KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:46 2014 Check: 00 .. Name: ENSP00000247191/1-846 Len: 892 Check: 3863 Weight: 1.00 Name: ENSBTAP00000003008/1-846 Len: 892 Check: 868 Weight: 1.00 Name: ENSTTRP00000003116/1-827 Len: 892 Check: 2473 Weight: 1.00 Name: bmy_08093T0/1-877 Len: 892 Check: 4875 Weight: 1.00 Name: BACU015363/1-859 Len: 892 Check: 4878 Weight: 1.00 // 1 50 ENSP00000247191/1-846 ---------- ---------- ---------- --------MS SSHFASRHRK ENSBTAP00000003008/1-846 ---------- ---------- ---------- --------MS SSHFASRHRK ENSTTRP00000003116/1-827 ---------- SEAAVVFQAQ RVPLLLVWLR FHARSCLRMA SSHFASRHKK bmy_08093T0/1-877 MKKEEEEEEE EEEEEDEDEE EESCFQILKK K-------MA SSHFASRHRK BACU015363/1-859 ---------- -----MMLVS GLSCATTW-- --------MA SSHFANRHRK 51 100 ENSP00000247191/1-846 DISTEMIRTK IAHRKSLSQK ENRHKEYERN RHFGLKDVNI PTLEGRILVE ENSBTAP00000003008/1-846 DLSTDMIRTK IAHRKSLSQK ENRHKEYERN RHFGLKDVNI PTLESRSLLE ENSTTRP00000003116/1-827 QLSTDMIRTK IAHRKSLSQK ENRHKEYERN RHFGLKDVNV PTLEGRILLE bmy_08093T0/1-877 ELSTDMIRTK IAHRKSLSQK ANRHKEYERN RHFGLKDVNV PTLEGRILLE BACU015363/1-859 ELSTDMIRTK IAHRKSLSQK ENRHKEYERN RHFGLKDVNV PTLEGRFLLE 101 150 ENSP00000247191/1-846 LDETSQGLVP EKTNVKPRAM KTILGDQRKQ MLQKYKEEKQ LQKLKEQREK ENSBTAP00000003008/1-846 LDETSQELVP EKASIKPKST KTVVFDQRKQ MLQKYKEEKQ LQKLKEQREK ENSTTRP00000003116/1-827 LDEISHELVP EKADVKPKSV KTILGDQRKQ MLQKYKEEKQ LQKLKEQREK bmy_08093T0/1-877 LDETSHELVP EKADVKTKSV KTILGDQRKQ MLQKYKEEKQ LQKLKEQREK BACU015363/1-859 LDETSHELVP EKANVKTKSV KTILGDQRKQ MLQKYKEEKQ LQKLKEQREK 151 200 ENSP00000247191/1-846 AKRGIFKVGR YRPDMPCFLL SNQNAVKAEP KKAIPSSVRI TRSKAKDQME ENSBTAP00000003008/1-846 TKRGVFKVGL YKPDMPCFLF SNQNAMKAEP KKDVPSSVRI TRSKARNQME ENSTTRP00000003116/1-827 AKRGVFKVGL YRPDIPSFLF SNQSTMKAEP KKXXXXXXXX XXXXXXXXXX bmy_08093T0/1-877 AKRGVFKVGL YRPDIPCFLF SNQTTMKAEP KKAVPSSVRI TRSKAKDQME BACU015363/1-859 AKRGVFKVGL YRPDIPCFLF SNQSTMKAEP KKAVPSSVRI TRSKAKDQME 201 250 ENSP00000247191/1-846 QTKIDNESDV RAIRPGPRQT SEKKVSDKEK KVVQPVMPTS LRMTRSATQA ENSBTAP00000003008/1-846 LTKSGNGIDV RAIRPGQRQT SEKKVLDKEK KAVQPVML-P VRMTRSSTQA ENSTTRP00000003116/1-827 XXXIDNGSDV RAIRPGQRQA SEKKVLDKEK KAIQPVMP-P VRMTRSATQA bmy_08093T0/1-877 LTKIDNGSDV RTIRPGQRQA SEKKVLDKEK KAIQPVMP-P VRMTRSATQA BACU015363/1-859 LTKIDNGSDV RTIRPSQRQA SEKKVLDKEK KAIQPVMP-P VRMTRSATQA 251 300 ENSP00000247191/1-846 AKQVPRTVSS TTARKPVTRA ANENEPEGKV PSKGRPAKNV ETKPDKGISC ENSBTAP00000003008/1-846 AKQIVKEIPS TAARKPESRA VNDNEADRKA PNQGKPAKKI GTKPDKVISF ENSTTRP00000003116/1-827 AKQIARTVPP TTARKPVTRA TNVNEAETEA PNQGRPAKKI ETKPDKAISF bmy_08093T0/1-877 AKQIARTVPP TTARKPVTRA TNDNEAETEA PNQGRPAKKI ETKPDKAISF BACU015363/1-859 AKQIARTVLP TTARKPVTRA TNDNEAETEA PNQGRPAKKI ETKPDKAISF 301 350 ENSP00000247191/1-846 KVDSEENTLN SQTNATSGMN PDGVLSKMEN LPEINTAKIK GKNSFAPKDF ENSBTAP00000003008/1-846 KVDNEENTLD SQTSATNGMN PDGVLSKMEN VSKTNSAKMK GKNSFAPKDF ENSTTRP00000003116/1-827 KVDSEESTLD SQTSTTIGMD PDGVLSKMEN LSKTNSAKMK GKNSFAPKDF bmy_08093T0/1-877 KVDSEESTLD SQTSTTIGMD LDGVXSKMEN LSKTNSAKMK GKNSFAPKDF BACU015363/1-859 KVDSEESTLD SQTSTTIGMD PDGVLSKMEN LSKTNSAKMK GKNSFAPKDF 351 400 ENSP00000247191/1-846 MFQPLDGLKT YQVTPMTPRS ANAFLTPSYT WTPLKTEVDE SQATKEILAQ ENSBTAP00000003008/1-846 IFQPLDGLKT YQVTPMTPRS ANAFLTPSYT WTPLNTEVDK TEATKEILAQ ENSTTRP00000003116/1-827 MFQPLDGLKT YQVTPMTPRS ASAFLTPSYT WTPLNTEVDK TVATKEILAQ bmy_08093T0/1-877 MFQPLDGLKT YQVTPMTPRS ASAFLTPSYT WTPLNTEVDK TEATKEILAQ BACU015363/1-859 MFQPLDGLKT YQVTPMTPRS ASAFLTPSYT WTPLNTEVDK TEATKEILAQ 401 450 ENSP00000247191/1-846 KCKTYSTKTI QQDSNKLPCP LGPLTVWHEE HVLNKNEATT KNLNGLPIK- ENSBTAP00000003008/1-846 KCKTFSAKTV PQDSSKSQCP LGSLTVWNKE HVSNKNETTN ENSNGLSGKE ENSTTRP00000003116/1-827 KCKTFSAKTV HQDSSKLQCP LGSLTVWNKE HVLNKNESTN KNSDGLSIKE bmy_08093T0/1-877 KCKTFSAKTV HQDSSKLQCP LGSLTVWNKE HVLNKNETTN KNSDGLSIKE BACU015363/1-859 KCKTFSAKTV HQDSSKLQCP SGSLTVWNKD HVLNKNETTN KNSDGLSIKE 451 500 ENSP00000247191/1-846 EVPSLERNEG RIAQPHHGVP YFRNILQSET EKLTSHCFEW DRKLELDIPD ENSBTAP00000003008/1-846 EVPSLEVNED QLSQPQHDVP YFRNILRSET EKLTSHCLEW DRKLDLDIPD ENSTTRP00000003116/1-827 EVPSLEVNQD QISQPQHDVP YFRNTLQSET EKLTSHCLEW DRKLELDIPD bmy_08093T0/1-877 EVPSLEVNED QISQPQHDVP YFRNILQSET EKLTSHCLEW DRKLELDIPD BACU015363/1-859 EVPSLEVHAD QVSQPQHDVP YFRNILQSET EKLTSHCLEW DRKLELDIPD 501 550 ENSP00000247191/1-846 DAKDLIRTAV GQTRLLMKER FKQFEGLVDD CEYKRGIKET TCTDLDGFWD ENSBTAP00000003008/1-846 DAKDLIRTAV GQTRLLMKER FKQFEGLVDN CEYKRGEKET TCTDLDGFWD ENSTTRP00000003116/1-827 DAKDLIRTAV GQTR-LMKER FKQFEGLVDN CEYKRGEKET TCTDLDGFWD bmy_08093T0/1-877 DAKDLIRTAV GQTRLLMKER FKQFEGLVDN CEYKRGEKET TCTDLDGFWD BACU015363/1-859 DAKDLIRTAV GQTRLLMRER FKQFEGLVDN CEYKRGEKET TCTDLDGFWD 551 600 ENSP00000247191/1-846 MVSFQIEDVI HKFNNLIKLE ESGWQVNNNM NHNMNKNVFR KKVVSGIASK ENSBTAP00000003008/1-846 MVSFQIEDVN QKFSNLTKLE ESGWQNNN-- --NTSKKVFR KKVVSGIASK ENSTTRP00000003116/1-827 MLSFQVEDVN QKFNNLTKLE ESGWQNNN-- --NTSKKVFR KKVVSGIVSK bmy_08093T0/1-877 MLSFQIEDVN QKFNNLTKLE ESGWQNNN-- --NTSKKVFR KKVVSGIASK BACU015363/1-859 MLSFQIEDIN QKFNNLTKLE ESGWQNNN-- --NTSKKVFR KKVVSGIASK 601 650 ENSP00000247191/1-846 PKQDDAGRIA ARNRLAAIKN AMRERIRQEE CAETAVSVIP KEVDKIVFDA ENSBTAP00000003008/1-846 PKQDDGGRIA ARNRLAAIKN AMRERIKQEE QAEAATSVMP KEVDKIVFDA ENSTTRP00000003116/1-827 PKQDDGGRIA ARNRLAAIKN AVRERIKQKE HAEAAASAMP KEVDKIVFDA bmy_08093T0/1-877 PKQDDGGRIA ARNRLAAIKN AVRERTKQKE HAEAAASAMP NEVDKIVFDA BACU015363/1-859 PKQDDGGRIA ARNRLAAIKN AVRERIKQKE HAEAAASAMP NEVDKIVFDA 651 700 ENSP00000247191/1-846 GFFRVESPVK LFSGLSVSSE GPSQRLGTPK SVNKAVSQSR NEMGIPQQTT ENSBTAP00000003008/1-846 GFFRIESPIK SFSGL--SSE CLSQRLKTPQ SVSKTVSETR AEMGLIRQTT ENSTTRP00000003116/1-827 GFFRIESPVK SFSGL--SS- CLSH-LRI-K SASKAASESR AEMGVLRQTT bmy_08093T0/1-877 GFFRIESPVK SFSGL--SSE CLSQRLRIPK SVSKAASESR AEMGVLRQTT BACU015363/1-859 GFFRIESPVK SFSGL--SSE CLSQRLRIPK SVSKAASESR AEMGVLRQTT 701 750 ENSP00000247191/1-846 SPENAGPQNT KSEHVKKTLF LSIPESRSSI -EDAQCPGLP DLIEENHVVN ENSBTAP00000003008/1-846 SPENPGPQGA KSEHVDKTLI SCIPGNRNSI GEDAKCLGLQ DLIEINHGIN ENSTTRP00000003116/1-827 SPENPDPQGT KSEHVDKTLI SNIPGNRDSM -GDAKCPG-Q DLIEVNHDVN bmy_08093T0/1-877 SPENPDPQGT KSEHVDKTLI SDITGNRNSI VEDAKCPGLQ DLIEVXHDVN BACU015363/1-859 SPENPDPQGT KSEHADKTLI SDIPGNRNSI VEDAKCPGLQ DLIEVNHDVN 751 800 ENSP00000247191/1-846 KTDLKVDCLS SERMSLPLLA GGVADDINTN KKEGISDVVE GMELNSSITS ENSBTAP00000003008/1-846 KINFEIDCLS SERMNSALHA GKVADDINTN KKEEISDIVE GMELN-SVTT ENSTTRP00000003116/1-827 KINFEINCLP SERMNLALLA GKAADDVNTN KKEEISDVVY GMELN-SITA bmy_08093T0/1-877 KINFEINCLP SERMNLALLA GKVADDVNTN KKEETSDVVY GMELN-SVTA BACU015363/1-859 KINFEINCLP SERMNLALLA GKVADDVNTN KKEEISDVVY GMELN-SVTA 801 850 ENSP00000247191/1-846 QDVLMSSPEK NTASQNSILE EGETKISQSE LFDNKSLTTE CHLLDSPGLN ENSBTAP00000003008/1-846 QDVLMISPEK NIQSQNNISW EEETKTSQPV LCDNKSLTTE CHLLDSPGLN ENSTTRP00000003116/1-827 QDVLMISPEK NVPSQNNISQ EEETKISQSV LFDNKSLTTE CHLLDSR--- bmy_08093T0/1-877 QDVSMISPEK NVPSQNNISQ EEETKISQSV LFDNKSLTAE CHLLDSPGLN BACU015363/1-859 QDVLMISPEK NVPSQNNISQ EEETKISQSV LFDNKSLTTE CHLLDSPGLN 851 900 ENSP00000247191/1-846 CSNPFTQLER RHQEHARHIS FGGNLITFSP LQ------PG EF ENSBTAP00000003008/1-846 YSNTFIQVER RHQEQTRHIS FGGNLISFSP LRPLSGEQPE EF ENSTTRP00000003116/1-827 ---------- ---------- ---------- --------PK LQ bmy_08093T0/1-877 CSNTFTQVER RHQEHTRHIP FGGNLITFSP LRPLSGDQPE EF BACU015363/1-859 CSNTFTQVER RHQEHTRHIP FGGNLITFSP LRPLSGDQPE EF