KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:20:17 2014 Check: 00 ..
Name: BACU011021/1-161 Len: 1451 Check: 7313 Weight: 1.00
Name: ENSP00000231498/1-1391 Len: 1451 Check: 4301 Weight: 1.00
Name: ENSTTRP00000001088/1-1391 Len: 1451 Check: 3533 Weight: 1.00
Name: bmy_07501T0/1-1304 Len: 1451 Check: 8242 Weight: 1.00
Name: ENSBTAP00000003193/1-1391 Len: 1451 Check: 5838 Weight: 1.00
//
1 50
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000001088/1-1391 ---------- ---------- ---------- ---------- ----------
bmy_07501T0/1-1304 AEKLASNSPP YESEVRHALA PGRLFGARAL SFGAELASWV FSYFSLLFDF
ENSBTAP00000003193/1-1391 ---------- ---------- ---------- ---------- ----------
51 100
BACU011021/1-161 ---------- ---------M PASTSATALQ EALENAGCLI DRQLQGDCMF
ENSP00000231498/1-1391 ---------- MPSSLLGAAM PASTSAAALQ EALENAGRLI DRQLQEDRMY
ENSTTRP00000001088/1-1391 ---------- MPSSLLGSAM PASTSAAALQ EALENAGRLI DRQLQEDRMY
bmy_07501T0/1-1304 LRSLPSPIFD MPSSLLGSAM PASTSAAALQ EALENAGRLI DRQLQEDRMY
ENSBTAP00000003193/1-1391 ---------- MPSSLLGSAM PASTSAAALQ EALENAGRLI DRQLQEDRMY
101 150
BACU011021/1-161 PDLSDLLMGS APNNPTVSGM SDMVYPLQGP GLLSVPNLPE ISSIRRVPLP
ENSP00000231498/1-1391 PDLSELLMVS APNNPTVSGM SDMDYPLQGP GLLSVPNLPE ISSIRRVPLP
ENSTTRP00000001088/1-1391 PDLSDLLMVS APNNPTVSGM SDMDYPLQGP GLLSVPNLPE ISSIRRVPLP
bmy_07501T0/1-1304 PDLSDLLMVS APNNPTVSGM SDMDYPLQGP GLLSVPNLPE ISSIRRVPLP
ENSBTAP00000003193/1-1391 PDLSELLMVS APNNPTVSGM SDMDYPLQGP GLLSVPNLPD ISSIRRVPLP
151 200
BACU011021/1-161 PELVEQFGHI ---------- ---------- --LLLY---- ----------
ENSP00000231498/1-1391 PELVEQFGHM QCNCMMGVFP PISRAWLTID SDIFMWNYED GGDLAYFDGL
ENSTTRP00000001088/1-1391 PELVEQFGHM QCNCMMGVFP AISRAWLTID SDIFMWNYED GGDLAYFDGL
bmy_07501T0/1-1304 PELVEQFGHM QCNCMMGVFP PISRAWLTID SDVFMWNYED GGDLAYFDGL
ENSBTAP00000003193/1-1391 PELVEQFGHM QCNCMMGVFP PISRAWLTID SDIFMWNYED GGDLAYFDGL
201 250
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 SETILAVGLV KPKAGIFQPH VRHLLVLATP VDIVILGLSY ANLQTGSGVL
ENSTTRP00000001088/1-1391 NETILAVGLV KPKAGIFQPH VRHLLVLATP VDIVILGLSY TNLQTGSGVL
bmy_07501T0/1-1304 SETILAVGLV KPKAGIFQPH VRHLLVLATP VDVVILGLS- ------SGVL
ENSBTAP00000003193/1-1391 SETILAVGLV KPKPGIFQPH VRHLLVLATP VDIVILGLSY TNLQTGSGVL
251 300
BACU011021/1-161 ---------L HPTP--SIPT NQQ------- ---------- ----------
ENSP00000231498/1-1391 NDSLSGGMQL LPDPLYSLPT DNTYLLTITS TDNGRIFLAG KDGCLYEVAY
ENSTTRP00000001088/1-1391 NDSMCGGMQL LPDPLYSLPT DNTYLLTITS TDNGRIFLAG KDGCLYEVAY
bmy_07501T0/1-1304 NDSMCGGMQL LPDPLYSLPT DNTYLLAITS TDNGRIFLAG KDGCLYEVAY
ENSBTAP00000003193/1-1391 NDSMCGGMQL LPDPLYSLPT DNTYLLTITS TDNGRIFLAG KDGCLYEVAY
301 350
BACU011021/1-161 ---------- ----NKDKSS ---------- ---------- ----------
ENSP00000231498/1-1391 QAEAGWFSQR CRKINHSKSS LSFLVPSLLQ FTFSEDDPIL QIAIDNSRNI
ENSTTRP00000001088/1-1391 QAEAGWFSQR CRKINHSKSA LSFLVPSLLQ FTFSEDDPIV QIAIDNSRNI
bmy_07501T0/1-1304 QAEAGWFSQR CRKINHSKSA LSFLVPSLLQ FTFSEDDPIV QIAIDNSRNI
ENSBTAP00000003193/1-1391 QAEAGWFSQR CRKINHSKSP LSFLVPSLLQ FTFSEDDPIV QIAVDNSRNI
351 400
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 LYTRSEKGVI QVYDLGQDGQ GMSRVASVSQ NAIVSAAGNI ARTIDRSVFK
ENSTTRP00000001088/1-1391 LYTRSEKGVI QVYDLGHDGQ GMNRVASVSQ NSIVSAAGNI ARTIDRSVFK
bmy_07501T0/1-1304 LYTRSEKGVI QVYDLGHDGQ GMNRVASVSQ NSIVSAAGNI ARTIDRSVFK
ENSBTAP00000003193/1-1391 LYTRSEKGVI QVYDLGHDGQ GMNRVASVSQ NSIVSAAGNI ARTIDRSVFK
401 450
BACU011021/1-161 ---------- ---------- ---------- ---------- RP--------
ENSP00000231498/1-1391 PIVQIAVIEN SESLDCQLLA VTHAGVRLYF STCPFRQPLA RPNTLTLVHV
ENSTTRP00000001088/1-1391 PIVQIAVIEN SESLDCQLLA VTHAGVRLYF STCPFRQPWT RPNTLTLVHI
bmy_07501T0/1-1304 PIVQIAVIEN SESLDCQLLA VTHAGVRLYF STCPFRQPWA RPNTLTLVHI
ENSBTAP00000003193/1-1391 PIVQIAVIEN SESLDCQLLA VTHAGVRLYF STCPFRQPLA RPNTLTLVHV
451 500
BACU011021/1-161 ---------- --ARPTKAER A--------- ---------- ----------
ENSP00000231498/1-1391 RLPPGFSASS TVEKPSKVHR ALYSKGILLM AASENEDNDI LWCVNHDTFP
ENSTTRP00000001088/1-1391 RLPPGFSASS TVEKPSKVHK ALYSKGILLM AASENEDNDI LWCVNHDTFP
bmy_07501T0/1-1304 RLPPGFSASS TVEKPSKVHK ALYSKGILLM AASENEDNDI LWCVNHDTFP
ENSBTAP00000003193/1-1391 RLPPGFSASS TVEKPSKVHK ALYSKGILLM AASENEDNDI LWCVNHDTFP
501 550
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 FQKPMMETQM TAGVDGHSWA LSAIDELKVD KIITPLNKDH IPITDSPVVV
ENSTTRP00000001088/1-1391 FQKPMMETQM TTRVDGHSWA LSAIDEFKVD KIITPLNKDH IPITDSPVVV
bmy_07501T0/1-1304 FQKPMMETQM TTRVDGHSWA LSAIDEFKVD KIITPLNKDH IPITDSPVVV
ENSBTAP00000003193/1-1391 FQKPMMETQM TTRVDGHSWA LSAIDELKVD KIITPLNKDH IPITDSPVVV
551 600
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 QQHMLPPKKF VLLSAQGSLM FHKLRPVDQL RHLLVSNVGG DGEEIERFFK
ENSTTRP00000001088/1-1391 QQHMLPPKKF VLLSAQGSLM FHKLRPVDQL RHLLVSNVGG DGEEIERFFK
bmy_07501T0/1-1304 QQHMLPPKKF VLLSAQGSLM FHKLRPVDQL RHLLVSNVGG DGEEIERFFK
ENSBTAP00000003193/1-1391 QQHMLPPKKF VLLSAQGSLM FHKLRPVDQL RHLLVSNVGG DGEEIERFFK
601 650
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 LHQEDQACAT CLILACSTAA CDREVSAWAT RAFFRYGGEA QMRFPTTLPP
ENSTTRP00000001088/1-1391 LHQEDQACAT CLILACSTAA CDREVSAWAT RAFFRYGGEA QMRFPATLPA
bmy_07501T0/1-1304 LHQ------- ---------- ---------- ---------- ----------
ENSBTAP00000003193/1-1391 LHQEDQACAT CLILACSTAA CDREVSAWAT RAFFRYGGEA QMRFPTTLPT
651 700
BACU011021/1-161 ---------- --------PT G--------- ---------- ----------
ENSP00000231498/1-1391 PSNVGPILGS PVYSSSPVPS GSPYPNPSFL GTPSHGIQPP AMSTPVCALG
ENSTTRP00000001088/1-1391 PSNVGPILGS PVYSGSPIPS GSTYLNPSFL GTPSQGVHPP AMSTPVCAMG
bmy_07501T0/1-1304 ---------- --CTSSPVPS GSTYLNPSFL GTPSQGVHPP AMSTPVCAVG
ENSBTAP00000003193/1-1391 PSNVGPILGS PVYSSSPVPS GTLYPNPSFL GTPSQGVHPP AVSTPVCALG
701 750
BACU011021/1-161 RPADR----- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 NPATQATNMS CVTGPEIVYS GKHNGICIYF SRIMGNIWDA SLVVERIFKS
ENSTTRP00000001088/1-1391 NPATQATSMS CMAGPEIVYS GKHNGICIYF SRIMGNIWDA SLVVERIFKS
bmy_07501T0/1-1304 NPATQATSMS CMAGPEIV-- ---------- -----NIWDA SLVVERVFKS
ENSBTAP00000003193/1-1391 SPATQATSMS CMAGPEIVYS GKHNGICIYF SRIMGNIWDA SLVVERVFKS
751 800
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 GNREITAIES SVPCQLLESV LQELKGLQEF LDRNSQFAGG PLGNPNTTAK
ENSTTRP00000001088/1-1391 GNREITAXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGG PLGNPNTTAK
bmy_07501T0/1-1304 GNREITAIES SVPSQLLESV LQELK----- ---------- ----------
ENSBTAP00000003193/1-1391 GNREITAIES SVPSQLLESV LLELKGLQEF LDRNSQFTGG PLGNPNTAAK
801 850
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 VQQRLIGFMR PENGNPQQMQ QELQRKFHEA QLSEKISLQA IQQLVRKSYQ
ENSTTRP00000001088/1-1391 VQQRLIGFMR PENGNTQQMQ QELQRKFHEA QLSEKVSLQA IQQLVRKSYQ
bmy_07501T0/1-1304 ---------- ---------- --------EA QLSEKVSLQA IQQLVRKSYQ
ENSBTAP00000003193/1-1391 VQQRLIGFMR PENGNTQQMQ QELQRKLHEA QLSEKISLQA IQQLVRKSYQ
851 900
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 ALALWKLLCE HQFTIIVAEL QKELQEQLKI TTFKDLVIRD KELTGALIAS
ENSTTRP00000001088/1-1391 ALALWKLLCE HQFTAIVGEL QKEFQEQLKI TTFKDLVIRD KELTGALIAS
bmy_07501T0/1-1304 ALALWKLLCE HQFTAIVGEL QKEFQEQLKI TTFKDLVIRD KELSGALIAS
ENSBTAP00000003193/1-1391 ALALWKLLCE HQFTVIVGEL QKEFQEQLKI TTFKDLVIRD KELTGALIAS
901 950
BACU011021/1-161 ---------- ---------- ---------- ------TSVL LQRSHR----
ENSP00000231498/1-1391 LINCYIRDNA AVDGISLHLQ DICPLLYSTD DAICSKANEL LQRSRQVQNK
ENSTTRP00000001088/1-1391 LINCYIRDNA AVDGISLHLQ DICPLLYSTD DAVCSKANEL LQRSRQVQNK
bmy_07501T0/1-1304 LINCYIRDNA AVDGISLHLQ DICPLLYSTD DA----ANEL LQRSRQVQNK
ENSBTAP00000003193/1-1391 LINCYIRDNA AVDGISLHLQ DICPLLYSTD DAICSKANEL LQHSRQVQNK
951 1000
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 TEKERMLRES LKEYQKISNQ VDLSNVCAQY RQVRFYEGVV ELSLTAAEKK
ENSTTRP00000001088/1-1391 IEKERMLRES LKEYQKISNQ VDLSSVCAQY RQVRFYEGVV ELSLTAAEKK
bmy_07501T0/1-1304 IEKERMLRES LKEYQKISNQ VDLSSVCAQY RQVRFYEGVV ELSLTAAEKK
ENSBTAP00000003193/1-1391 IEKERMLRES LKEYQKISNQ VDLSSVCAQY RQVRFYEGVV ELSLTAAEKK
1001 1050
BACU011021/1-161 ---------- ---------- ---------- ---GATLQLP RLSNGGQRVP
ENSP00000231498/1-1391 DPQGLGLHFY KHGEPEEDIV GLQAFQERLN SYKCITDTLQ ELVNQSKAAP
ENSTTRP00000001088/1-1391 DPQGLGLHFY KHGEPEEDIV GLQAFQERLN SYKCITDTLQ ELVNQSKAAP
bmy_07501T0/1-1304 DPQGLGLHFY KHGEPEEDIV GLQAFQERLN SYKCITDTLQ ELVNQSKAAP
ENSBTAP00000003193/1-1391 DPQGLGLHFY KHGEPEEDIV GLQAFQERLN SYKCITDTLQ ELVNQSKAAP
1051 1100
BACU011021/1-161 KS-------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 QSPSVPKKPG PPVLSSDPNM LSNEEAGHHF EQMLKLSQRS KDELFSIALY
ENSTTRP00000001088/1-1391 QSPSVPKKPG PPVLSSDPNM LSNEEAGHHF EQMLKLSQRS KDELFSIALY
bmy_07501T0/1-1304 QSPSVPKKPG PPVLSSDPNM LSNEEAGHHF EQMLKLSQRS KDELFSIALY
ENSBTAP00000003193/1-1391 QSPSVPKKPG PPVLSSDPNM LSNEEAGHHF EQMLKLSQRS KDELFSIALY
1101 1150
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 NWLIQVDLAD KLLQVASPFL EPHLVRMAKV DQNRVRYMDL LWRYYEKNRS
ENSTTRP00000001088/1-1391 NWLIQADLAD KLLQIASPFL EPHLVRMAKV DQNKVRYMDL LWRYYEKNRS
bmy_07501T0/1-1304 NWLIQADLAD KLLQIASPFL EPHLVRMAKV DQNKVRYMDL LWRYYEKNRS
ENSBTAP00000003193/1-1391 NWLIQADLAD KLLQIASPFL EPHLVRMAKV DQNKVRYMDL LWRYYEKNRS
1151 1200
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 FSNAARVLSR LADMHSTEIS LQQRLEYIAR AILSAKSSTA ISSIAADGEF
ENSTTRP00000001088/1-1391 FSNAARVLSK LADMHSTEIS LQQRLEYIAR AILSAKSSTA ISSIAADGEF
bmy_07501T0/1-1304 FNNAARVLSK LADMHSTEIS LQQRLEYIAR AILSAKSSTA ISSIAADGEF
ENSBTAP00000003193/1-1391 FSSAARVLSK LADMHSTEIS LQQRLEYIAR AILSAKSSTA ISSTAADGEF
1201 1250
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 LHELEEKMEV ARIQLQIQET LQRQYSHHSS VQDAVSQLDS ELMDITKLYG
ENSTTRP00000001088/1-1391 LHELEEKMEV ARIQLQIQET LQRQYSHHSS VQDAISQLDS ELMDITKLYG
bmy_07501T0/1-1304 LHELEEKMEV ARIQLQIQET LQRQYSHHSS VQDAISQLDS ELMDITKLYG
ENSBTAP00000003193/1-1391 LHELEEKMEV ARIQLQIQET LQRQYSHHSS VQDAISQLDS ELMDITKLYG
1251 1300
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 EFADPFKLAE CKLAIIHCAG YSDPILVQTL WQDIIEKELS DSVTLSSSDR
ENSTTRP00000001088/1-1391 EFADPFKLAE CKLAIIHCAG YSDPILVQTL WQDIIEKELN ESVTLSSPDR
bmy_07501T0/1-1304 EFADPFKLAE CKLAIIHCAG YSDPILVQTL WQDIIEKELN ESVTLSSPDR
ENSBTAP00000003193/1-1391 EFADPFKLAE CKLAIIHCAG YSDPILVQTL WQDIIEKELN ESVTLSSPDR
1301 1350
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 MHALSLKIVL LGKIYAGTPR FFPLDFIVQF LEQQVCTLNW DVGFVIQTMN
ENSTTRP00000001088/1-1391 MHALSLKIVL LGKMYAGTPR FFPLDFIVQF LEQQVCTLNW DVGFVIQTMN
bmy_07501T0/1-1304 MHALSLKTVL LGKMYASTPR FFP------- LEQQVCTLNW DVGFVIQTMN
ENSBTAP00000003193/1-1391 MHALSLKIVL LGKIYAGTPR FFPLDFIVQF LEQQVCTLNW DVGFVIQTMN
1351 1400
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 EIGVPLPRLL EVYDQLFKSR DPFWNRMKKP LHLLDCIHVL LIRYVENPSQ
ENSTTRP00000001088/1-1391 EIGVPLPRLL EVYDHLFKSR DPFWNRMKKP LHLLDCIHVL LTRYVENPSQ
bmy_07501T0/1-1304 EIGVPLPRLL EVYDHLFKSR DPFWNRMKKP LHLLDCIHVL LTRYVENPSQ
ENSBTAP00000003193/1-1391 EIGVPLPRLL EVYDHLFKSR DPFWNRMKKP LHLLDCIHVL LTRYVENPSQ
1401 1450
BACU011021/1-161 ---------- ---------- ---------- ---------- ----------
ENSP00000231498/1-1391 VLNCERRRFT NLCLDAVCGY LVELQSMSSS VAVQAITGNF KSLQAKLERL
ENSTTRP00000001088/1-1391 VLNCERRRFT NLCLDAVCGY LVELQSMSSS VTVQTITGNF KSLQAKLERL
bmy_07501T0/1-1304 VLNCERRRFT NLCLDAVCGY LVELQSMSSS AAIQAITGNF KSLQAKLERL
ENSBTAP00000003193/1-1391 VLNCERRRFT NLCLDAVCGY LVELQSMSSS AAVQAITGNF KSLQAKLERL
1451 1500
BACU011021/1-161 -
ENSP00000231498/1-1391 H
ENSTTRP00000001088/1-1391 H
bmy_07501T0/1-1304 H
ENSBTAP00000003193/1-1391 H