KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:42 2014 Check: 00 .. Name: bmy_02514T0/1-268 Len: 394 Check: 1567 Weight: 1.00 Name: ENSP00000380958/1-197 Len: 394 Check: 1813 Weight: 1.00 Name: ENSBTAP00000002984/1-170 Len: 394 Check: 8474 Weight: 1.00 Name: ENSTTRP00000003083/1-281 Len: 394 Check: 4539 Weight: 1.00 Name: BACU004422/1-300 Len: 394 Check: 6062 Weight: 1.00 // 1 50 bmy_02514T0/1-268 ---------- ---------- ---------- ---------- ---------- ENSP00000380958/1-197 MGNHAGKREL NAEKASTNSE TNRGESEKKR NLGELSRTTS EDNEVFGEAD ENSBTAP00000002984/1-170 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003083/1-281 ---------- -------DGE TNGGESEKKR NLRNLSRETS EDSDVF---D BACU004422/1-300 MGNHAGKRDL GAEKGNKDGE TNRGESEKKR NLRDLSRETS EDNDVF---D 51 100 bmy_02514T0/1-268 ---------- ---------- ---------- --------MA LSRLWSR--- ENSP00000380958/1-197 ANQNNGTSSQ DTAVTDSKRT ADPKNAWQDA HPADPGSRPH LIRLFSRDAP ENSBTAP00000002984/1-170 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003083/1-281 VDQNNGTPLR DTAVTDSKRT AGPKNAWPDA NPADPGGRPH LIRLFSRDAP BACU004422/1-300 VDQNNGTPLQ DTAVTDSKRT AGPKNAWPDA SPADPGGRPH LIRLFSRDAP 101 150 bmy_02514T0/1-268 ------LLGR P--------- ------APKG HGALAEYEQP LPS--IRSPK ENSP00000380958/1-197 GREDNTFKDR PSESDELQTI QEDSAATSES LDVMASQKRP SQRHGSKYLA ENSBTAP00000002984/1-170 ---------- ---------- ---------- ---MAAQKRP SQR--SKYLA ENSTTRP00000003083/1-281 GREDNTFKDR PSESDELQTI QEDSAAAPEG LDVMAAQKRP SQR--SKYLA BACU004422/1-300 GREDNTFKDR PSESDELQTI QEDSAAAPEG LDVMAAQKRP SQR--SKYLA 151 200 bmy_02514T0/1-268 ASGSTDEQRK AASQTAEGPA CPETTRPVFQ ---------- --DGHHAARA ENSP00000380958/1-197 TASTMDHARH GFLPRHRDTG ILDSIGRFFG GDRGAPKRGS ---------- ENSBTAP00000002984/1-170 SASTMDHARH GFLPRHRDTG ILDSLGRFFG SDRGAPKRGS GKDGHHAART ENSTTRP00000003083/1-281 SASTMDHARH GFLPRHRDTG ILNSLGRFFG ADRGAPKRGS --DGHHAARA BACU004422/1-300 SASTMDHARH GFLPRHRDTG ILDSLGRFFG ADRGAPKRGS GKDGHHAARA 201 250 bmy_02514T0/1-268 THYGSLPPKA QHGRPQDENP VVHFFKNIVT PRTPPPSQGK GRGLSLSRFS ENSP00000380958/1-197 ---------- --GKVSSEE- ---------- ---------- ---------- ENSBTAP00000002984/1-170 THYGSLPQKA QHGRPQDENP VVHFFKNIVT PRTPPPSQGK GRGLSLSRFS ENSTTRP00000003083/1-281 THYGSLPQKA QHGRPQDENP VVHFFKNIVT PRTPPPSQGK GRGLSLSRFS BACU004422/1-300 THYGSLPPKA QHGRPQDENP VVHYFKNIVT PRTPPPSQGK GRGLSLSRFS 251 300 bmy_02514T0/1-268 WGAEGQKPGF GYGGRASDYK SAHKGLKGHD AQGTLSRIFK LVRVTAQPPL ENSP00000380958/1-197 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002984/1-170 WGAEGQKPGF GYGGRASDYK SAHKGLKGHD AQGTLSKIFK LGGRDSRSGS ENSTTRP00000003083/1-281 WGAEGQKPGF GYGGRASDYK SGHKGLKGHD AQGTLSRIFK LGGRDGRSGS BACU004422/1-300 WGAEGQKPGF GYGGRASDYK SAHKGLKGHD AQGTLSRIFK LGGRDGRSGS 301 350 bmy_02514T0/1-268 PLTLHPNRPS LPCRHPTTTK ALTAKRVQST PLPAGRNVIR KTDTSEEKTE ENSP00000380958/1-197 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002984/1-170 PMARR----- ---------- ---------- ---------- ---------- ENSTTRP00000003083/1-281 PMARR----- ---------- ---------- ---------- ---------- BACU004422/1-300 PMARR----- ---------- ---------- ---------- ---------- 351 400 bmy_02514T0/1-268 PICYDRSGVL DFPPTVKEHG FAQHPNLHKP TPQIRSLVKT REHA ENSP00000380958/1-197 ---------- ---------- ---------- ---------- ---- ENSBTAP00000002984/1-170 ---------- ---------- ---------- ---------- ---- ENSTTRP00000003083/1-281 ---------- ---------- ---------- ---------- ---- BACU004422/1-300 ---------- ---------- ---------- ---------- ----