KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:53 2014 Check: 00 .. Name: bmy_02391T0/1-523 Len: 709 Check: 3872 Weight: 1.00 Name: ENSBTAP00000003052/1-703 Len: 709 Check: 3319 Weight: 1.00 Name: BACU009870/1-708 Len: 709 Check: 284 Weight: 1.00 Name: ENSTTRP00000006242/1-701 Len: 709 Check: 8972 Weight: 1.00 // 1 50 bmy_02391T0/1-523 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003052/1-703 MKRCKSDELQ QQQGEEDGAG LEDAACHLPG ADIRPGEAAG ANSAGGPTSD BACU009870/1-708 MKRCKSDELQ QQQGEEDGAG LEDAACHLPG ADLRPGEATG ANSAGGPTSD ENSTTRP00000006242/1-701 MKRCKSDELQ QQQGEEDGAG LEDAACHLPG ADLRPGEATG ANSAGGPTLD 51 100 bmy_02391T0/1-523 ---MAAAEPG SSGTPA---- ---------- ---------- -RRPR----- ENSBTAP00000003052/1-703 AGAAAAPNPG PRSKPPDLKK IQQLSEGSMF GHGLKHLFHS RRRSREREHP BACU009870/1-708 AGAAAAPNPG PRSKPPDLKK IQQLSEGSMF GHGFKHLFHG RRRSREREHQ ENSTTRP00000006242/1-701 AGAAAAPNPG PRSKPPDLKK IQQLSEGSMF GHGFKHLFHG RRRSREREHP 101 150 bmy_02391T0/1-523 ---------- ---------- ---------- ----LSL--- ---------- ENSBTAP00000003052/1-703 SSQDPQQQ-Q QGMSDHESPD EKERSPEMHR VSYAMSLHDL PARPTAFNRV BACU009870/1-708 TSQDSQQQHQ QGMSDHDSPD EKERSPEMHR VSYAMSLHDL PARPTAFNRV ENSTTRP00000006242/1-701 TSQDSQQQHQ QGMSDHDSPD EKERSPEMHR VSYAMSLHDL PARPTAFNRV 151 200 bmy_02391T0/1-523 -----ASPVL PRDCD----- ----PGGLAQ PAESWGL--- --------RA ENSBTAP00000003052/1-703 LQQIRARPSI KRGASLH--- --GGGGGGSR RAKSSSLEPQ RGSPHLLRKT BACU009870/1-708 LQQIRSRPSI KRGASLHSSS GSGGSGGSSR RTKSSSLEPQ LGSPHLLRKT ENSTTRP00000006242/1-701 LQQIRSRPSI KRGASLHSSS GGGGSGGSSR RTKSSSLEPQ RGSPHLLRKA 201 250 bmy_02391T0/1-523 PGTPSPARLW ---------- ---------- ---------- ETVPTQVDKG ENSBTAP00000003052/1-703 PQDSGLAAIL HQHQGRPRSS STTDTALLLP DGGSLLAEEA EGLGDKVDKG BACU009870/1-708 PQDSSLAAIL HQHQCRPRSS STTDTALLLA DGGNLLAEEA EGLSDKVDKG ENSTTRP00000006242/1-701 PQDSSLAAIL HQHQCRPRSS STTDTSLLLA DGGNLLAEEA EGLSDKVDKG 251 300 bmy_02391T0/1-523 DLVALSLPGG PGHGDTDGPI SLDVPDGAPD PQRTKAAIDH LHQKILKITE ENSBTAP00000003052/1-703 DFLALNLAGG PGHGDADGPI SLDVPDGAPD PQRTKAAIEH LHQKILKITE BACU009870/1-708 DLVALSLPGG PGHGDTDGPI SLDVPDGAPD PQRTKAAIDH LHQKILKITE ENSTTRP00000006242/1-701 DLAALSLPGG PGHGDADGPI SLDVPDGAPD PQRTKAAIDH LHQKILKITE 301 350 bmy_02391T0/1-523 QIKIEQEARD DNVAEYLKLA NNADKQQVSR IKQVFEKKNQ KSAQTIAQLH ENSBTAP00000003052/1-703 QIKIEQEARD DNVAEYLKLA NNADKQQASR IKQVFEKKNQ KSAQTIAQLH BACU009870/1-708 QIKIEQEARD DNVAEYLKLA NNADKQQVSR IKQVFEKKNQ KSAQTIAQLH ENSTTRP00000006242/1-701 QIKIEQEARD DNVAEYLKLA NNADKQQVSR IKQVFEKKNQ KSAQTIAQLH 351 400 bmy_02391T0/1-523 KKLEHYRRRL KEIEQNGPSR QPKDVLRDMQ QGLKDVGANM RAGISGFGGG ENSBTAP00000003052/1-703 KKLEHYRRRL REIEQNGPSR QPKDVLRDMQ QGLKDVGANV RAGISGFGGG BACU009870/1-708 KKLEHYRRRL REIEQNGPSR QPKDVLRDMQ QGLKDVGANM RAGISGFGGG ENSTTRP00000006242/1-701 KKLEHYRRRL KEIEQNGPSR QPKDVLRDMQ QGLKDVGANM RAGISGFGGG 401 450 bmy_02391T0/1-523 VVEGVKGSLS GLSQATHTAV VSKPREFASL IRNKFGSADN IAHLKDPLDD ENSBTAP00000003052/1-703 VVEGVKGSLS GLSQATHSAV VSKPREFASL IRNKFGSADN IAHLKDPLDD BACU009870/1-708 VVEGVKGSLS GLSQATHTAV VSKPREFASL IRNKFGSADN IAHLKDPLDD ENSTTRP00000006242/1-701 VVEGVKGSLS GLSQATHTAV VSKPREFASL IRNKFGSADN IAHLKDPLDD 451 500 bmy_02391T0/1-523 GPPEEAARAL SGSATLVSSP KYGSDDECSS ASASSAGAGS NSGAGPAAAL ENSBTAP00000003052/1-703 GPPEEAARAL SGSATLVSSP KYASDDECSS ASASSAGAGS NSGAGPAAAA BACU009870/1-708 GPPEEAARAL SGSATLVSSP KYGSDDECSS ASASSAGAGS NSGAGPAAAL ENSTTRP00000006242/1-701 GPPEEAARAL SGSATLVSSP KYGSDDECSS ASASSAGAGS NSGAGPAAAL 501 550 bmy_02391T0/1-523 -GSPKSNMLY GAPGNLDAVL EELREIKEGQ SHLEDSMEDL KAQLQRDYTY ENSBTAP00000003052/1-703 PGSPKSGQLY GAPGNVDAVL EELREIKEGQ SHLEDSMEDL KAQLQRDYTY BACU009870/1-708 -GSPKSNMLY GAPGNLDAVL EELREIKEGQ SHLEDSMEDL KAQLQRDYTY ENSTTRP00000006242/1-701 -GSPKSNMLY GAPGNMDAVL EELREIKEGQ SHLEDSMEDL KAQLQRDYTY 551 600 bmy_02391T0/1-523 MTQCLQEERY RYERLEEQLN DLTELHQNEM TNLKQELASM EEKVAYQSYE ENSBTAP00000003052/1-703 MTQCLQEERY RYERLEEQLN DLTELHQNEM TNLKQELASM EEKVAYQSYE BACU009870/1-708 MTQCLQEERY RYERLEEQLN DLTELHQNEM TNLKQELASM EEKVAYQSYE ENSTTRP00000006242/1-701 MTQCLQEERY RYERLEEQLN DLTELHQNEM TNLKQELASM EEKVAYQSYE 601 650 bmy_02391T0/1-523 RARDIQEAVE SCLTRVTKLE LQQQQQQVVQ LEGVENANAR ALLGKFINVI ENSBTAP00000003052/1-703 RARDIQEAVE SCLTRVTKLE LQQQQQQVVQ LEGVENANAR ALLGKFINVI BACU009870/1-708 RARDIQEAVE SCLTRVTKLE LQQQQQQVVQ LEGVENANAR ALLGKFINVI ENSTTRP00000006242/1-701 RARDIQEAVE SCLTRVTKLE L-QQQQQVVQ LEG-ENANAR ALLGKFINVI 651 700 bmy_02391T0/1-523 LALMAVLLVF VSTLANFITP LMKTRLRITS TALLVLVLFL LWKHWDSLTY ENSBTAP00000003052/1-703 LALMAVLLVF VSTVASFITP LMKTRLRVSS TALLALVLLL LWKHWDSLTY BACU009870/1-708 LALMAVLLVF VSTLANFITP LMKTRLRITS TALLVLVLFL LWKHWDSLTY ENSTTRP00000006242/1-701 LALMTVLLM- ---VPTLIPP LMKTRLRITS TA-LVLVLFL LWRHWDSLTY 701 750 bmy_02391T0/1-523 LLQHVLLPS ENSBTAP00000003052/1-703 LLEHVLLPS BACU009870/1-708 LLQHVLLPS ENSTTRP00000006242/1-701 LLQHVLLPS