KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:17 2014 Check: 00 .. Name: ENSP00000301455/1-406 Len: 413 Check: 7131 Weight: 1.00 Name: ENSTTRP00000009239/1-403 Len: 413 Check: 9143 Weight: 1.00 Name: bmy_11766T0/1-412 Len: 413 Check: 9891 Weight: 1.00 Name: BACU002529/1-412 Len: 413 Check: 9794 Weight: 1.00 Name: ENSBTAP00000003204/1-410 Len: 413 Check: 6504 Weight: 1.00 // 1 50 ENSP00000301455/1-406 MSGAPTAGAA LMLCAATAVL LSAQGGPVQS KSPRFASWDE MNVLAHGLLQ ENSTTRP00000009239/1-403 MRCAPTAGAA LVLCAATAGL LSAQGRPEPP EKPRFAS-DE VNVLAHGLLQ bmy_11766T0/1-412 MRCAPTAGAA LVLCAATAGL LSAQGRPEPP ETPRFASWDE VNVLAHGLLQ BACU002529/1-412 MRCAPTAGAA LVLCAATAGL LSAQGRPEPP ETPRFASWDE VNVLAHGLLQ ENSBTAP00000003204/1-410 MRCAPTAGAA LMLCAATAGL LSAQGRPEPP ETPRFASWDE VNVLAHGLLQ 51 100 ENSP00000301455/1-406 LGQGLREHAE RTRSQLSALE RRLSACGSAC QGTEGSTDLP LAPESRVDP- ENSTTRP00000009239/1-403 LGNGLREH-E RTRGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- bmy_11766T0/1-412 LGNGLREHVE RTRGQLGELE RRLGACGAAC KDPEGSAAPP FAPENLVPP- BACU002529/1-412 LGNGLREHVE RTRGQLGELE RRLGACGAAC KDPEGSAAPP FAPENLVPP- ENSBTAP00000003204/1-410 LGHGLREHVE RTRGQLGELE RRLGACGAAC KDPEGSAAPP RAQANLVNPG 101 150 ENSP00000301455/1-406 ------EVLH SLQTQLKAQN SRIQQLFHKV AQQQRHLEKQ HLRIQHLQSQ ENSTTRP00000009239/1-403 ------XXXX XXXXXXXXQN SRIQQL-QKV AQQQRHLEKQ QLRIQNLQSQ bmy_11766T0/1-412 GGDAVPETLR SFQTQLKAQN SRIQQLFQKV AQQQRHLEKQ HLRIQNLQNQ BACU002529/1-412 AGDAVPETLR SFQTQLKAQN SRIQQLFQKV AQQQRHLEKQ HLRIQNLQNQ ENSBTAP00000003204/1-410 GGDASPETLR SLKTQLEAQN SRIQQLFQKV AQQQRHLEKQ QLRIQNLQSQ 151 200 ENSP00000301455/1-406 FGLLDHKHLD HEVAKPARRK RLPEMAQPVD PAHNVSRLHR LPRDCQELFQ ENSTTRP00000009239/1-403 MGHLAPMHLG HGVAKRARRK RLPKMAQLAG PAQNISRLHR LPRDCQELFE bmy_11766T0/1-412 MGHLAPMHLG HGVAKRARRK RLPKMAQLAG PAHNISRLHK LPRDCQELFE BACU002529/1-412 MGHLAPMHLG HGVAKRARRK RLPKMAQLAG PAHNISRLHK LPRDCQELFE ENSBTAP00000003204/1-410 MDHLAPRHLG HEMAKPARRK RLPKMAQLAG PAHNISRLHR LPRDCQELFE 201 250 ENSP00000301455/1-406 VGERQSGLFE IQPQGSPPFL VNCKMTSDGG WTVIQRRHDG SVDFNRPWEA ENSTTRP00000009239/1-403 EGERQSGLFQ IQPRGSSSFL VNCKMTSDGG WTVIQRRQDG SVYFNQPWDA bmy_11766T0/1-412 EGERQSGLFQ IQPQGSSSFL VNCKMTSDGG WTVIQRRQDG SVDFNQPWEA BACU002529/1-412 EGERQSGLFQ IQPQGSSSFL VNCKMTSDGG WTVIQRRQDG SVDFNQPWEA ENSBTAP00000003204/1-410 EGERESGLFQ IQPQGSPPFL VNCKMTSDGG WTVIQRRQDG SVDFNQPWEA 251 300 ENSP00000301455/1-406 YKAGFGDPHG EFWLGLEKVH SITGDRNSRL AVQLRDWDGN AELLQFSVHL ENSTTRP00000009239/1-403 YKDGFGDPQG EFWLGLEKVH RIMGERGSRL AVHLQDWEGN AESLQFPVHL bmy_11766T0/1-412 YKDGFGDPQG EFWLGLEKVH RIMGDRGSRL AVQLQDWEGN AESLQFPVHL BACU002529/1-412 YRDGFGDPQG EFWLGLEKVH RIMGDRGSRL AVQLQDWEGN AESLQFPVHL ENSBTAP00000003204/1-410 YKDGFGDPQG EFWLGLEKVH HILGDRGSRL AVQLQDWEGN AESLQFPIHL 301 350 ENSP00000301455/1-406 GGEDTAYSLQ LTAPVAGQLG ATTVPPSGLS VPFSTWDQDH DLRRDKNCAK ENSTTRP00000009239/1-403 GGEDTAYSLQ LTAPVASKLG ATAFSPSGLS LPFSTWDQDH DLRGDKNCAK bmy_11766T0/1-412 GGEDTAYSLQ LTAPVASKLG TTTFSPSGLS LPFSTWDQDH DLRGDKNCAK BACU002529/1-412 GGEDTAYSLQ LTAPVASKLG TTTFSPSGLS LPFSTWDQDH DLRGDKNCAK ENSBTAP00000003204/1-410 GGEDTAYSLQ LTPPVASKLG ATTFSPSGLS LPFSTWDQDH DLRGDKNCAR 351 400 ENSP00000301455/1-406 SLSGGWWFGT CSHSNLNGQY FRSIPQQRQK LKKGIFWKTW RGRYYPLQAT ENSTTRP00000009239/1-403 SLSGGWWFGT CGHSNLNGQY FHSIPRQRQQ LKKGIFWKTW RGRYYPLQAT bmy_11766T0/1-412 SLSGGWWFGT CGHSNLNGQY FHSIPRQRQQ LKKGIFWKTW RGRYYPLQAT BACU002529/1-412 SLSGGWWFGT CGHSNLNGQY FHSIPRQRQQ LKKGIFWKTW RGRYYPLQAT ENSBTAP00000003204/1-410 SLSGGWWFGT CSHSNLNGQY FHSIPRQRQQ RKKGIFWKTW RGRYYPLQAT 401 450 ENSP00000301455/1-406 TMLIQPMAAE AAS ENSTTRP00000009239/1-403 TMLIQPTAAE AAS bmy_11766T0/1-412 TMLIQPTAAE AAS BACU002529/1-412 TMLIQPTAAE AAS ENSBTAP00000003204/1-410 TILVQPTAAS ---