KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:19:56 2014  Check: 00 ..

 Name: ENSTTRP00000001457/1-350  Len:    350  Check:  7373  Weight:  1.00
 Name: ENSP00000339626/1-350     Len:    350  Check:  8283  Weight:  1.00
 Name: bmy_01597T0/1-349         Len:    350  Check:  9910  Weight:  1.00
 Name: ENSBTAP00000003082/1-350  Len:    350  Check:  9459  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000001457/1-350  MCRCPRERHD GRMTSAEAVA VAGGARWAGI PQWPPDTPQA LRRPGRAWVA 
ENSP00000339626/1-350     MCRCPPEHHD GRMTSAEVGA AAGGAQAAGP PEWPPGSPQA LRQPGRARVA 
bmy_01597T0/1-349         MCRCPRERHD GRMTSAEAVA VAGGARWP-S PQWPPDTPRA LRRPGRAWVA 
ENSBTAP00000003082/1-350  MCRCPPDHHD GRMTSAEAVE VAGGARWAGS AEWPPGTPQA LRRPGRARVA 


                          51                                                 100
ENSTTRP00000001457/1-350  VAALVWLLAG ASMSSLNKWI FTVHGFGRPL LLSALHMLAA ALACHPGARR 
ENSP00000339626/1-350     MAALVWLLAG ASMSSLNKWI FTVHGFGRPL LLSALHMLVA ALACHRGARR 
bmy_01597T0/1-349         VAALVWLLAG ASMSSLNKWI FTVHGFGRPL LLSALHMLAA ALACHPGARR 
ENSBTAP00000003082/1-350  VAALVWLLAG ASMSSLNKWI FTVHGFGRPL LLSALHMLAA ALACHRGARR 


                          101                                                150
ENSTTRP00000001457/1-350  PMPGRTRRQV LLLSLTLGAS MACGNVGLSA VPLDLAQLAT TTTPLITLAL 
ENSP00000339626/1-350     PMPGGTRCRV LLLSLTFGTS MACGNVGLRA VPLDLAQLVT TTTPLFTLAL 
bmy_01597T0/1-349         PMPGRTRRQV LLLSLTLGAS MACGNVGLSA VPLDLAQLAT TITPLITLAL 
ENSBTAP00000003082/1-350  PLPGQTRRQV LLLSLTFGAS MACGNVGLSA VPLDLAQLAT TTTPLITLAL 


                          151                                                200
ENSTTRP00000001457/1-350  SALLLGRRHH PLQFAAMGLL CLGAACSLAG ELRTPPAGCG FLLAATCLRG 
ENSP00000339626/1-350     SALLLGRRHH PLQLAAMGPL CLGAACSLAG EFRTPPTGCG FLLAATCLRG 
bmy_01597T0/1-349         SALLLGRRHH PLQFAAMGPL CLGAACSLAG ELRTPPAGCG FLLAATCLRG 
ENSBTAP00000003082/1-350  SALLLGRRHH PLQFAAMGPL CLGAACSLAG ELRTPPAGCG FLLAATCLRG 


                          201                                                250
ENSTTRP00000001457/1-350  LKSIQQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000339626/1-350     LKSVQQSALL QEERLDAVTL LYATSLPSFC LLAGAALVLE AGVAPPPTAG 
bmy_01597T0/1-349         LKSVQQSALL QEERLDAVTL LYATSLPSFC LLAGAALVLE AGVAPLPAPT 
ENSBTAP00000003082/1-350  LKSIQQSALL QEEQLDAVTL LYATSLPSFC LLAGAALVLE AGVAPPPVPT 


                          251                                                300
ENSTTRP00000001457/1-350  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000339626/1-350     DSRLWACILL SCLLSVLYNL ASFSLLALTS ALTVHVLGNL TVVGNLILSR 
bmy_01597T0/1-349         DSRLWACILL SCLLSVLYNL ASFSLLALTS ALTVHVLGNL TVVGNLVLSR 
ENSBTAP00000003082/1-350  DCHLWACVLL SCLLSVLYNL ASFSLLALTS ALTVHVLGNL TVVGNLVLSR 


                          301                                                350
ENSTTRP00000001457/1-350  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XRRDQPGKGL 
ENSP00000339626/1-350     LLFGSRLSAL SYVGIALTLS GMFLYHNCEF VASWAARRGL WRRDQPSKGL 
bmy_01597T0/1-349         LLFGSHLSTL SYVGIALTLS GMFLYHNCEF LASWAARRGF WRRDQPGKGL 
ENSBTAP00000003082/1-350  LLFGSRLSTL SYVGVALTLS GMFLYHNCEF VASWAARRGF RWRDQPGKGL