KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:19:58 2014 Check: 00 .. Name: ENSP00000385741/1-200 Len: 422 Check: 2833 Weight: 1.00 Name: ENSBTAP00000003115/1-385 Len: 422 Check: 6467 Weight: 1.00 Name: bmy_00966T0/1-377 Len: 422 Check: 2763 Weight: 1.00 Name: ENSTTRP00000001189/1-178 Len: 422 Check: 830 Weight: 1.00 // 1 50 ENSP00000385741/1-200 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003115/1-385 MQP------- -----AYRGY SQMPWTRDSS EHMARLDPET FYFQFCNLLY bmy_00966T0/1-377 MEPQRPRQRA GLGLASKGGC SQRPRIRNPV EW---LDRQT FSFHFRNLSF ENSTTRP00000001189/1-178 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000385741/1-200 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003115/1-385 ANRRNCSYIC YKVERRKYHS RASFDWGVFH NQVYGGTRCH TELRFLSWFH bmy_00966T0/1-377 ANGRNCSYLC Y--------- ---------- -QVYPETPCH AELCFLSWFC ENSTTRP00000001189/1-178 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000385741/1-200 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003115/1-385 AEKLRPNERY HITWFMSWSP CMKCAKEVAD FLGRHQNVTL SIFTARLYNF bmy_00966T0/1-377 AKKLSPYEQY DITWFLSWSP CLSCAEQVAA FLKENRNVRL SIFAARLYYF ENSTTRP00000001189/1-178 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000385741/1-200 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003115/1-385 QEEGSRQGLL RLSDQGAHVD IMSYQEFKYC WKKFVNSQRR PFRPWKKLYR bmy_00966T0/1-377 WKPECQHGLR LLHHQRAWVR IMSIREFKYC WKNFVYBQGM PFKPWKKLRK ENSTTRP00000001189/1-178 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000385741/1-200 ---------- ------MALL TAETFRLQFN NKRRLRRPYY PRKALLCYQL ENSBTAP00000003115/1-385 NYQRLVEELE DILGNTMNLL REVLFKQQFG NQPRVPAPYY RRKTYLCYQL bmy_00966T0/1-377 NYQFLAAKLQ EILGNTMNLL KKKVFQQQFG NQHWVPLPRY RRKTYLCYQL ENSTTRP00000001189/1-178 ---------- ------MNLL KTNIFRQQFG NQPRVPQPCY RRKTYLCYQL 251 300 ENSP00000385741/1-200 TPQNGSTPTR GYFENK---- --KKCHAEIC FINEIKSMGL DETQCYQVTC ENSBTAP00000003115/1-385 KQRNDLTLDR GCFRNK---- --KQRHAEIR FIDKINSLDL NPSQSYKIIC bmy_00966T0/1-377 KQLDGFTLDK GCFRNKVPNP LQKQRHAEIR FIDKITSLNL DPNQSYKIIC ENSTTRP00000001189/1-178 KQLDGFTLDK GCFQNK---- --KQRHAEIR FIDKITSLNL DPNQRYKIIC 301 350 ENSP00000385741/1-200 YLTWSPCSSC AWELVDFIKA HDHLNLGIFA SRLYYHWCKP QQKGLRLLCG ENSBTAP00000003115/1-385 YITWSPCPNC ANELVNFITR NNHLKLEIFA SRLYFHWIKS FKMGLQDLQN bmy_00966T0/1-377 YVTWSPCPTC ARELVDFING QDHLSLQIFA SRLYFHWVKL FQRGLQQLQA ENSTTRP00000001189/1-178 YVTWSPCPAC AGELVDFING QDNLSLQIFA SRLYFHWIKV FQRGLQQLQA 351 400 ENSP00000385741/1-200 SQVPVEVMGF PKFADCWENF VDHEKPLSFN PYKMLEELDK NSRAIKRRLE ENSBTAP00000003115/1-385 AGISVAVMTH TEFEDCWEQF VDNQS----R PFQPWDKLEQ YSASIRRRLQ bmy_00966T0/1-377 AQVSVAVMTR SEFEDCWEEF VDNQG----M PFESWDKLEQ YSESISRRLQ ENSTTRP00000001189/1-178 AQVSVAVMTR SEFEDCWEEF VDNQG----M PFESWDKLEQ YSESISRRLQ 401 450 ENSP00000385741/1-200 RIKIPGVRAQ GRYMDILCDA EV ENSBTAP00000003115/1-385 RILTAPI--- ---------- -- bmy_00966T0/1-377 KILL------ ---------- -- ENSTTRP00000001189/1-178 RILS------ ---------- --