KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:09 2014 Check: 00 .. Name: ENSP00000343885/1-334 Len: 368 Check: 6357 Weight: 1.00 Name: BACU014379/1-358 Len: 368 Check: 3929 Weight: 1.00 Name: bmy_16407T0/1-241 Len: 368 Check: 9750 Weight: 1.00 Name: ENSTTRP00000002944/1-295 Len: 368 Check: 37 Weight: 1.00 Name: ENSBTAP00000003165/1-327 Len: 368 Check: 2600 Weight: 1.00 // 1 50 ENSP00000343885/1-334 MSALLRLLRT --------GA PAAACLRLGT SAGTGSRRAM ALYHTEERGQ BACU014379/1-358 MALDGPEQLE LEEGKAGSGL CQYYLSKIEE LQLIVNDKSQ NLWRLQAQRN bmy_16407T0/1-241 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002944/1-295 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003165/1-327 MRALLPLLRT SWAWPVGAAA AASARLLRGA SAGPGPRRTM ALYRTEERGQ 51 100 ENSP00000343885/1-334 PCSQNYRLFF KNV------- --TGHYISPF HDIPLKVNSK EE-------- BACU014379/1-358 EINAKVRLLR EELQLLQGKG SSVGEVVRTM DKKKVLVKVH PEGKFVVEVD bmy_16407T0/1-241 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002944/1-295 ---------- -NV------- --AGHYISPF HDIPLKADSE EDTGAEGVID ENSBTAP00000003165/1-327 PHSPDYRLFF KNV------- --AGHYISPF HDIPLKVDSE ---------- 101 150 ENSP00000343885/1-334 ------NGIP MKKA--RNDE YENLFNMIVE IPRWTNAKME IATKEPMNPI BACU014379/1-358 KNIDINDVTP NCRVALRNDS YTLHKILPNK VDPLVSLMM- IATKEPLNPI bmy_16407T0/1-241 ---------- ---------- ------MVVE VPPWTNAKME IATEESLNPI ENSTTRP00000002944/1-295 LSKVWENGIP TKRA--RNDE YENLFNMVVE VPRWTNAKME IATEEPLNPI ENSBTAP00000003165/1-327 ---------- ---------- -ENVFNMVVE VPRWTNAKME IATKEPLNPI 151 200 ENSP00000343885/1-334 KQYVKDGKLR YVANIFPYKG YIWNYGTLPQ TWEDPHEKDK STNCFGDNDP BACU014379/1-358 KQDVKDGKLR YVANIFPHKG YIWNYGALPQ TWEDPHRKDK STDCCGDNDP bmy_16407T0/1-241 KQDVKDGKLP YVANIFPHKG YIWNYGALPQ TWEEPHRKDK STDCCGDNNP ENSTTRP00000002944/1-295 KQDVKDGKLR YVANIFPHKG YIWNYGALPQ TWEDPHRKDK STDCCGDNDP ENSBTAP00000003165/1-327 KQDVKDGKLR YVANIFPHKG YIWNYGALPQ TWEDPHRKDK STDCCGDNDP 201 250 ENSP00000343885/1-334 IDVCEIGSKI LSCGEVIHVK ILGILALIDE GETDWKLIAI NANDPEASKF BACU014379/1-358 IDVCEIGSKV LSRGDVVHVK ILGILALIDQ GETDWKLIAI NVNDPEASKF bmy_16407T0/1-241 IDVCEIGSKV LSRGDVVHVK IPGILALIDQ GETDWKLIAI NVNDPEASKF ENSTTRP00000002944/1-295 IDVCEIGSKV LSRGDVVHVK ILGILALIDQ GETDWKLIAI NVNDPEASKF ENSBTAP00000003165/1-327 IDVCEIGSKV LSRGEVVHVK ILGVLALIDQ GETDWKLIAI NVNDPEASKF 251 300 ENSP00000343885/1-334 HD-IDDVKKF KPGYLEATLN WFRLYKVPDG KPENQFAFNG EFKNKAFALE BACU014379/1-358 HDNIEDVKKY KPGYLEATLN WFRFYKIPEG KPENQFAFNG EFKNKAFALE bmy_16407T0/1-241 HD-IEDVKKY KPGYLEATLN WFRFYKIPEG KLENQFAFNG EFKNKAFALK ENSTTRP00000002944/1-295 HD-IEDVKKY KPGYLEATLN WFRFYKIPEG KPENQFAFNG EFKNKAFALE ENSBTAP00000003165/1-327 HD-IEDVKKY KPGYLEATLN WFRFYKIPEG KPENQFAFNG EFKNKAFALE 301 350 ENSP00000343885/1-334 VIKSTHQCWK ALLMKKCNGG AINCTNVQIS DSPFRCTQEE ARSLVESVSS BACU014379/1-358 VIKSTHECWK ALLMEKCAGG AINCTNVQVC DSPFHCSQEE ARSLVESVRD bmy_16407T0/1-241 VIKSTHECCK ALLMEKCDGG AINWTNVQVC DSPFHCSQEE XRSLVESVSF ENSTTRP00000002944/1-295 VIKSTHECWK ALLMEKCAGG AINCTNVQVC DSPFHCSQEE ARSLVESVSF ENSBTAP00000003165/1-327 VIKSAHECWR ALLMDKCDGG AINCTNVQVC DSPFHCSQEE ARSLVESVSF 351 400 ENSP00000343885/1-334 SPNKESNEEE QVWHFLGK BACU014379/1-358 KCPRH----- --PLFL-- bmy_16407T0/1-241 SLNKGSNEED QVWHFLGK ENSTTRP00000002944/1-295 SLNKGSNEED QVWHFLGK ENSBTAP00000003165/1-327 SLNKGSNEED QVWHFLGK