KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:48 2014 Check: 00 .. Name: bmy_07373T0/1-300 Len: 499 Check: 6165 Weight: 1.00 Name: ENSBTAP00000003022/1-441 Len: 499 Check: 8502 Weight: 1.00 Name: ENSP00000376436/1-485 Len: 499 Check: 6054 Weight: 1.00 Name: BACU010176/1-427 Len: 499 Check: 9812 Weight: 1.00 Name: ENSTTRP00000010295/1-485 Len: 499 Check: 4602 Weight: 1.00 // 1 50 bmy_07373T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003022/1-441 ---------- -------MKA AVDLKPTLTI IKTEKVDMEL FPS------- ENSP00000376436/1-485 MSYFVDSAGS SPVPYSAPRP AVVRQGPSNT YEDPRMNCGF QSNYHQQRPC BACU010176/1-427 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010295/1-485 MSYFVESAVS GPAPYSAVRP AAVRQGPLSS YEDPRMACGF QSTYHPPRAC 51 100 bmy_07373T0/1-300 ---------- ---------- ---------- -------MMS QALKATFSGF ENSBTAP00000003022/1-441 ---------- ---------- PDMECADVPL LTPSSKEMMS QALKATFSGF ENSP00000376436/1-485 YPFWDEMATQ EVPTGLEHCV SDMECADVPL LTPSSKEMMS QALKATFSGF BACU010176/1-427 ---------- ---------- --MECADVPL LTPSSKEMMS QALKATFSGF ENSTTRP00000010295/1-485 YPFWDEMATQ EVPTGLEHCG SDMECADVPL LTPSSKEMMS QALKATFSGF 101 150 bmy_07373T0/1-300 SKEQQRLGIP KDPRQWTETH VRDWVMWAVN EFSLKGVDFQ KFCMNGAALC ENSBTAP00000003022/1-441 SKEQQRLGIP KDPRQWTETH VRDWVMWAVN EFSLKGVDFQ KFCMNGAALC ENSP00000376436/1-485 TKEQQRLGIP KDPRQWTETH VRDWVMWAVN EFSLKGVDFQ KFCMNGAALC BACU010176/1-427 SKEQQRLGIP KDPRQWTETH VRDWVMWAVN EFSLKGVDFQ KFCMNGAALC ENSTTRP00000010295/1-485 SKEQQRLGIP KDPRQWTETH VRDWVMWAVN EFSLKGVDFQ KFCMNGAALC 151 200 bmy_07373T0/1-300 ALGKDCFLEL APDFVGDILW EHLEILQK-- ---------- --EDVKPYQV ENSBTAP00000003022/1-441 ALGKDCFLEL APDFVGDILW EHLEILQK-- ---------- --EDVKPYQV ENSP00000376436/1-485 ALGKDCFLEL APDFVGDILW EHLEILQK-- ---------- --EDVKPYQV BACU010176/1-427 ALGKDCFLEL APDFVGDILW EHLEILQKAS AEKEINKQSR ELEDVKPYQV ENSTTRP00000010295/1-485 ALGKDCFLEL APDFVGDILW EHLEILQK-- ---------- --EDVKPYQV 201 250 bmy_07373T0/1-300 NGVNPPYPES RYTSDYFISY GIEHAQCVPP SEFSEPSFIT ESYQTLHPIS ENSBTAP00000003022/1-441 NGVNPPYPES RYTSDYFISY GIEHAQCVPP SEFSEPSFIT ESYQTLHPIS ENSP00000376436/1-485 NGVNPAYPES RYTSDYFISY GIEHAQCVPP SEFSEPSFIT ESYQTLHPIS BACU010176/1-427 NGVNPPYPES RYTSDYFISY GIEHAQCVPP SEFSEPSFIT ESYQTLHPIS ENSTTRP00000010295/1-485 NGVNPPYPES RYTSDYFISY GIEHAQCVPP SEFSEPSFIT ESYQTLHPIS 251 300 bmy_07373T0/1-300 SEELLSLKYE NDYPSVILRD PLQTDTLQTD YFAIKQEVVT PDNMCMGRTS ENSBTAP00000003022/1-441 SEELLSLKYE NDYSSVILRD TLQTDTLQTD YFAIKQEVVT PDNMCMGRAS ENSP00000376436/1-485 SEELLSLKYE NDYPSVILRD PLQTDTLQND YFAIKQEVVT PDNMCMGRTS BACU010176/1-427 SEELLSLKYE NDYPSVILRD PLQTDTLQTD YFAIKQEVVT PDNMCMGRTS ENSTTRP00000010295/1-485 SEELLSLKYE NDYPSVILRD PLQTDTLQTD YFAIKQEVVT PDNMCMGRTS 301 350 bmy_07373T0/1-300 RGKLGGQDSF ESIESYDSCD RLTQSWSSQS SFNSLQRVPS YDSFDSEDYP ENSBTAP00000003022/1-441 RGKLGGQDSF ESIESYDSCD RLTQSWSSQS SFNSLQRVPS YDSFDSEDYP ENSP00000376436/1-485 RGKLGGQDSF ESIESYDSCD RLTQSWSSQS SFNSLQRVPS YDSFDSEDYP BACU010176/1-427 RGKLGGQDSF ESVESYESCD RLTQSWSSQS SFSSLQRVPS YDSFDSEDYP ENSTTRP00000010295/1-485 RGKLGGQDSF ESIESYDSCD RLTQSWSSQS SFNSLQRVPS YDSFDSEDYP 351 400 bmy_07373T0/1-300 AALPNHKPKG TFKDYVRDRA DLNKDKPVIP AAALAGYTGV ------KVVV ENSBTAP00000003022/1-441 AALPNHKPKG TFKDYVRDRA DLNKDKPVIP AAALAGYTGS GPIQLWQFLL ENSP00000376436/1-485 AALPNHKPKG TFKDYVRDRA DLNKDKPVIP AAALAGYTGS GPIQLWQFLL BACU010176/1-427 AALPNHKPKG TFKDYVRDRA DLNKDKPVIP AAALAGYTGS GPIQLWQFLL ENSTTRP00000010295/1-485 AALPNHKPKG TFKDYVRDRA DLNKDKPVIP AAALAGYTGS GPIQLWQFLL 401 450 bmy_07373T0/1-300 VVNEERS--- ---------- ---------- ---------- ---------- ENSBTAP00000003022/1-441 ELLTDKSCQS FISWTGDGWE FKLSDPDEVA RRWGKRKNKP KMNYEKLSRG ENSP00000376436/1-485 ELLTDKSCQS FISWTGDGWE FKLSDPDEVA RRWGKRKNKP KMNYEKLSRG BACU010176/1-427 ELLTDKSCQS FISWTGDGWE FKLSDPDEVA RRWGKRKNKP KMNYEKLSRG ENSTTRP00000010295/1-485 ELLTDKSCQS FISWTGDGWE FKLSDPDEVA RRWGKRKNKP KMNYEKLSRG 451 500 bmy_07373T0/1-300 ---------- ---------- ---------- ---------- --------- ENSBTAP00000003022/1-441 LRYYYDKNII HKTAGKRYVY RFVCDLQSLL GYTPEELHAM LDVKPDADE ENSP00000376436/1-485 LRYYYDKNII HKTAGKRYVY RFVCDLQSLL GYTPEELHAM LDVKPDADE BACU010176/1-427 LRYYYDKNII HKTAGKRYVY RFVCDLQSLL GYTPEELHAM LDVKPDADE ENSTTRP00000010295/1-485 LRYYYDKNII HKTAGKRYVY RFVCDLQSLL GYTPEELHAM LDVKPDADE