KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:20 2014 Check: 00 .. Name: BACU018844/1-290 Len: 352 Check: 6187 Weight: 1.00 Name: ENSTTRP00000003856/1-288 Len: 352 Check: 3104 Weight: 1.00 Name: ENSP00000374353/1-282 Len: 352 Check: 2255 Weight: 1.00 Name: bmy_01891T0/1-338 Len: 352 Check: 8358 Weight: 1.00 Name: ENSBTAP00000003220/1-283 Len: 352 Check: 3667 Weight: 1.00 // 1 50 BACU018844/1-290 MKVKVIPVLE DNYMYLVIEE HTREAVAVDV AVPKRLLEIV GREGVSLTTV ENSTTRP00000003856/1-288 MKVKVIPVLE DNYMYLVIEE HTREAVAVDV AVPKRLLEIV GREGVSLTTV ENSP00000374353/1-282 MKVKVIPVLE DNYMYLVIEE LTREAVAVDV AVPKRLLEIV GREGVSLTAV bmy_01891T0/1-338 MKVKVIPVLE DNYMYLVIEE HTREAVAVDV AVPKRLLEIV GREGVSLTTV ENSBTAP00000003220/1-283 MKVKVIPVLE DNYMYLVIEE RTREAVAVDV AVPKRLLEIV GRERVSLTTV 51 100 BACU018844/1-290 LTTHHHWDHA QGNTELVRLL PGLVVLGADE RICALTRRLA HGEELRFGAI ENSTTRP00000003856/1-288 LTTHHHWDHA RGNTELARLL PGLVVLGADE RICALTRRLV HGEELRFGAI ENSP00000374353/1-282 LTTHHHWDHA RGNPELARLR PGLAVLGADE RIFSLTRRLA HGEELRFGAI bmy_01891T0/1-338 LTTHHHWDHA RGNTELARLL PGLVVLGADE RICALTRRLA HGEELRFGAI ENSBTAP00000003220/1-283 LTTHHHWDHA RGNAELARLL PGLVVLGADE RICALTRRLA HGEELRFGAI 101 150 BACU018844/1-290 HVRCLLTPGH TSGHMSYFLW EDECLDPPAV FSGDALSVAG CGSRLETTAQ ENSTTRP00000003856/1-288 HVRCLLTPGH TSGHMSYFLW EDECLDPPAV FSGDALSVAG CGSRLETTAQ ENSP00000374353/1-282 HVRCLLTPGH TAGHMSYFLW EDDCPDPPAL FSGDALSVAG CGSCLEGSAQ bmy_01891T0/1-338 HVRCLLTPGH TSGHMSYFLW EDECLDPPAV FSGDALSVAG CGSRLETTAQ ENSBTAP00000003220/1-283 HVRCLLTPGH TLGHMSYFLW EEECPDPPAV FSGDALSVAG CGSRLEGTVQ 151 200 BACU018844/1-290 QMYHSLVETL GTLPPETKVF CGHEHTLGNL EFAQKVEPCN NHVKAKLSWA ENSTTRP00000003856/1-288 QMYHSLVETL GTLPPETKVF CGHEHTLGNL EFAQKVEPCN NHVKAKLSWA ENSP00000374353/1-282 QMYQSLAE-L GTLPPETKVF CGHEHTLSNL EFAQKVEPCN DHVRAKLSWA bmy_01891T0/1-338 QMYQSLVETL GTLPPETKVF CGHEHTLGNL EFAQKVEPCN NHVKAKLSWA ENSBTAP00000003220/1-283 QMYQSLVETL GTLPPETKVF CGHEHTLGNL EFAQKVEPYN DHVKAKLSWA 201 250 BACU018844/1-290 K--------- ---------- ---------- ---------- ---------- ENSTTRP00000003856/1-288 K--------- ---------- ---------- ---------- ---------- ENSP00000374353/1-282 K--------- ---------- ---------- ---------- ---------- bmy_01891T0/1-338 KGILPAKAPT GEGGELGSLQ VWPMSACPQG LGSSPQTAKL PGAARQGCDK ENSBTAP00000003220/1-283 K--------- ---------- ---------- ---------- ---------- 251 300 BACU018844/1-290 ---------- --VHSSPLSG KVGGWGRTGT REALQGNKAV TKACGHSRRG ENSTTRP00000003856/1-288 ---------- --VPLLPCGK RV-GREGLGS REGGAARQGV TKACGHSRRG ENSP00000374353/1-282 ------KRDE DDVPTVPSTL ---GEERLYN PFLRVAEEPV RKFTGKAVPA bmy_01891T0/1-338 GLWSFQKRDE DDMPTVPSTL ---GEELLYN PFLRVAEEPV CKFTGKVAPA ENSBTAP00000003220/1-283 ------QRDE DDVPTVPATL ---GEELLYN PFLRVAEESV RKFTGKVAPA 301 350 BACU018844/1-290 MRMMCPLCPQ PWARSSFTTP SVALARGQTV VLWASLAVIW MLREVSRDWL ENSTTRP00000003856/1-288 MRMMCPRCPQ PWARSSFTTP SGWREYD--C CPWASLAVIW MLREVLGDWL ENSP00000374353/1-282 -DVLEALCKE ---RARFEQA GEPRQPQ--- -ARALLALQW GLLSAAPHD- bmy_01891T0/1-338 -EVLEVLCKE ---RASFEQA AEPLQPQ--- -ARALLALQW GLLSMPRPK- ENSBTAP00000003220/1-283 -DVLDVLCRE ---RASFERA AEPLQPQ--- -ARALLALQW GLLSTPRQK- 351 400 BACU018844/1-290 L- ENSTTRP00000003856/1-288 LD ENSP00000374353/1-282 -- bmy_01891T0/1-338 -- ENSBTAP00000003220/1-283 --