KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:00 2014 Check: 00 .. Name: BACU003884/1-334 Len: 423 Check: 2115 Weight: 1.00 Name: ENSP00000357069/1-423 Len: 423 Check: 1524 Weight: 1.00 Name: ENSBTAP00000003140/1-423 Len: 423 Check: 1025 Weight: 1.00 Name: bmy_06306T0/1-423 Len: 423 Check: 916 Weight: 1.00 Name: ENSTTRP00000001714/1-423 Len: 423 Check: 4321 Weight: 1.00 // 1 50 BACU003884/1-334 MSPTRHWGEW FLNLWVPPAG VFGVALLARV ALVFYGLFQD RTLLVRYTDI ENSP00000357069/1-423 MGSTKHWGEW LLNLKVAPAG VFGVAFLARV ALVFYGVFQD RTLHVRYTDI ENSBTAP00000003140/1-423 MSPTTHWGDK FLNLRVPPAG VFVVAFFARV ALIFYGIFQD RTLLVRYTDI bmy_06306T0/1-423 MSPTTHWGEW FLNLWVPPAG VFGVAFLARV ALVFYGLFQD RTLLVRYTDI ENSTTRP00000001714/1-423 MSPTTPSGEW FLNLWVSPAG VFGVAFLARV ALVFYGLFQD RTLLVRYTDI 51 100 BACU003884/1-334 DYQVFTDAAR FVTEGRSPYL RATYRYTPLL GWLLTPNIYV SELFGKFLFV ENSP00000357069/1-423 DYQVFTDAAR FVTEGRSPYL RATYRYTPLL GWLLTPNIYL SELFGKFLFI ENSBTAP00000003140/1-423 DYQVFTDAAR FVTEGRSPYL RATYRYTPLL AWLLTPNIYL NELFGKFLFI bmy_06306T0/1-423 DYQVFTDAAR FVTEGRSPYL RATYRYTPLL GWLLTPNIYL NELFGKFLFI ENSTTRP00000001714/1-423 DYQVFTDAAR FVTEGRSPYL RATYRYTPLL GWFLTPNIYL NELFGKFLFV 101 150 BACU003884/1-334 SFDLLTAFLL YRLLLLKGLG RRQACGYCVF WLLNPLPMAV SSRGNADSIV ENSP00000357069/1-423 SCDLLTAFLL YRLLLLKGLG RRQACGYCVF WLLNPLPMAV SSRGNADSIV ENSBTAP00000003140/1-423 SFDLFTAFLL YRLLLLKGLG RRQACGYCVF WLLNPLPMAV SSRGNADSIV bmy_06306T0/1-423 SFDLLTAFIL YRLLLLKGLG RRQACGYCVF WLLNPLPMAV SSRGNADSIV ENSTTRP00000001714/1-423 SFDLLTAYLV YRLLLLKGLG RRQACGYCVF WLLNPLPMAV SSRGNADSIV 151 200 BACU003884/1-334 SSLVLMTLYL IEKRLVACAA VFYGFAVHLK MYPVTYILPI ALHLLPERDS ENSP00000357069/1-423 ASLVLMVLYL IKKRLVACAA VFYGFAVHMK IYPVTYILPI TLHLLPDRDN ENSBTAP00000003140/1-423 ASLVLMTLYL IEKRLVACAA VSYGFAVHLK MYPVTYILPI ALHLLPERDS bmy_06306T0/1-423 SSLVLMTLYL IEKRLVACAA IFYGFAVHLK MYPVTYILPI ALHLLPERDS ENSTTRP00000001714/1-423 SSLVLMTLYL IEKRLVACAA VFYGFAVHLK MYPVTYILPI ALHLLPERDS 201 250 BACU003884/1-334 DEGLRQSRYS FQARLYEFLK RLCNRAVLLF VAVAGLTFFA LSFGFYYKYG ENSP00000357069/1-423 DKSLRQFRYT FQACLYELLK RLCNRAVLLF VAVAGLTFFA LSFGFYYEYG ENSBTAP00000003140/1-423 DEGLRQSRYS FQVRLYEFLK RLCHRAVLLF VAVAGLTFFA LSFGFYYRYG bmy_06306T0/1-423 DEGLRQFRYS FQARLYEFLK RLCNRAVLLF VAVAGLTFFA LSFSFYYKYG ENSTTRP00000001714/1-423 DEGLRQSRYS SQARLYEFMK RLCNRAVLLF VAVAGLTFFA LSFGFYYKYG 251 300 BACU003884/1-334 WEFLEHTYLY HLTRRDIRHN FSPYFYMLYL TAESKWSFPL GIAAXXVSPW ENSP00000357069/1-423 WEFLEHTYFY HLTRRDIRHN FSPYFYMLYL TAESKWSFSL GIAAFLPQLI ENSBTAP00000003140/1-423 WEFLEHAYLY HLTRRDIRHN FSPYFYMLYL TAESKWSFSL GIAAFLPQFI bmy_06306T0/1-423 WEFLEHTYLY HLTRRDIRHN FSPYFYMLYL TAESKWSFSL GIAAFLPQFI ENSTTRP00000001714/1-423 WEFLEHTYLY HLTRRDIRHN FSPYFYMLYL TAESKWSFFL GIAAFLPQFI 301 350 BACU003884/1-334 ---------- -ELPHPC--- ------HNSS CFQQCLLLIT ETLPFVVSFI ENSP00000357069/1-423 LLSAVSFAYY RDLVFCCFLH TSIFVTFNKV CTSQYFLWYL CLLPLVMPLV ENSBTAP00000003140/1-423 LLSAVSFAYY RDLVFCCFLH TSIFVTFNKV CTSQYFLWYL CLLPLVMPLV bmy_06306T0/1-423 LLSAVSFAYY RDLAFCCFLH TSIFVTFNKV CTSQYFLWYL CLLPLVMPLV ENSTTRP00000001714/1-423 LLSAVSFAYY RDLAFCCFLH TSIFVTFNKV CTSQYFLWYL CLLPLVMPLV 351 400 BACU003884/1-334 RL-------- ---------- ---------- ---------- -----FL--- ENSP00000357069/1-423 RMPWKRAVVL LMLWFIGQAM WLAPAYVLEF QGKNTFLFIW LAGLFFLLIN ENSBTAP00000003140/1-423 RIPWRRAVVL LMLWFIGQAL WLAPAYVLEF QGKNTFLFIW LAGLFFLLIN bmy_06306T0/1-423 RMPWRRAVVL LTLWFIGQAL WLAPAYVLEF QGKNTFLFIW LAGLFFLLIN ENSTTRP00000001714/1-423 RMPWRRAVVL LMLWFIGQAL WLAPAYVLEF QGKNTFLFIW LAGLFFLLIN 401 450 BACU003884/1-334 ---------- ---------- --- ENSP00000357069/1-423 CSILIQIISH YKEEPLTERI KYD ENSBTAP00000003140/1-423 CSILIQIISH YKEEPLTDRT KYD bmy_06306T0/1-423 CSILIQIISH YKEEPLTDRT KYD ENSTTRP00000001714/1-423 CFILIQIISH YEEEPLTDRT KYD