_05610T0/1-635 VTDTAWLEAD SPGLGGVTAE AGSGDTQALP ATLPAPDEAL GQSSTAPATX ENSBTAP00000002979/1-544 VTSTAWLEAE SPGLGGVTAE AGSGDTQALP ATLPTPDEAL GTSSTSAATF 151 200 ENSTTRP00000002156/1-568 EATEANGPLS PTPGDKLSPD PELPKESPLE VWLNLGGSTP DPHGPEPTYP ENSP00000373244/1-566 EATEASGPPS PTPGDKLSPA SELPKESPLE VWLNLGGSTP DPQGPELTYP bmy_05610T0/1-635 EATEASGPPS PTPGDKLSPD PELPKESPLE VWLNLGGSTP DPHGPEPTYP ENSBTAP00000002979/1-544 EATEASEPPS PAPGDKPSPG PELPKESPME VWLNLGGSTP DPHGPEPTYP 201 250 ENSTTRP00000002156/1-568 FQGTLEPHTA SDIIDIDYFE GLDGEGRGAD LGSFPGSPGT SEHHPDPGEE ENSP00000373244/1-566 FQGTLEPQPA SDIIDIDYFE GLDGEGRGAD LGSFPGSPGT SENHPDTEGE bmy_05610T0/1-635 FQGTLEPHTA SDIIDIDYFE GLDGEGRGAD LGSFPGSPGT SEHHPDPGGE ENSBTAP00000002979/1-544 FQGTLEPHPA SDIIDIDYFE GLDGEGRGAD LGSFPGSPGT SEHHPDPGGE 251 300 ENSTTRP00000002156/1-568 TPSWSLLDLY DDFTPFDESD FYPTTSFYDD LDEEEEEEED DKDAAGGRDL ENSP00000373244/1-566 TPSWSLLDLY DDFTPFDESD FYPTTSFYDD LDEEEEEEED DKDAVGGGDL bmy_05610T0/1-635 TPSWSLLDLY DDFTPFDESD FYPTTSFYDD LDEEEEEEED DKDAGGGRDL ENSBTAP00000002979/1-544 TPSWSLLDLY DDFTPFDESD FYPTTSFYDD LDEEEEEEE- DKDAVGGGDL 301 350 ENSTTRP00000002156/1-568 EDENENDLLV PTEKPGLGPG TGQPTGRWHA VPPQHTLGMV PGSSIALRPR ENSP00000373244/1-566 ED--ENELLV PTGKPGLGPG TGQPTSRWHA VPPQHTLGSV PGSSIALRPR bmy_05610T0/1-635 ED--ENDLLM PTEKPGLGPG TGQPTGRWHA VPPQHTLGMV PGSSIALRPR ENSBTAP00000002979/1-544 ED--ENDLLV PTEKPGLGPG TGQPTSRWHA VPPQHTLGMI PGSSIALRPR 351 400 ENSTTRP00000002156/1-568 PREPGRDLAP SENVTECRSG FVQHNGSCRS VCDLFPSYCH NGGQCYLVEN ENSP00000373244/1-566 PGEPGRDLAS SENGTECRSG FVRHNGSCRS VCDLFPSYCH NGGQCYLVEN bmy_05610T0/1-635 PGEPGRDLAP SENGTECRSG FVRHNGSCRS VCDLFPSYCH NGGQCYLVEN ENSBTAP00000002979/1-544 PGEPGRDLAP SENGTVCRSG FVRHNGSCRS VCDLFPSYCH NGGQCYLVEN 401 450 ENSTTRP00000002156/1-568 IGAFCXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373244/1-566 IGAFCRCNTQ DYIWHKGMRC ESIITDFQVM CVAVGSAALV LLLLFMMTVF bmy_05610T0/1-635 IGAFCRCNTQ DYIWHKGMRC ESIITDFQVM CVAVGSAALV LLLLFMMTVF ENSBTAP00000002979/1-544 IGAFCRCNTQ DYIWHKGMRC ESIITDFQVM CVAVGSAALV LLLLFMMTVF 451 500 ENSTTRP00000002156/1-568 XXXXXXXXXX XXTKLRRTNK FRTPSELHND NFSLSTIAEG SHPNV----- ENSP00000373244/1-566 FAKKLYLLKT ENTKLRRTNK FRTPSELHND NFSLSTIAEG SHPNV----- bmy_05610T0/1-635 FAKKLYLLKT ENTKLRRTSK FRTPSELHND NFSLSTIAEG SHPNAPAPGH ENSBTAP00000002979/1-544 FAKKLYLLKT ENTKLRRTNK FRTPSELHND NFSLSTIAEG SHPN------ 501 550 ENSTTRP00000002156/1-568 ---------- ---------- ---------- ---------- ---------- ENSP00000373244/1-566 ---------- ---------- ---------- ---------- ---------- bmy_05610T0/1-635 ISGPLQSVEP LFRALRIRIG QAVGAVKVPT DHFLKTLAQC VIWTRLTSQI ENSBTAP00000002979/1-544 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000002156/1-568 ---------- RKLCNAPHTC SPHACALALY DNVICQDDSS APHKIQEALK ENSP00000373244/1-566 ---------- RKLCNTPRTS SPHARALAHY DNVICQDDPS APHKIQEVLK bmy_05610T0/1-635 LGTVRISEIK QKPSKPQIIS DPNARILHMT QAPYLQDDSS APHKIQEALK ENSBTAP00000002979/1-544 ---------- ---------- ---------- ------DDSS APHKIQEALK 601 650 ENSTTRP00000002156/1-568 SCLKEEEPFN IQNSMSPKLE GGKGDQADLE VNCLQNNLT ENSP00000373244/1-566 SCLKEEESFN IQNSMSPKLE GGKGDQADLD VNCLQNNLT bmy_05610T0/1-635 SCLKEEEPFN IQNSMSPKLE GGKGDQADLE VNCLQNNLT ENSBTAP00000002979/1-544 SCLKEEEPFN IQNSMSPKLE GGKGDQADLE VNCLQNNLT