KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:15 2014 Check: 00 .. Name: ENSTTRP00000005280/1-618 Len: 620 Check: 6966 Weight: 1.00 Name: BACU006884/1-238 Len: 620 Check: 6656 Weight: 1.00 Name: ENSP00000273963/1-620 Len: 620 Check: 2505 Weight: 1.00 Name: bmy_11733T0/1-619 Len: 620 Check: 8091 Weight: 1.00 Name: ENSBTAP00000003191/1-617 Len: 620 Check: 8700 Weight: 1.00 // 1 50 ENSTTRP00000005280/1-618 MASESVNAKQ ARNRFTKGKR -QQHQQVKNR SSLGDGDGED SFIFEANEAW BACU006884/1-238 MASEPVNAKQ ARNRFTKGKR -QQHQQIKNR SSLGDGDGED SFIFEANEAW ENSP00000273963/1-620 MASDSMSSKQ ARNHITKGKR QQQHQQIKNR SSISDGDGED SFIFEANEAW bmy_11733T0/1-619 MASEPMNAKQ ARNRFTKGKR -QQHQQIKNR SSLGDGDGED SFIFEANEAW ENSBTAP00000003191/1-617 MASEAVNAKQ ARNRFTKGKR -Q--QQIKNR SSLGDGDGED SFLFEANEAW 51 100 ENSTTRP00000005280/1-618 KDFHGSLLQF YENGELCDIT LKXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU006884/1-238 KDFHGSLLQF YENGELCDIT LK-------- ---------- ---------- ENSP00000273963/1-620 KDFHGSLLRF YENGELCDVT LKVGSKLISC HKLVLACVIP YFRAMFLSEM bmy_11733T0/1-619 KDFHGSLLQF YENGELCDIT LKVGSKLISC HKLVLACVIP YFRAMFLSEM ENSBTAP00000003191/1-617 KDFHGSLLQF YENGELCDVT LKVGSKLISC HKLALACVIP YFKAMFLSEM 101 150 ENSTTRP00000005280/1-618 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU006884/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000273963/1-620 AEAKQTLIEI RDFDGDAIED LVKFVYSSRL TLTVDNVQPL LYAACILQVE bmy_11733T0/1-619 AEAKQTLIEI RDFDGDAIED LVKFVYSSRL TLTVDNVQPL LYAACILQVE ENSBTAP00000003191/1-617 AEAKQTLIEI RDFDGDAIED LVKFVYSSRL TLTVDNVQPL LYAACILQVE 151 200 ENSTTRP00000005280/1-618 XXXXXXXEYM KLHFHPSNCL AVRAFAESHN RIDLMDMADQ YACEHF-EVV BACU006884/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000273963/1-620 LVARACCEYM KLHFHPSNCL AVRAFAESHN RIDLMDMADQ YACDHFTEVV bmy_11733T0/1-619 LVARACCEYM KLHFHPSNCL AVRAFAESHN RIDLMDMADQ YACEHFPEVV ENSBTAP00000003191/1-617 LVARACCEYM KLHFHPSNCL AVRAFAESHN RVDLMDMADQ YACEHFTEVV 201 250 ENSTTRP00000005280/1-618 ECEDFVSVSP QHLHKLLSSS DLNIENEKQV YSAAIKWLLA NPQHHSKWLD BACU006884/1-238 ---------- ---------- ------KMGI YSKTVH---- ---------- ENSP00000273963/1-620 ECEDFVSVSP QHLHKLLSSS DLNIENEKQV YNAAIKWLLA NPQHHSKWLD bmy_11733T0/1-619 ECEDFVSVSP QHLHKLLSSS DLNIENEKQV YSAAIKWLLA NPQHHSKWLD ENSBTAP00000003191/1-617 ECEDFVSVSP QHLHKLLSSS DLNIENEKQV YSAAIKWLLA NPQHHPLWLD 251 300 ENSTTRP00000005280/1-618 ETLAQVRLPL LPVDFLMGVV AKEQIVKQNL KCRDLLDEAR NYHLHLSSRA BACU006884/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000273963/1-620 ETLAQVRLPL LPVDFLMGVV AKEQIVKQNL KCRDLLDEAR NYHLHLSSRA bmy_11733T0/1-619 ETLAQVRLPL LPVDFLMGVV AKEQIVKQNL KCRDLLDEAR NYHLHLSSRA ENSBTAP00000003191/1-617 ETLAQVRLPL LPVDFLMGVV AKEQIVKQNL KCRDLLDEAR NYHLHLSSRA 301 350 ENSTTRP00000005280/1-618 VPDFEYSIRT TPRKHTAGVL FCVGGRDRSS DPFRSIECYS INKNSWFFGP BACU006884/1-238 ---------- ------NGVL FCVGGRGGSG DPFRSIECYS INKNSWFFGP ENSP00000273963/1-620 VPDFEYSIRT TPRKHTAGVL FCVGGRGGSG DPFRSIECYS INKNSWFFGP bmy_11733T0/1-619 VPDFEYSIRT TPRKHTAGVL FCVGGRGGSG DPFRSIECYS INKNSWFFGP ENSBTAP00000003191/1-617 VPDFEYSIRT TPRKHTAGVL FCVGGRGGSG DPFRSIECYS INKNSWFFGP 351 400 ENSTTRP00000005280/1-618 EMNSRRRHVG VISVEGKVYA VGGHDGNEHL GSMEMFDPLN NKWMMKASMN BACU006884/1-238 EMNSRRRHVG VISVEG---- ---------- ---------- ---------- ENSP00000273963/1-620 EMNSRRRHVG VISVEGKVYA VGGHDGNEHL GSMEMFDPLT NKWMMKASMN bmy_11733T0/1-619 EMNSRRRHVG VISVEGKVYA VGGHDGNEHL GSMEMFDPLT NKWMMKASMN ENSBTAP00000003191/1-617 EMNSRRRHVG VISVEGKVYA VGGHDGNEHL GSMEMFDPLT NKWMMKASMN 401 450 ENSTTRP00000005280/1-618 TKRRGIALAS LGGPIYAIGG LDDNTCFNDV ERYDIESDQW STVAPMNTPR BACU006884/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000273963/1-620 TKRRGIALAS LGGPIYAIGG LDDNTCFNDV ERYDIESDQW STVAPMNTPR bmy_11733T0/1-619 TKRRGIALAS LGGPVYAIGG LDDNTCFNDV ERYDIESDQW STVAPMNTPR ENSBTAP00000003191/1-617 TKRRGIALAS LGGPIYAIGG LDDNTCFNDV ERYDIESDQW STVAPMNTPR 451 500 ENSTTRP00000005280/1-618 GGVGSVALVN HVYAVGGNDG VASLSSVERY DPHLDKWIEV KEMGQRRAGN BACU006884/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000273963/1-620 GGVGSVALVN HVYAVGGNDG MASLSSVERY DPHLDKWIEV KEMGQRRAGN bmy_11733T0/1-619 GGVGSVALVN HVYAVGGNDG VASLSSVERY DPHLDKWIEV KEMGQRRAGN ENSBTAP00000003191/1-617 GGVGSVALVN HVYAVGGNDG VASLSSVERY DPHLDKWIEV KEMGQRRAGN 501 550 ENSTTRP00000005280/1-618 GVSELHGCLY VVGGFDDNSP LSSVERYDPR SNKWDYVAAL TTPRGGVGIA BACU006884/1-238 ---------- ---GFDDNSP LSSVERYDPR SNKWDYVAAL TTPRGGVGIA ENSP00000273963/1-620 GVSKLHGCLY VVGGFDDNSP LSSVERYDPR SNKWDYVAAL TTPRGGVGIA bmy_11733T0/1-619 GVSELHGCLY VVGGFDDNSP LSSVERYDPR SNKWDYVAAL TTPRGGVGIA ENSBTAP00000003191/1-617 GVSELHGCLY VVGGFDDNSP LSSVERYDPR SNKWDYVAAL TTPRGGVGIA 551 600 ENSTTRP00000005280/1-618 TVMGKIFAVG GHNGNAYLNT VEAFDPVLNR WELVGSVSHC RAGAGVAVCA BACU006884/1-238 TVMGKIFAVG GHNGNAYLNT VEAFDPVLNR WELVGSVSHC RAGAGVAVCA ENSP00000273963/1-620 TVMGKIFAVG GHNGNAYLNT VEAFDPVLNR WELVGSVSHC RAGAGVAVCS bmy_11733T0/1-619 TVMGNIFAVG GHNGNAYLNT VEAFDPVLNR WELVGSVSHC RAGAGVAVCA ENSBTAP00000003191/1-617 TVMGKIFAVG GHNGNAYLNT VEAFDPVLNR WELVGSVSHC RAGAGVAVCA 601 650 ENSTTRP00000005280/1-618 CLTSQIRDVG HGSSNVVDCM BACU006884/1-238 CLTSQIRDVG HGSSNVVDCM ENSP00000273963/1-620 CLTSQIRDVG HGSNNVVDCM bmy_11733T0/1-619 CLTSQIRDVG HGSSNVVDCM ENSBTAP00000003191/1-617 CLTSQIRDVG HGSSNVVDCM