KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:56 2014 Check: 00 .. Name: ENSP00000378332/1-461 Len: 1297 Check: 471 Weight: 1.00 Name: ENSBTAP00000003094/1-456 Len: 1297 Check: 9520 Weight: 1.00 Name: ENSTTRP00000011856/1-456 Len: 1297 Check: 8663 Weight: 1.00 Name: bmy_00712T0/1-507 Len: 1297 Check: 3533 Weight: 1.00 Name: BACU011968/1-1192 Len: 1297 Check: 6496 Weight: 1.00 // 1 50 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 MAAAKLSPAD SLSFCLAQLT AAAGEGLGGG KDTAINETPL GRALLALRTR 51 100 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 HVKAAGGIER FRARGGLRPL LALLRRAAAA GPAPSQAGPG SAPSSVESAA 101 150 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 SSGPAPSLGP APSAASSSTP SPPARLRKTL DLALSVLANC CTEGECRAEV 151 200 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 RRLGGIIPLV TILQCVKTDS IQNRTARALG NLAMEPESCG DIHSAGAVPL 201 250 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 LVEGLTACQD SQCRQSVVRA LRNLADSPQH RLALAKQGAV RPLAELLAAA 251 300 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 PDPAMTLALV RALLELSRGC SRACAEQLSL GGGLGPLVSL ASHPKRAVRE 301 350 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 AAILILANLC AQGLVRPALG NAGGVEVLLG ELRRRRGPSG ASPASQQPLV 351 400 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 RAVCLLCREA INRARLRDAG GLELLMGLLR DPRASAWHPR VVAALVGFFY 401 450 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 DTGALGRLQA LGLVPLLAGQ LCGEAGDEEE EGREAASWDF PEERTPERAE 451 500 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 AGSFQSLRSW LISEGYAADP GDISPDWSPE RCPPPPEPVS EMLLQNLTVQ 501 550 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 AESPFGVGAL THLLLSGSPE DRVACALTLP FICRFSFLPE GSPLCGAGCF 551 600 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 CPRAXXXXXX XXXXXXXXLF FAADSLSCLQ GLVSPTVSPA LLPAIPLDLD 601 650 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 PPSPCLYEPL LGPAPTPAPD LHFLLDSGLR LPAQRAASAN ASPFFRALLA 651 700 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 GSFAEAHMDL VPLRGLSPSA AWPVLHHLHG CRGCGATLGP VPPPGQPLMG 701 750 ENSP00000378332/1-461 ---------- ---------- ---------- ------MEDL DALLSDLETT ENSBTAP00000003094/1-456 ---------- ---------- ---------- ------MEDL DALLSDLETT ENSTTRP00000011856/1-456 ---------- ---------- ---------- ------MEDL DALLSDLETT bmy_00712T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU011968/1-1192 SEAEEALEAA GRFLLPGLEE ELEEAVGRIH LGPQGGPESV DALLSDLETT 751 800 ENSP00000378332/1-461 TSHMPRSGAP KERPAEPLTP PPSYGHQPQT GSGESSGASG DKDHLYSTVC ENSBTAP00000003094/1-456 TSHMPRSGAL KERPPEPLTS PLT-----QM GPGESSGASG DKDHLYSTVC ENSTTRP00000011856/1-456 TSHMPRSGAL KERPPEPLTS PLT-----QM GSGESSGASG DKDHLYSTVC bmy_00712T0/1-507 ---MPRSGAL KERPPEPLTS PLT-----QM GSGESSGASG DKDHLYSTVC BACU011968/1-1192 TSHMPRSGAL KERPPEPLTS PLT-----QM GSGESSGASG DKDHLYSTVC 801 850 ENSP00000378332/1-461 KPRSPKPAAP AAPPFSSSSG VLGTGLCELD RLLQELNATQ FNITDEIMSQ ENSBTAP00000003094/1-456 KPRSPKPAAP ATPPFSSSCG VLGTGLCELD RLLQELNATQ FNITDEIMSQ ENSTTRP00000011856/1-456 KPRSPKPAAP AAPPFSSSCG VLGTGLCELD RLLQELNATQ FNITDEIMSQ bmy_00712T0/1-507 KPRSPKPAAP AAPPFSSSCG VLGTGLCELD RLLQELNATQ FNITDEIMSQ BACU011968/1-1192 KPRSPKPAAP AAPPFSSSCG VLGTGLCELD RLLQELNATQ FNITDEIMSQ 851 900 ENSP00000378332/1-461 FPSSKVASGE QKEDQSEDKK RPSLPSSPSP GLPKASATSA TLELDRLMAS ENSBTAP00000003094/1-456 FPSSKETAGE QKEDQSEDKK RPSPPPSPSP VLPKPSATSA TLELDRLMAS ENSTTRP00000011856/1-456 FPSSKETAGE QKEDQSEDKK RPSLPPSPSP VLPKPSATSA TLELDRLMAS bmy_00712T0/1-507 FPSSKETAGE QKEDQSEDKK RPSPPPSPSP VLPKPSATSA TLELDRLMAS BACU011968/1-1192 FPSSKETAGE QKEDQSEDKK RPSPPPSPSP VLPKPSATSA TLELDRLMAS 901 950 ENSP00000378332/1-461 LSDFRVQNHL PASGPTQPPV VSSTNEGSPS PPEPTGKGSL DTMLGLLQSD ENSBTAP00000003094/1-456 LSDFRVQNHL PASGPTPPPV PSSMSEDTPS PPGPTSKGSL DTMLGLLQSD ENSTTRP00000011856/1-456 LSDFRVQNHL PASGPTQPPV PSSVNEGSSS PPGPAGKGSL DTMLGLLQSD bmy_00712T0/1-507 LSDFRVQNHL PASGPTQPPV PSSVNEGSPS PPGPAGKGSL DTMLGLLQSD BACU011968/1-1192 LSDFRVQNHL PASGPTQPPV PSSVNEGSPS PPGPAGKGSL DTMLGLLQSD 951 1000 ENSP00000378332/1-461 LSRRGVPTQA KGLCGSCNKP IAGQVVTALG RAWHPEHFVC GGCSTALGGS ENSBTAP00000003094/1-456 LSRRGVPTQA KGLCGSCNKP IAGQVVTALG RAWHPEHFVC GGCSTALGGS ENSTTRP00000011856/1-456 LSRRGVPTQA KGLCGSCNKP IAGQVVTALG RAWHPEHFVC GGCSTALGGS bmy_00712T0/1-507 LSRRGVPTQA KGL------- ---------- ---------- -----SLGGS BACU011968/1-1192 LSRRGVPTQA KGLCGSCNKP IAGQVVTALG RAWHPEHFVC GGCSTALGGS 1001 1050 ENSP00000378332/1-461 SFFEKDGAPF CPECYFERFS PRCGFCNQPI RHKMVTALGT HWHPEHFCCV ENSBTAP00000003094/1-456 SFFEKDGAPF CPECYFERFS PRCGLCNQPI RHKMVTALGT HWHPEHFCCV ENSTTRP00000011856/1-456 SFFEKDGAPF CPECYFERFS PRCGLCNQPI RHKMVTALGT HWHPEHFCCV bmy_00712T0/1-507 SFFEKDGAPF CPECYFERFS PRCGLCNQPI RHKMVTALGT HWHPEHFCCV BACU011968/1-1192 SFFEKDGAPF CPECYFERFS PRCGLCNQPI RHKMVTALGT HWHPEHFCCV 1051 1100 ENSP00000378332/1-461 SCGEPFGDEG ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 SCGEPFGDEG ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 SCGEPFGDEG ---------- ---------- ---------- ---------- bmy_00712T0/1-507 SCGEPFGDEG ESLTPTLKAA GPLDIPPCSL WASALRPPKS SGPRIFSCSL BACU011968/1-1192 SCGEPFGDEG ---------- ---------- ---------- ---------- 1101 1150 ENSP00000378332/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003094/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011856/1-456 ---------- ---------- ---------- ---------- ---------- bmy_00712T0/1-507 LAPTCPTCVF PSHPFPLCPR PRPNPSPPTA SPGPIASDLV GLLVPPRTLF BACU011968/1-1192 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000378332/1-461 ---------- FHEREGRPYC RRDFLQLFAP RCQGCQGPIL DNYISALSAL ENSBTAP00000003094/1-456 ---------- FHEREGRPYC RRDFLQLFAP RCQGCQGPIL DNYISALSAL ENSTTRP00000011856/1-456 ---------- FHEREGRPYC RRDFLQLFAP RCQGCQGPIL DNYISALSAL bmy_00712T0/1-507 LPATRFPLLG FHEREGRPYC RRDFLQLFAP RCQGCQGPIL DNYISALSAL BACU011968/1-1192 ---------- FHEREGRPYC RRDFLQLFAP RCQGCQGPIL DNYISALSAL 1201 1250 ENSP00000378332/1-461 WHPDCFVCRE CFAPFSGGSF FEHEGRPLCE NHFHARRGSL CATCGLPVTG ENSBTAP00000003094/1-456 WHPDCFVCRE CFAPFSGGSF FEHEGRPLCE NHFHARRGSL CATCGLPVTG ENSTTRP00000011856/1-456 WHPDCFVCRE CFAPFSGGSF FEHEGRPLCE NHFHARRGSL CATCGLPVTG bmy_00712T0/1-507 WHPDCFVCRE CFAPFSGGSF FEHEGRPLCE NHFHARRGSL CATCGLPVTG BACU011968/1-1192 WHPDCFVCRE CFAPFSGGSF FEHEGRPLCE NHFHARRGSL CATCGLPVTG 1251 1300 ENSP00000378332/1-461 RCVSALGRRF HPDHFTCTFC LRPLTKGSFQ ERAGKPYCQP CFLKLFG ENSBTAP00000003094/1-456 RCVSALGRRF HPDHFTCTFC LRPLTKGSFQ ERAGKPYCQP CFLKLFG ENSTTRP00000011856/1-456 RCVSALGRRF HPDHFTCTFC LRPLTKGSFQ ERAGKPYCQP CFLKLFG bmy_00712T0/1-507 RCVSALGRRF HPDHFTCTFC LRPLTKGSFQ ERAGKPYCQP CFLKLFG BACU011968/1-1192 RCVSALGRRF HPDHFTCTFC LRPLTKGSFQ ERAGKPYCQP CFLKLFG