KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:14 2014 Check: 00 .. Name: ENSP00000380877/1-757 Len: 902 Check: 624 Weight: 1.00 Name: ENSTTRP00000006418/1-752 Len: 902 Check: 2940 Weight: 1.00 Name: ENSBTAP00000003186/1-747 Len: 902 Check: 9336 Weight: 1.00 Name: bmy_00965T0/1-731 Len: 902 Check: 3419 Weight: 1.00 Name: BACU013374/1-831 Len: 902 Check: 7022 Weight: 1.00 // 1 50 ENSP00000380877/1-757 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006418/1-752 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003186/1-747 ---------- ---------- ---------- ---------- ---------- bmy_00965T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU013374/1-831 MELDPSVQQD PRYCKGSKEL LPKNVNHSWI ERVFGKCGNV VYISIPHYKS 51 100 ENSP00000380877/1-757 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006418/1-752 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003186/1-747 ---------- ---------- ---------- ---------- ---------- bmy_00965T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU013374/1-831 TGDPKGFAFV EFETKEQAAK AIEFLNNPPE EAPRKPGIFP KTVKNKPIPA 101 150 ENSP00000380877/1-757 ---------- ---------- ---------- ---------- -----MPALP ENSTTRP00000006418/1-752 ---------- ---------- ---------- ---------- -----MPALP ENSBTAP00000003186/1-747 ---------- ---------- ---------- ---------- -----MPALP bmy_00965T0/1-731 ---------- ---------- ---------- ----MQHNAS SAPGPTPDHP BACU013374/1-831 LRVAVPALWE LSPWTAAAAA AAVQRRQWSR RGGSMQHNAS SAPGPTPDHP 151 200 ENSP00000380877/1-757 LDQLQITHKD PKTGKLRTSP ALHPEQKADR YFVLYKPPPK DNIPALVEEY ENSTTRP00000006418/1-752 LDQLQITHKD LKTGKLRTSP ALHPEQKADR YFVLYKPPPK DNIPALVEEY ENSBTAP00000003186/1-747 LDRLQVTHED LKTGKLRTSP ALHPEQKADR YFVLYKPPPK DNIPALVEEY bmy_00965T0/1-731 QGPEDREAED FTSADL---- -----EVGGL WLT-----TA ETQPGLLP-- BACU013374/1-831 QGPEDREAED FTSADL---- -----EKTDR YFALYKPPPK DNIPALVEEY 201 250 ENSP00000380877/1-757 LERATFVAND LDWLLALPHD KFWCQVIFDE TLQKCLDSYL RYVPRKFDEG ENSTTRP00000006418/1-752 LERATFVAND LDWLLALPHD KFWCQXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000003186/1-747 LERATFVAND LDWLLALPHD KFWCQVIFDE TLQKCLDSYL RYVPRKFDEW bmy_00965T0/1-731 LERTTFVAND LDWLLALPHD KFWCQVVFDE TLQKCLDSYL HFVSRKFDQW BACU013374/1-831 LERATFVAND LDWLLALPHD KFWCQVVFDE TLQKCLDSYL HYVLRNFDQW 251 300 ENSP00000380877/1-757 VASAPEVVDM QKRLHRSVFL TFLRMSTHKE SKDHFISPSA FGEILYNNFL ENSTTRP00000006418/1-752 VAPAHEVDDM EKRLNRSVFL TFLRMSTHKE SKDHFISPSA FGEILYNNFL ENSBTAP00000003186/1-747 VAPAPEVVDM QRRLHRSVFL TFLRMSTHKE SKDHFISPSA FGEILYNNFL bmy_00965T0/1-731 AAPAPEVIDM EKCLHRSVFL AFLRMSTHKE SKDHFISPSA FGEILYNNFQ BACU013374/1-831 VAPAPEVIDM EKCLHQSVFL AFLRMSAHKE SKDHFISPSA FGEILYNNFQ 301 350 ENSP00000380877/1-757 FDIPKILDLC VLFGKGNSPL LQKMIGNIFT QQPSYYSDLD ETLPTILQVF ENSTTRP00000006418/1-752 FDIPKILDLC VLFGKGNSPL LQKMIGNIFL QQPSYYNDLD ETMPTILQVF ENSBTAP00000003186/1-747 FDIPKILDLC VLFGKGNSPL LQKMIGNIFI QQPSYYNDLD ETMPTILQVF bmy_00965T0/1-731 FDIPKILDLC VLFGKGNSPL LQKMIGNIFT QQPSYYNDLD ETMPTILQVF BACU013374/1-831 FDIPKILDLC VLFGKGDSPL LQKMIGNIFI QEPSYYNDLG ETMPTILQVF 351 400 ENSP00000380877/1-757 SNILQHCGLQ GDGANTTPQK LEERGRLTPS DMPLLELKDI VLYLCDTCTT ENSTTRP00000006418/1-752 SNILQHCGLQ GDGACTTPQK LEERGRLTPS DMPLLELKDI VLYLCDTCTT ENSBTAP00000003186/1-747 SNILQHCGLR GDGASATPQK LEERGRLTPS DMPLPELKDV VLYLCDTCTT bmy_00965T0/1-731 SNILQHCGLQ GDGACATPQK LEERARLTPS DMPLLELKDI VLYLCDTCTT BACU013374/1-831 SNILQHCGLQ GDGACAKPQK LEERARLTPS DMPLLELKDI VLYLCDTCTT 401 450 ENSP00000380877/1-757 LWAFLDIFPL ACQTFQKHDF CYRLASFYEA AIPEMESAIK KRRLEDSKLL ENSTTRP00000006418/1-752 LWAFLDIFPL ACPTFQKHDF CYRLASFYEI AISELESAIK KRRLEDSKLL ENSBTAP00000003186/1-747 LWAFLDIFPL ACPTFQKHDF CYRLASFYEI AVPELESAIK KRRLEDSKLL bmy_00965T0/1-731 LWAFPDIFPL ACPTFQKHDF CYRLASFYEI AIPELESAIK KRRLEDSKLL BACU013374/1-831 LWAFPDIFPL ACPTFQKHNF CYRLASFYEI AIPKLESAIK KRRLEDSKLL 451 500 ENSP00000380877/1-757 GDLWQRLSHS RKKLMEIFHI ILNQICLLPI LESSCDNIQG FIEEFLQIFS ENSTTRP00000006418/1-752 GDLWQRLSHS RKKLLEIFHI LLNQICLLPV LESSCDNIQG FIEEFLQIFS ENSBTAP00000003186/1-747 GDLWQRLSHS KKKLLEILHI LLNQTCLLPV LENSCDNIQG FIEDFLQIFS bmy_00965T0/1-731 GDLWQRLSHS RKKLLEIFHI LLNQICLLPV LESSCDNIQG FVEEFLQIFS BACU013374/1-831 GDLWQRLSHS RKKLLEIFHI LLNQICLLPV LESSCDNIQS FVEAFLQIFG 501 550 ENSP00000380877/1-757 SLLQEKRFLR DYDALFPVAE DISLLQQASS VLDETRTAYI LQAVESAWEG ENSTTRP00000006418/1-752 SLLQEKRFLR DYDALFPVAD DISLLQQASS ALDETRTAYI LQAVESAWEG ENSBTAP00000003186/1-747 SLLQEKRFLR DYDSLFPVAD DVSLLEQASS ALDETRTAYI LQAVESAWEG bmy_00965T0/1-731 SLLQEKRSLR NYDVLFPVAD DVSLLQQASS ALDETRTAYI LQAVESAWEG BACU013374/1-831 SSLQEKRSLR NYDVLFPVAD DVSLLQQASS ALDETRTAYV LQAVESAWEG 551 600 ENSP00000380877/1-757 VDRRKATDAK DPSVIEEPNG EPNGVTVTAE AVSQASSHPE NSEEEECMGA ENSTTRP00000006418/1-752 VDRRKATNAK DPPVAEN--- -PNGVVVVAE AVSRPSSLPQ NSEEEECLGA ENSBTAP00000003186/1-747 VDRKKATRAR DSATAEN--- -PNGVGAEAE VLSGPSSLPQ ---EEKCLGA bmy_00965T0/1-731 VDRRKATDAK DPPVAEH--- -PNGVMEVAE AVSRPSSLPQ NSEEEECLGA BACU013374/1-831 VDRRKATDAK DPPVAEH--- -PNGVMEAAE AVSRPSSLRQ NSEEEECLGA 601 650 ENSP00000380877/1-757 AAAVGPAMCG VELDSLISQV KDLLPDLGEG FILACLEYYH YDPEQVINNI ENSTTRP00000006418/1-752 AAAPGPTVCG VELDSLISQV KDLLPDLGEG FILACLEHYS YDPEQVINNI ENSBTAP00000003186/1-747 AAAPGPTVCG VELDSLISQV KDLLPDLGEG FILACLEHYS YEPEQVINNI bmy_00965T0/1-731 AAAPGPAMCG VELDSLISQV KDLLPDLGEG FILACLEHYS YDPEQVINNI BACU013374/1-831 AAAPGPAVYS VEPDSLISQV KDLLPDLGEG FILACLKHYS YDPE------ 651 700 ENSP00000380877/1-757 LEERLAPTLS QLDRNLDREM KPDPTPLLTS RHNVFQNDEF DVFSRDSVDL ENSTTRP00000006418/1-752 LEGRLAPALS QLDRGLDRQV KPDVTPLLAS RHNIFQNDEF DVFSRDSVDL ENSBTAP00000003186/1-747 LEGRLAPTLS QLDRGLDRQV KPDPTPLLTS RHNVFQNDEF DVFSRDSVDL bmy_00965T0/1-731 LEGRLAPALG QLDRGLDRQV KPDPTPLLTS RHNIFQNVEF DMLSRDSVDL BACU013374/1-831 ---------- ---------- ---------- -----QNVEF DVLSRDSVDL 701 750 ENSP00000380877/1-757 SRVHKGKSTR KEENTRSLLN DKRAVAAQRQ RYEQYSVVVE EVPLQPGESL ENSTTRP00000006418/1-752 SRVHKGRSAR KEESARSLLN DKREVVAQRR RYEQYSVVAE EVPVQPGEDS ENSBTAP00000003186/1-747 SRVHKGR--R KEESARSLLN DKREVQAQRQ RFEQYSVVVE EVPLQPGEGS bmy_00965T0/1-731 SRVHKGR--R KEESAQSLLN DKRGVVAQRR RYEQYSVVVE EVPMQPGEDS BACU013374/1-831 SRVHKGR--R KQESARSLLX DKRGVAAQRR RYEQYSVLVE EVPVQPAEDS 751 800 ENSP00000380877/1-757 PYHSVYYEDE YDDTYDGNQV GANDADSDDE LISRRPFTIP QVLRTKVPRE ENSTTRP00000006418/1-752 PYRSDDYEDE YDDTYDGNQV GANDADSDDE LISRRPFTIP QVLRTKVPRE ENSBTAP00000003186/1-747 PYRGDDYEDE YDDTYDGNQV GANDADSDDE LISRRPFTIP QVLRTRVPGE bmy_00965T0/1-731 PY---DCEDE YDATYDGSPG GRQRC----- --RLRPFTIP QALRTKVPRE BACU013374/1-831 PY---DCEHD --------PV GANDADSGDE LLSRRPFTIP QALRTKVPRG 801 850 ENSP00000380877/1-757 GQEEDDDDEE DDADEEAPKP DHFVQDPAVL REKAEARRMA FLAKKGYRHD ENSTTRP00000006418/1-752 G-QEDEEEEE EEAEDEAPKP DHFVQDPAVL REKAEARRMA FLSRKGYRHD ENSBTAP00000003186/1-747 G-QEDEEEEE EEATVEAPKP DHFVQDPAVL REKAEARRVA FLARKGYRHD bmy_00965T0/1-731 G-QEEEEEEE EEAEDEAPKP DHFGRDPVAL RGKAEARRMA FLARKGYRHD BACU013374/1-831 GPEEDEEEEE EEAEDEAPTP DHFAQDPAAL RGKAEARRVA FLARKGYRHD 851 900 ENSP00000380877/1-757 SSTAVAGSPR GHGQSRETTQ ERRKKEANKA TRANHNRRTM ADRKRSKGMI ENSTTRP00000006418/1-752 SSMAVAGSPR GHGQSRETTQ ERRKKESSKA TRANHNRRTM TDRKRSKGMI ENSBTAP00000003186/1-747 SSTVVAGSPR GHGQSRETMQ ERRKKEASKA TRANHNRRTM ADRKRSKGMI bmy_00965T0/1-731 SSTAVAGSPR GHGQSRETTQ ERRKKEARKP HEPTTTGEPW LTAKEAKA-- BACU013374/1-831 SSTAVAGSPR GHGQSRETTQ ERRKKEAHKP HEPTTTGEPW LTAKEAKA-- 901 950 ENSP00000380877/1-757 PS ENSTTRP00000006418/1-752 PS ENSBTAP00000003186/1-747 PS bmy_00965T0/1-731 -- BACU013374/1-831 --