KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:54 2014 Check: 00 .. Name: bmy_08888T0/1-146 Len: 252 Check: 2685 Weight: 1.00 Name: ENSTTRP00000006870/1-248 Len: 252 Check: 7821 Weight: 1.00 Name: ENSP00000362334/1-201 Len: 252 Check: 3132 Weight: 1.00 Name: BACU009662/1-201 Len: 252 Check: 3475 Weight: 1.00 Name: ENSBTAP00000003072/1-201 Len: 252 Check: 3713 Weight: 1.00 // 1 50 bmy_08888T0/1-146 ---------- ---------- ---------- ---------M GKACSLA--- ENSTTRP00000006870/1-248 RIFARLCCLT GEVEKPASPG LHRTCSPRPP ATMEYLIGIQ GPDYVLVASD ENSP00000362334/1-201 ---------- ---------- ---------- --MEYLIGIQ GPDYVLVASD BACU009662/1-201 ---------- ---------- ---------- --MEYLIGIQ GPDYVLVASD ENSBTAP00000003072/1-201 ---------- ---------- ---------- --MEYLIGIQ GPDYVLVASD 51 100 bmy_08888T0/1-146 ---------- ---------- -------TVA NARGKTHFAE --KKEVILH- ENSTTRP00000006870/1-248 RVAASNIVQM KDDHDKMFKM SEKILLLCVG EAGDTVQFAE YIQKNVQLYK ENSP00000362334/1-201 RVAASNIVQM KDDHDKMFKM SEKILLLCVG EAGDTVQFAE YIQKNVQLYK BACU009662/1-201 RVAASNIVQM KDDHDKMFKM SEKILLLCVG EAGDTVQFAE YIQKNVQLYK ENSBTAP00000003072/1-201 RVAASNIVQM KDDHDKMFKM SEKILLLCVG EAGDTVQFAE YIQKNVQLYK 101 150 bmy_08888T0/1-146 -------GSL TTDAWEHR-- ----RAMTPY HVNLLLAGYD EHEGPALYYM ENSTTRP00000006870/1-248 MRNGYELSPT AAANFTRRNL ADYLRSRTPY HVNLLLAGYD EHEGPALYYM ENSP00000362334/1-201 MRNGYELSPT AAANFTRRNL ADCLRSRTPY HVNLLLAGYD EHEGPALYYM BACU009662/1-201 MRNGYELSPT AAANFTRRNL ADYLRSRTPY HVNLLLAGYD EHEGPALYYM ENSBTAP00000003072/1-201 MRNGYELSPT AAANFTRRNL ADYLRSRTPY HVNLLLAGYD EHEGPALYYM 151 200 bmy_08888T0/1-146 DYLAALAKAP FAAHGYGAFL TLSILDRYYT PAISREKAVE LLRKCLEE-P ENSTTRP00000006870/1-248 DYLAALAKAP FAAHGYGAFL TLSILDRYYT PTISREKAVE LLRKCLEEGP ENSP00000362334/1-201 DYLAALAKAP FAAHGYGAFL TLSILDRYYT PTISRERAVE LLRKCLEE-L BACU009662/1-201 DYLAALAKAP FAAHGYGAFL TLSILDRYYT PTISREKAVE LLRKCLEE-L ENSBTAP00000003072/1-201 DYLAALAKAP FAAHGYGAFL TLSILDRYYT PTISREKAVE LLRKCLEE-L 201 250 bmy_08888T0/1-146 KDELEF---- ----VVYQEA VLVQQPQVLQ GAARKKPLEY ---------- ENSTTRP00000006870/1-248 GVGWSSTAPG ----RCRRTS GLDRGSRCLQ KAGRRRTLIN CPSGWRCGWI ENSP00000362334/1-201 QKRFILNLPT FSVRIIDKNG IHDLDNISFP KQGS------ ---------- BACU009662/1-201 QKRFILNLPA FSVRIIDKNG IHDLDNISFP KQGS------ ---------- ENSBTAP00000003072/1-201 QKRFILNLPT FSVRIIDRNG IHDLDNISFP KQGS------ ---------- 251 300 bmy_08888T0/1-146 -- ENSTTRP00000006870/1-248 PQ ENSP00000362334/1-201 -- BACU009662/1-201 -- ENSBTAP00000003072/1-201 --