KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:48 2014 Check: 00 .. Name: ENSP00000322249/1-295 Len: 298 Check: 6980 Weight: 1.00 Name: ENSBTAP00000003026/1-291 Len: 298 Check: 5906 Weight: 1.00 Name: bmy_00734T0/1-218 Len: 298 Check: 5556 Weight: 1.00 Name: BACU011947/1-296 Len: 298 Check: 7348 Weight: 1.00 // 1 50 ENSP00000322249/1-295 MKGGEGDAGE QAPLNPEGES PAGSATYREF VHRGYLDLMG ASQHSLRALS ENSBTAP00000003026/1-291 MKGGEGDPGE QAPLNPEAES PAGSATYREF VHRGYLDLMG ASQHSLRALS bmy_00734T0/1-218 ---------- ---------- ---------- ---------- ---------- BACU011947/1-296 MKGGEGDPGE QAPLNPEAES PAGSATYREF VHRGYLDLMG ASQHSLRALS 51 100 ENSP00000322249/1-295 WRRLYLSRAK LKASSRTSAL LSGFAMVAMV EVQLESDHEY PPGLLVAFSA ENSBTAP00000003026/1-291 WRRLYLSRAK LKASSRTSAL LSGFAMVAMV EVQLESKHEY PPGLLVAFSA bmy_00734T0/1-218 ---------- ---------- --------MV EVQLESNHEY PPGLLVAFSA BACU011947/1-296 WRRLYLSRAK LKASSRTSAL LSGFAMVAMV EVQLESNHEY PPGLLVAFSA 101 150 ENSP00000322249/1-295 CTTVLVAVHL FALMVSTCLL PHIEAVSNIH NLNSVHQSPH QRLHRYVELA ENSBTAP00000003026/1-291 CTTVLVAVHL FALMVSTCLL PHIEAVSNIH NLNSVHQSPH QRLHRYVELA bmy_00734T0/1-218 CTTVLVAVHL FALMVSTCLL PHIEAVSNIH NLNSVHQSPH QRLHRYVELA BACU011947/1-296 CTTVLVAVHL FALMVSTCLL PHIEAVSNIH NLNSVHQSPH QRLHRYVELA 151 200 ENSP00000322249/1-295 WGFSTALGTF LFLAEVVLVG WVKFVPIGAP LDTPTPMVPT SRVPGTLAPV ENSBTAP00000003026/1-291 WGFSTALGTF LFLAEVVLVG WVKFVPIGAP LGTSGSVGPA SQ----LPTV bmy_00734T0/1-218 WGFSTALGTF LFLAEVVLVG WVKFVPIGAP LGTQGSVVPA SQVPETLPPV BACU011947/1-296 WGFSTALGTF LFLAEVVLVG WVKFVPIGAP LGTPGSVVPA SQVPETLPPV 201 250 ENSP00000322249/1-295 ATSLSPASNL PRSSASAAPS QAEP--ACPP RQACGGGGA- HGPGWQAAMA ENSBTAP00000003026/1-291 ATSLSPASK- -PSSVSVAPS QAEPPEPCPP RQACGSGAA- HGPGWQAAMA bmy_00734T0/1-218 ATSLSPASK- -PSSASVAPS QAEPPEACPP RQACGGGGGA HGPGWQAAMA BACU011947/1-296 ATSLSPASK- -PSSASVAPS QAEPPEACPP RQACGGGGGA HGPGWQAAMA 251 300 ENSP00000322249/1-295 STAIMVPVGL VFVAFALHFY RSLVAHKTDR YKQELEELNR LQGELQAV ENSBTAP00000003026/1-291 STAIMVPVGL VFVAFALHFY RSLVAHKTDR HKQELEELSR LQGELQAV bmy_00734T0/1-218 STAIMVPVGL VFMAFAFHFY RSLVAHKTDR HKQELEELSR LQGELQAV BACU011947/1-296 STAIMVPVGL VFMAFALHFY RSLVAHKTDR HKQELEELSR LQGELQAV