KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:51 2014 Check: 00 .. Name: ENSBTAP00000003031/1-322 Len: 332 Check: 5741 Weight: 1.00 Name: ENSP00000222812/1-288 Len: 332 Check: 5514 Weight: 1.00 Name: ENSTTRP00000007962/1-288 Len: 332 Check: 7305 Weight: 1.00 Name: bmy_00372T0/1-298 Len: 332 Check: 4410 Weight: 1.00 Name: BACU012020/1-280 Len: 332 Check: 7586 Weight: 1.00 // 1 50 ENSBTAP00000003031/1-322 ---------- MKDRTQELRT AKDSDDDDDV TVTVDRDRFM DEFFEQVEEI ENSP00000222812/1-288 ---------- MKDRTQELRT AKDSDDDDDV AVTVDRDRFM DEFFEQVEEI ENSTTRP00000007962/1-288 ---------- MKDRTQELRT AKDSDDDDDV TVTVDRDRFM DEFFEQVEEI bmy_00372T0/1-298 VQRDPVVLAQ VCSCVHTPVQ AKDSDDDDDV TVTVDRDRFM DEFFEQVEEI BACU012020/1-280 ---------- --------VQ AKDSDDDDDV TVTVDRDRFM DEFFEQVEEI 51 100 ENSBTAP00000003031/1-322 RGFIDKISEN VEEVKRKHSA ILASPNPDEN KGGAGGTHVR HKEDCKQSPL ENSP00000222812/1-288 RGFIDKIAEN VEEVKRKHSA ILASPNPDE- ---------K TKEELEELMS ENSTTRP00000007962/1-288 RGFIDKISEN VEEVKRKHSA ILASPNPDE- ---------K TKEELEELMS bmy_00372T0/1-298 RGFIDKISEN VEEVKRKHSA ILASPNPDE- ---------K TKEELEELMS BACU012020/1-280 RGFIDKISEN VEEVKRKHSA ILASPNPDE- ---------K TKEELEELMS 101 150 ENSBTAP00000003031/1-322 QVKEQHESLQ GRFRTRSRVC GPRGSGERGR LSAAGCSPGI EQSIEQEEGL ENSP00000222812/1-288 DIKKTANKVR SKLKS----- ---------- ---------I EQSIEQEEGL ENSTTRP00000007962/1-288 DIKKTANKVR SKLKS----- ---------- ---------I EQSIEQEEGL bmy_00372T0/1-298 DIKKTANKVR SKLKS----- ---------- ---------I EQSIEQEEGL BACU012020/1-280 DIKKTANKVR SKLKS----- ---------- ---------I EQSIEQEEGL 151 200 ENSBTAP00000003031/1-322 NRSSADLRIR KTQHSTLSRK FVEVMSEYNA TQSDYRERCK GRIQRQLEIT ENSP00000222812/1-288 NRSSADLRIR KTQHSTLSRK FVEVMSEYNA TQSDYRERCK GRIQRQLEIT ENSTTRP00000007962/1-288 SRSSADLRIR KTQHSTLSRK FVEVMSEYNT TQTDYRERCK GRIQRQLEIT bmy_00372T0/1-298 SRSSADLRIR KTQHSTLSRK FVEVMSEYNA TQTDYRERCK GRIQRQLEIT BACU012020/1-280 SRSSADLRIR KTQHSTLSRK FVEVMSEYNA TQTDYRERCK GRIQRQLEIT 201 250 ENSBTAP00000003031/1-322 GRTTTSEELE DMLESGNPAI FASGIIMDSS ISKQALSEIE TRHSEIIKLE ENSP00000222812/1-288 GRTTTSEELE DMLESGNPAI FASGIIMDSS ISKQALSEIE TRHSEIIKLE ENSTTRP00000007962/1-288 GRTTTSEELE DMLESGNPAI FASGIIMDSS ISKQALSEIE TRHSEIIKLE bmy_00372T0/1-298 GRTTTSEELE DMLESGNPAI FASGIIMDSS ISKQALSEIE TRHSEIIKLE BACU012020/1-280 GRTTTSEELE DMLESGNPAI FASGIIMDSS ISKQALSEIE TRHSEIIKLE 251 300 ENSBTAP00000003031/1-322 NSIRELHDMF MDMAMLVESQ GEMIDRIEYN VEHSVDYVER AVSDTKKAVK ENSP00000222812/1-288 NSIRELHDMF MDMAMLVESQ GEMIDRIEYN VEHAVDYVER AVSDTKKAVK ENSTTRP00000007962/1-288 SSIRELHDMF TDMALLVESQ GEMIDRIEYN VEHSVDYVER AVSDTKKAVK bmy_00372T0/1-298 NSIRELHDMF MDMAMLVESQ GEMIDRIEYN VEHSVDYVER AVSDTKKAVK BACU012020/1-280 NSIRELHDMF TDMAMLVESQ GEMIDRIEYN VEHSVDYVER AVSDTKKAVK 301 350 ENSBTAP00000003031/1-322 YQSKARRKKI MIVICCVVLG IVIASTFGGI FG ENSP00000222812/1-288 YQSKARRKKI MIIICCVILG IVIASTVGGI FA ENSTTRP00000007962/1-288 YQSKARRKKI MIIICCVVLG IIIASTFGGI FG bmy_00372T0/1-298 YQSKARRKKI MIIICCVVLG IVIASTFGGI FG BACU012020/1-280 YQSKARRKKI MIIICCVVLG IVIASTFGGI FG