KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:51 2014 Check: 00 .. Name: ENSTTRP00000005523/1-722 Len: 727 Check: 9881 Weight: 1.00 Name: BACU016668/1-704 Len: 727 Check: 8882 Weight: 1.00 Name: bmy_02617T0/1-723 Len: 727 Check: 1342 Weight: 1.00 Name: ENSBTAP00000003033/1-724 Len: 727 Check: 5962 Weight: 1.00 // 1 50 ENSTTRP00000005523/1-722 MAGAEGFQYR ALYPFCRERP EDLELLPGDV LVVSRAALQA LGVAEGSERC BACU016668/1-704 MAGAEGFQYR ALYPFCRERP EDLELLPGDV LVVSRAALQA LGVAEGSERC bmy_02617T0/1-723 MAGAEGFQYR ALYPFRRERP EDLELLPGDV LVVSRAALQA LGVAEGSERC ENSBTAP00000003033/1-724 MAGPEGFQYR ALYPFRRERP EDLELLPGDV LVVSRAALQA LGVAEGNERC 51 100 ENSTTRP00000005523/1-722 PQSVGWMPGL NERTRQRGDF PGTYVEFLGP VTLTRPGPRP RGPRPLPARP BACU016668/1-704 PQSVGWMPGL NERTRQRGDF PGTYVEFLGP VTLARPGPRP RGPRPLPARP bmy_02617T0/1-723 PQSVGWMPGL NERTRQRGDF PGTYVEFLGP VTLARPGPRP RGPRPLPARP ENSBTAP00000003033/1-724 PQSVGWMPGL NERTRQRGDF PGTYVEFLGP VALARPGPRP RGPRPLPARP 101 150 ENSTTRP00000005523/1-722 RDGPPEPGLT LPDLPEQFSP PDVAPPILVK LVEAIERTGL DSYRPEAPAA BACU016668/1-704 RDGPPEPGLT LPDLPEQFSP PDVAPPILVK LVEAVERTGL DSYRPEAPAA bmy_02617T0/1-723 RDGPPEPGLT LPDLPEQFSP PDVAPPILVK LVEAIERTGL DSYRPEAPAT ENSBTAP00000003033/1-724 RDGPPEPGLT LPDLPEQFSP PDVAPPILVK LVEAIERTGL DSYRPEPPAV 151 200 ENSTTRP00000005523/1-722 RTDWSLNDME QWDAAALTDG VKGFLLALPA PLVTPEAAAE AHRALREAAG BACU016668/1-704 RTDWSLSDME QWDAAALTDG VKGFLLALPA PLVTPEAAAE AHRALRVVGL bmy_02617T0/1-723 RTDWSLSDME QWDAAALTDG VKGFLLALPA PLVTPEAAAE AHRALREAAG ENSBTAP00000003033/1-724 RTDWSLSDVE QWDAAALSDG VKGFLLALPA PLVTPEAAAE AHRALREAAG 201 250 ENSTTRP00000005523/1-722 PVGPALEPPT LPLHSALTLR FLLQHLGRVA RRAPALGPAV -RALSTAFGP BACU016668/1-704 PHQPA-SPTL LPLTCF---- ----HIDPPP DAQAHAGPCA HQALPSAHHT bmy_02617T0/1-723 PVGPALEPPT LPLHSALTLR FLLQHLGRVA RRAPALGPAV -RALSAAFGP ENSBTAP00000003033/1-724 PVGPALEPPT LPLHHALTLR FLLQHLGRVA GRAPAPGPAV -RALGATFGP 251 300 ENSTTRP00000005523/1-722 LLLRAPSLS- PPPGGAPDGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU016668/1-704 SL-------- ------PRRT EATPDFPALL VEKLLQEHLE EQEIAPPALP bmy_02617T0/1-723 LLLRAPSPP- PPPGGAPDGT EATPDLPALL VEKLLQEHLE EQEIAPPALP ENSBTAP00000003033/1-724 LLLRAPPPPS PPPGGAPDGT EPTPDFPALL VEKLLQEHLE EQEVAPPALP 301 350 ENSTTRP00000005523/1-722 XXXXXXXXXX XXXXXXXXXX XXXXXXXYWG DISREEVNEK LRDS-DGTFL BACU016668/1-704 PKPPKAKPAP TGLVNGGNPP SLQDAEWYWG DISREEVNEK LRDTPDGTFL bmy_02617T0/1-723 PKPPKAKPAP TGLVNGGNPP SLQDAEWYWG DISREEVNEK LRDTPDGTFL ENSBTAP00000003033/1-724 PKPPKTKPAP TGLANGGSPP SLQDAEWYWG DISREEVNEK LRDTPDGTFL 351 400 ENSTTRP00000005523/1-722 VRDASSKIQG EYTLTLRKGG NNKLIKVFHR DGHYGFSEPL TFCSVVDLIT BACU016668/1-704 VRDASSKIQG EYTLTLRKGG NNKLIKVFHR DGHYGFSEPL TFCSVVDLIT bmy_02617T0/1-723 VRDASSKIQG EYTLTLRKGG NNKLIKVFHR DGHYGFSEPL TFCSVVDLIT ENSBTAP00000003033/1-724 VRDASSKIQG EYTLTLRKGG NNKLIKVFHR DGHYGFSEPL TFCSVVDLIT 401 450 ENSTTRP00000005523/1-722 HYRHESLAQY NAKLDTRLLY PVSKYQQDQI VKEDSVEAVG AQLKVYHQQY BACU016668/1-704 HYRHESLAQY NAKLDTRLLY PVSKYQQDQI VKEDSVEAVG AQLKVYHQQY bmy_02617T0/1-723 HYRHESLAQY NAKLDTRLLY PVSKYQQDQI VKEDSVEAVG AQLKVYHQQY ENSBTAP00000003033/1-724 HYRHESLAQY NAKLDTRLLY PVSKYQQDQI VKEDSVEAVG AQLKVYHQQY 451 500 ENSTTRP00000005523/1-722 QDKSREYDQL YEEYTRTSQE LQMKRTAIEA FNETIKIFEE QGQTQEKCSK BACU016668/1-704 QDKSREYDQL YEEYTRTSQE LQMKRTAIEA FNETIKIFEE QGQTQEKCSK bmy_02617T0/1-723 QDKSREYDQL YEEYTRTSQE LQMKRTAIEA FNETIKIFEE QGQTQEKCSK ENSBTAP00000003033/1-724 QDKSREYDQL YEEYTRTSQE LQMKRTAIEA FNETIKIFEE QGQTQEKCSK 501 550 ENSTTRP00000005523/1-722 EYLERFRREG NEKEMQRILL NS--ERLKSR IAEIHESRTK LEQELRAQAS BACU016668/1-704 EYLERFRREG NEKEMQSLGF RGREERLKSR IAEIHESRTK LEQELRAQAS bmy_02617T0/1-723 EYLERFRREG NEKEMQRILL NS--ERLKSR IAEIHESRTK LEQELRAQAS ENSBTAP00000003033/1-724 EYLERFRREG NEKEMQRILL NS--ERLKSR IAEIHESRTK LEQELRAQAS 551 600 ENSTTRP00000005523/1-722 DNREIDKRMN SLKPDLMQLR KIRDQYLVWL TQKGARQKKI NEWLGIKNET BACU016668/1-704 DNREIDKRMN SLKPDLMQLR KIRDQYLVWL TQKGARQKKI NEWLGIKNET bmy_02617T0/1-723 DNREIDKRMN SLKPDLMQLR KIRDQYLVWL TQKGARQKKI NEWLGIKNET ENSBTAP00000003033/1-724 DNREIDKRMN SLKPDLMQLR KIRDQYLVWL TQKGARQKKI NEWLGIKNET 601 650 ENSTTRP00000005523/1-722 EDQYSLMEDE DDLPHHEERT WYVGKINRTQ AEEMLSGKRD GTFLIRESSQ BACU016668/1-704 EDQYSLMEDE DDLPHHEERT WYVGKINRTQ AEEMLSGKRD GTFLIRESSQ bmy_02617T0/1-723 EDQYSLMEDE DDLPHHEERT WYVGKINRTQ AEEMLSGKRD GTFLIRESSQ ENSBTAP00000003033/1-724 EDQYSLMEDE DDLPHHEERT WYVGKINRTQ AEEMLSGKRD GTFLIRESSQ 651 700 ENSTTRP00000005523/1-722 RGCYACSVVV DGDTKHCVIY RTATGFGFAE PYNLYGSLKE LVLHYQHASL BACU016668/1-704 RGCYACSVVV DGDTKHCVIY RTATGFGFAE PYNLYGSLKE LVLHYQHASL bmy_02617T0/1-723 RGCYACSVVV DGDTKHCVIY RTATGFGFAE PYNLYGSLKE LVLHYQHASL ENSBTAP00000003033/1-724 RGCYACSVVV DGDTKHCVIY RTATGFGFAE PYNLYGSLKE LVLHYQHASL 701 750 ENSTTRP00000005523/1-722 VQHNDALTVT LAHPVRAPGP GPPPATR BACU016668/1-704 VQHNDALTVT LAHPVRAPGP GPPPATR bmy_02617T0/1-723 VQHNDALTVT LAHPVRAPGP GPPPATR ENSBTAP00000003033/1-724 VQHNDALTVT LAHPVRAPGP GPPPAAR