KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:14 2014 Check: 00 .. Name: BACU000277/1-139 Len: 625 Check: 7475 Weight: 1.00 Name: ENSTTRP00000009690/1-615 Len: 625 Check: 1531 Weight: 1.00 Name: ENSP00000406144/1-581 Len: 625 Check: 4264 Weight: 1.00 Name: ENSBTAP00000003183/1-571 Len: 625 Check: 8469 Weight: 1.00 Name: bmy_00869T0/1-450 Len: 625 Check: 7469 Weight: 1.00 // 1 50 BACU000277/1-139 ---------- ---------- ---------- --------MT ALDLFLTNQF ENSTTRP00000009690/1-615 ---------- MGRKGHKDSF YPCERTPVSS LHESLDQCMT ALDLFLTNQF ENSP00000406144/1-581 MAFLTTWKEA ASGKSDR--- ----RTPESS LHEALDQCMT ALDLFLTNQF ENSBTAP00000003183/1-571 ---------- MGQKGHG--- ----RTPVSS LHEALDQCMT ALDLFLTNQF bmy_00869T0/1-450 ---------- ---------- ---------- --------MT ALDLFLTNQF 51 100 BACU000277/1-139 SEALSYLKPR TKESMYHSLT YATILEMQAM MTFDPQDILL AGNMLKEAQS ENSTTRP00000009690/1-615 SEALSYLKPR TKESMYHSLT YATILEMQAM MTFDPQDILL AGNMLKEAQS ENSP00000406144/1-581 SEALSYLKPR TKESMYHSLT YATILEMQAM MTFDPQDILL AGNMMKEAQM ENSBTAP00000003183/1-571 SEALNYLKPR TKESMYHSLT YATILEMQAM MTFDPQDILL AGNMMKEAQS bmy_00869T0/1-450 SEALSYLKPR TKESMYHSLT YATILEMQAM MTFDPQDILL AGNMLKEAQS 101 150 BACU000277/1-139 LCQRHRRKSS VTDSFSNLLH RPAMDQFTEV EIHAEVCYAE CLLQRAALTF ENSTTRP00000009690/1-615 LCQRHRRKSS VTNXXXXXXX XXXXXXXXXX EIHAEVCYAE CLLQRAALTF ENSP00000406144/1-581 LCQRHRRKSS VTDSFSSLVN RPTLGQFTEE EIHAEVCYAE CLLQRAALTF ENSBTAP00000003183/1-571 LCQRHRKKSS VTDSFSSLVH RPTMDQFTEE EIHAEVCYAE CLLQRAALTF bmy_00869T0/1-450 LCQRSR--PG VWTGMRGL-- ---------- EIHAEVCYAE CLLQRAALTF 151 200 BACU000277/1-139 ---------- ---------- ---------- -------LQD ENMVSFIKGG ENSTTRP00000009690/1-615 LQGPSSWAQG GPGRSRALYD PSQACGYPPR PGSHLSPLQD EXXXXXXXXX ENSP00000406144/1-581 ---------- ---------- ---------- -------LQD ENMVSFIKGG ENSBTAP00000003183/1-571 ---------- ---------- ---------- -------LQD ENMVSFIKGG bmy_00869T0/1-450 ---------- ---------- ---------- -------LQD ENMVSFIKGG 201 250 BACU000277/1-139 IKVRNSYQTY N--------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 XXXXXXXXXY KELDSLVQSS QYCKGENHRH FEGGVKLGVG AFNLTLSMLP ENSP00000406144/1-581 IKVRNSYQTY KELDSLVQSS QYCKGENHPH FEGGVKLGVG AFNLTLSMLP ENSBTAP00000003183/1-571 LKVRNSYQTY KELDSLVQSS QYCKGENHRH FEGGVKLGVG AFNLTLSMLP bmy_00869T0/1-450 IKVRNSYQTY KELDSLVQSS QYCQGENHRH FEGGVKLGVG AFNL------ 251 300 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 TRILRLLEFV GFSGNKDYGL LQLEEGASGH SFRAVLCVML LLCYHTFLTF ENSP00000406144/1-581 TRILRLLEFV GFSGNKDYGL LQLEEGASGH SFRSVLCVML LLCYHTFLTF ENSBTAP00000003183/1-571 TRILRLLEFV GFSGNKDYGL LQLEEGASGH SFRAVLCVML LLCYHTFLTF bmy_00869T0/1-450 ---------- ------DYGL LQLEEGASGH SFRAVLCVML LLCYHTFLTF 301 350 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 VLGTGNVNIA EAEKLLRPYL KRYPKGAIFL FFAGRIEAIK GNVDAAIRRF ENSP00000406144/1-581 VLGTGNVNIE EAEKLLKPYL NRYPKGAIFL FFAGRIEVIK GNIDAAIRRF ENSBTAP00000003183/1-571 VLGTGNVNIE EAEKLLRPYL KRYPKGAIFL FFAGRIEVIK GNVDAAIQRF bmy_00869T0/1-450 VLGTGNVNIA EAEKLLRPYL KRYPKGAIFL FFAGRIEAIK GNVDAAIRRF 351 400 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 EECCEAQQHW KQFHHMCYWE LMWCFTYKGQ WKMAYFYADL LSKENSWSKA ENSP00000406144/1-581 EECCEAQQHW KQFHHMCYWE LMWCFTYKGQ WKMSYFYADL LSKENCWSKA ENSBTAP00000003183/1-571 EECCEAQQHW KQFHHMCYWE LMWCFTYKAQ WKMAYFYADL LSKENSWSKA bmy_00869T0/1-450 EECCEAQQHW KQFHHMCYWE LMWCFTYKGQ WKMAYFYADL LSKENSWSKA 401 450 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 TYIYMKAAYL SMFGKEDYKP FGDDEVELFR AVPGLKLKIA GKSLPTEKFA ENSP00000406144/1-581 TYIYMKAAYL SMFGKEDHKP FGDDEVELFR AVPGLKLKIA GKSLPTEKFA ENSBTAP00000003183/1-571 TYIYMKAAYL SMFGKEEYKP FGDDEVELFR AVPGLKLKIA GKSLPTEKFA bmy_00869T0/1-450 TYIYMKAAYL SMFGKEDYKP FGDDEVELFR AVPGLKLKIA GKSLPTEKFA 451 500 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 IRKSRRYLSS KPISLPIPAL EMMYIWNGYA VIGKQSGLTD AILESITDTE ENSP00000406144/1-581 IRKSRRYFSS NPISLPVPAL EMMYIWNGYA VIGKQPKLTD GILEIITKAE ENSBTAP00000003183/1-571 IRKSRRYLSP KPISLPVPAL EMMYIWNGYA VIGKQPELTD GILEIIIKAE bmy_00869T0/1-450 IRKSRRYLSP KPISLPIPAL ---------- ---------- ---------- 501 550 BACU000277/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009690/1-615 ELLEKGLENE YSVDDECLVK LLKGLCLKYL GRVQEAEENF RSISANEKRI ENSP00000406144/1-581 EMLEKGPENE YSVDDECLVK LLKGLCLKYL GRVQEAEENF RSISANEKKI ENSBTAP00000003183/1-571 EMLEKGPENE YSVDDECLVK LLKGLCLKYL GRVQEAEENF RIISANEKRI bmy_00869T0/1-450 ---------- ---------- ---------- ----EAEENF RSISANEKRI 551 600 BACU000277/1-139 ---------- ---------T QG-------- ---------- ---------- ENSTTRP00000009690/1-615 KYDHYLIPNA LLELALLFME QGRNEEAVKL LETAKQNYKN YSMESRTHFR ENSP00000406144/1-581 KYDHYLIPNA LLELALLLME QDRNEEAIKL LESAKQNYKN YSMESRTHFR ENSBTAP00000003183/1-571 KYDHYLIPNA LLELALLFME QGRNEEAVKL LETAKQNYKN YSMESRTHFR bmy_00869T0/1-450 KYDHYLIPNA LLELALLFME QGRNEEAVKL LETAKQNYKN YSMESRTHFR 601 650 BACU000277/1-139 ---------- ---------- ----- ENSTTRP00000009690/1-615 IQAATLQAKS SLENGNRSMV SSMPL ENSP00000406144/1-581 IQAATLQAKS SLENSSRSMV SSVSL ENSBTAP00000003183/1-571 IQAATLQAKS SLEKGNRSMV SSVSL bmy_00869T0/1-450 IQAATLQAKS SLENGNRSMV SSMPL