KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:18 2014 Check: 00 .. Name: ENSTTRP00000014945/1-779 Len: 782 Check: 119 Weight: 1.00 Name: ENSP00000365007/1-782 Len: 782 Check: 3719 Weight: 1.00 Name: ENSBTAP00000003212/1-782 Len: 782 Check: 811 Weight: 1.00 Name: bmy_09924T0/1-694 Len: 782 Check: 7764 Weight: 1.00 Name: BACU005670/1-780 Len: 782 Check: 4411 Weight: 1.00 // 1 50 ENSTTRP00000014945/1-779 MEVKKLSISW QFLIVLVLIL QILSALDFDP YRVLGVSRTA SQADIKKAYK ENSP00000365007/1-782 MEVRKLSISW QFLIVLVLIL QILSALDFDP YRVLGVSRTA SQADIKKAYK ENSBTAP00000003212/1-782 MEVKKLGISW QFLIVLVLIL QILSALDFDP YRVLGVSRTA SQADIKKAYK bmy_09924T0/1-694 MEVKKLSISW QFLIVLVLIL QILSALDFDP YRVLGVSRTA SQADIKKAYK BACU005670/1-780 MEVKKLSISW QFLIVLVLIL QILSALDFDP YRVLGVSRTA SQADIKKAYK 51 100 ENSTTRP00000014945/1-779 KLAREWHPDK NKDPGAEDKF IQISKAYEIL SNEEKRSHYD HYGDAGENQG ENSP00000365007/1-782 KLAREWHPDK NKDPGAEDKF IQISKAYEIL SNEEKRSNYD QYGDAGENQG ENSBTAP00000003212/1-782 KLAREWHPDK NKDPGAEDKF IQISKAYEIL SNEEKRSHYD HYGDAGESQG bmy_09924T0/1-694 KLAREWHPDK NKDPGAEDKF IQISKAYEIL SNEEKRSHYD HYGDAGENQG BACU005670/1-780 KLAREWHPDK NKDPGAEDKF IQISKAYEIL SNEEKRSHYD HYGDAGENQG 101 150 ENSTTRP00000014945/1-779 HQK--PQREY RFRHFHENFY FDEPFFHFPF NSERRDSIDE KYLLHFSHYV ENSP00000365007/1-782 YQKQQQQREY RFRHFHENFY FDESFFHFPF NSERRDSIDE KYLLHFSHYV ENSBTAP00000003212/1-782 YQKQQQQREY RFRHFHENFY FDESFFHFPF NSERRDSIDE KYLLHFSHYV bmy_09924T0/1-694 HQK--QQREY RFRHFHENFY FDEPFFHFPF NSERRDSIDE KYLLHFSHYV BACU005670/1-780 HQK--QQREY RFRHFHENFY FDEPFFHFPF NSERRDSIDE KYLLHFSHYV 151 200 ENSTTRP00000014945/1-779 NEVVPDSFKK PYLIKITSDW CFSCIHIEPV WKEVVQELEG LGVGIGVVHA ENSP00000365007/1-782 NEVVPDSFKK PYLIKITSDW CFSCIHIEPV WKEVIQELEE LGVGIGVVHA ENSBTAP00000003212/1-782 NEVVPDSFKK PYLIKITSDW CFSCIHIEPV WKEAVQELEG LGVGIGVVHA bmy_09924T0/1-694 NEVVPDSFKK PYLIKITSDW CFSC------ ---------- --VGIGVVHA BACU005670/1-780 NEVVPDSFKK PYLIKITSDW CFSCIHIEPV WKEVVQELEG LGVGIGVVHA 201 250 ENSTTRP00000014945/1-779 GYERRLAHHL GAHSTPAILG IINGKISFFH NAVVRENLRQ FVESLLPGNL ENSP00000365007/1-782 GYERRLAHHL GAHSTPSILG IINGKISFFH NAVVRENLRQ FVESLLPGNL ENSBTAP00000003212/1-782 GYERRLAHHL GAHSTPSILG IINGKVSFFH NAVVSENLWQ FVESLLPGNL bmy_09924T0/1-694 GYERRLAHHL GAHSTPAILG IINGKISFFH NAVVRENLRQ FVESLLPGNL BACU005670/1-780 GYERRLAHHL GAHSTPAILG IINGKISFFH NAVVRENLRQ FVESLLPGNL 251 300 ENSTTRP00000014945/1-779 VEKVTSKNYV RFLSGWQQEN KPHVLLFDQM PVVPLLYKLT AFAYKDYLSF ENSP00000365007/1-782 VEKVTNKNYV RFLSGWQQEN KPHVLLFDQT PIVPLLYKLT AFAYKDYLSF ENSBTAP00000003212/1-782 VEKVTNKNYV RFLSGWQQEN KPRVLLFDQM PTVPLLYKLT AFAYKDYLSF bmy_09924T0/1-694 VE-------- ---------- ---------- -------KLT AFAYKDYLSF BACU005670/1-780 VEKVTDKNYV RFLSGWQQEN KPRVLLFDQM PVVPLLYKLT AFAYKDYLSF 301 350 ENSTTRP00000014945/1-779 GYVYVGLRGA EEMTRQYNVN VYTPTILIFK EHIHKPADVI QARGMKKQVI ENSP00000365007/1-782 GYVYVGLRGT EEMTRRYNIN IYAPTLLVFK EHINRPADVI QARGMKKQII ENSBTAP00000003212/1-782 GYVYVGLRGA EEMTRQYDVN VYTPTILIFK EHIHKPADVI QARGMKRQVI bmy_09924T0/1-694 GYVYVGLRGA EEMTRQYNVN VYAPTILIFK EHIHKPADVI QARGMKKQVI BACU005670/1-780 GYVYVGLRGA EEMTRQYNVN VYAPTILIFK EHIHKPADVI QARGMKKQVI 351 400 ENSTTRP00000014945/1-779 DDFITQNKYL LAARLTSQKL FHELCPVKRS HRQRKYCVVL LTAEATKLSK ENSP00000365007/1-782 DDFITRNKYL LAARLTSQKL FHELCPVKRS HRQRKYCVVL LTAETTKLSK ENSBTAP00000003212/1-782 DDFITQNKYL LAARLTSQKL FHELCPVKRS HRQRKYCVVL LTAEATKLSK bmy_09924T0/1-694 DDFITQNKYL LAARLTSQKL FHELCPVKRS LRQRKYCVVL LTAEATKLSK BACU005670/1-780 GDFITQNKYL LAARLTSQKL FHELCPVKRS LRQRKYCVVL LTAEATKMSK 401 450 ENSTTRP00000014945/1-779 PFEAFLSFAL ANTQDTVRFV HVYSNRQQEF ANTLLPDSDA FQGKSAVSIL ENSP00000365007/1-782 PFEAFLSFAL ANTQDTVRFV HVYSNRQQEF ADTLLPDSEA FQGKSAVSIL ENSBTAP00000003212/1-782 PFEAFLSFAL ANTQDTVRFV HVYSNRQQEF ASTLLPDSDT FQGKSAVSIL bmy_09924T0/1-694 PFEAFLSFAL ANTQDTMRFV HVYSDRQQEF ANTLLPDSDA FQGKSAVSIL BACU005670/1-780 PFEAFLSFAL ANTQDTVRFV HVYSDRQQEF ANTLLPDSDT FHGKSAVSIL 451 500 ENSTTRP00000014945/1-779 ERRNTAGRVV YKTLEDPWTG SESDKFILLG YLDQLRKDPA LLSSEAVLPD ENSP00000365007/1-782 ERRNTAGRVV YKTLEDPWIG SESDKFILLG YLDQLRKDPA LLSSEAVLPD ENSBTAP00000003212/1-782 ERRNTAGRVV YKTLEDPWTG SESDKFILLG YLDQLRKDPA LLSSEAVLPD bmy_09924T0/1-694 ERRNTAGRVV YKTLEDPWTG SESDKFILLG YLDQLRKDPA LLSSEAVLPD BACU005670/1-780 ERRNTAGRVV YKTLEDPWTG SESDKFILLG YLDQLRKDPA LLSSEAVLPD 501 550 ENSTTRP00000014945/1-779 LTDELAPIFL LRWLYSASDY ISDSWDGIFH SNWREMMPLL SLVFSALFIL ENSP00000365007/1-782 LTDELAPVFL LRWFYSASDY ISDCWDSIFH NNWREMMPLL SLIFSALFIL ENSBTAP00000003212/1-782 LTDELAPIFL LRWLYSASDY ISDCWDSIFH NNWREMMPLL SLVFSALFIL bmy_09924T0/1-694 LADELAPIFL LRWLYSASDY ISDSWDSIFH SNWREMMPLL SLVFSALFIL BACU005670/1-780 LTDELAPIFL LRWLYSASDY ISDSWDSIFH SNWREMMPLL SLVFSALFIL 551 600 ENSTTRP00000014945/1-779 FGTVIIQAFS DSNEERESSP PDKEEAHEKT GRTEPSFTKE PSSKIPKKGF ENSP00000365007/1-782 FGTVIVQAFS DSNDERESSP PEKEEAQEKT GKTEPSFTKE NSSKIPKKGF ENSBTAP00000003212/1-782 FGTVIVQAFS DSNEERESSP PDKEEAREKT GKTEPSFTKE PSSKIPKKGF bmy_09924T0/1-694 FGTVIIQAF- ---------- ---------- ---------- --SKIPKKGF BACU005670/1-780 FGTVIIQAFS DSNEERESSP PDKEEAHEKT GKTEPSFTKE PSSKIPKKGF 601 650 ENSTTRP00000014945/1-779 VEVTELTDVT YTSNLVRLRP GHMNVVLILS NSTKTSLLQK FALEVYTFTG ENSP00000365007/1-782 VEVTELTDVT YTSNLVRLRP GHMNVVLILS NSTKTSLLQK FALEVYTFTG ENSBTAP00000003212/1-782 VEVTELTDIT YTSNLVRLRP GHMNVVLILS NSTKTSLLQK FALEVYSFTA bmy_09924T0/1-694 VEVTELTDVT YTSNLVRLRP GHINVVLILS NSTKTSLLQK FALEVYTFTG BACU005670/1-780 VEVTELTDVT YTSNLVRLRP GHINVVLILS NSTKTSLLQK FALEVYTFTG 651 700 ENSTTRP00000014945/1-779 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000365007/1-782 SSCLHFSFLS LDKHREWLEY LLEFAQDAAP IPNQYDKHFM ERDYTGYVLA ENSBTAP00000003212/1-782 SSCLHFSFLS LDKHREWLEY LLEFAQDAAP IPNQYDKHFM ERDYTGYVLA bmy_09924T0/1-694 SSCLHFSFLS LDKHREWLEY LLEFAQDVAP IPNQYDKHFM ERDYTGYVLA BACU005670/1-780 SSCLHFSFLS LDKHREWLEY LLEFAQDVAP IPNQYDKHFM ERDYTGYVLA 701 750 ENSTTRP00000014945/1-779 XXXXXXXXXX XXXXXXXXXX XXXXXXXDLD SSLHLGESRG K-SSGLGSRP ENSP00000365007/1-782 LNGHKKYFCL FKPQKTVEEE EAIGSCSDVD SSLYLGESRG KPSCGLGSRP ENSBTAP00000003212/1-782 LNGHKKYFCL FKPQKAVEEE EAMGPCSDFD SSLHLGECRG KSSSGLGPRP bmy_09924T0/1-694 LNGHKKYFCL FKPQKTVEEE EAMGSCSDLD SSLHLGESRG KSSSGLGSRP BACU005670/1-780 LNGHKKYFCL FKPQKTVEEE EAMGSCSDLD SSLHLGESRG KSSSGLGSRP 751 800 ENSTTRP00000014945/1-779 IKGKLSKLSL WMERLLEGSL QRFYIPSWRE LD ENSP00000365007/1-782 IKGKLSKLSL WMERLLEGSL QRFYIPSWPE LD ENSBTAP00000003212/1-782 IKGKLSKLSL WMERLLEGSL QRFYIPSWPD LD bmy_09924T0/1-694 IKGKLSKLSL WMERLLEGSL QRFYIPSWPE LD BACU005670/1-780 IKGKLSKLSL WMERLLEGSL QRFYIPSWPE LD