KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:20 2014 Check: 00 .. Name: ENSP00000251588/1-476 Len: 578 Check: 9900 Weight: 1.00 Name: ENSBTAP00000003225/1-476 Len: 578 Check: 63 Weight: 1.00 Name: ENSTTRP00000003858/1-374 Len: 578 Check: 510 Weight: 1.00 Name: bmy_01892T0/1-578 Len: 578 Check: 7308 Weight: 1.00 Name: BACU009245/1-476 Len: 578 Check: 5128 Weight: 1.00 // 1 50 ENSP00000251588/1-476 MASPFSGALQ LTDLDDFIGP SQECIKPVKV EKRAGSGVAK IRIEDDGSYF ENSBTAP00000003225/1-476 MASPFSGALQ LTDLDDFIAP SQDCIKPMKV DRRPGSGVAK IHIEDDGSYF ENSTTRP00000003858/1-374 ---------- ---------- ---------- ---------- ---------- bmy_01892T0/1-578 MASLFSGALQ LTDLDDFIAP SQDCIKPMRV DKRPGSGAAK IHIEDDGSYF BACU009245/1-476 MASLFSGALQ LTDLDDFIAP SQDCIKPMRV DQRPGSGAAK IHIENDGSYF 51 100 ENSP00000251588/1-476 QINQDGGTRR LEKAKVSLND CLACSGCITS AETVLITQQS HEELKKVLDA ENSBTAP00000003225/1-476 QVSQDGGMKK LEKAKISLDD CLACSGCVTS AETVLITQQS HEELRKVLGA ENSTTRP00000003858/1-374 ---------- ---------- ---------- ---------- ---------- bmy_01892T0/1-578 QVSQDGGTKK LERAKISLDD CLACSGCVTS AETVLITQQS HEELRKVLGA BACU009245/1-476 QVSQDGGTKK LERAKISLDD CLACSGCVTS AETVLITQQS HEELRKVLGA 101 150 ENSP00000251588/1-476 NKMAAPSQQR LVVVSVSPQS RASLAARFQL NPTDTARKLT SFFKKIGVHF ENSBTAP00000003225/1-476 NKTAAPDQQK LVVISVSPQS RASLAVRFQL NPTDTARKLT AFFKKIGAHY ENSTTRP00000003858/1-374 --MVAPDQQR LVVISVSPQS RASLAVRFQL NPTDTARKLT AFFKKIGAHY bmy_01892T0/1-578 NKMAAPDQQR LVVISVSPQS RASLAVRFQL NPTDTARKLT AFFKKIGAHY BACU009245/1-476 NKMAAPDQQR LVVISVSPQS RASLAVRFQL NPTDTARKLT AFFKKIGAHY 151 200 ENSP00000251588/1-476 VFDTAFSRHF SLLESQREFV RRFRGQADCR QALPLLASAC PGWICYAEKT ENSBTAP00000003225/1-476 VFDTAFSRNF SLLESQREFV RRFRGQADPE QALPVLTSAC PGWICYAEKT ENSTTRP00000003858/1-374 VFDTAFSRNF SLLESQWEFV RRFRAQADSK QALPVLTSAC PGWICYAEKT bmy_01892T0/1-578 VFDTTFSRNF SLLESQREFV RRFRAQADSK QALPVLTSAC PGWICYAEKT BACU009245/1-476 VFDTTFSRNF SLLESQREFV RRFRAQADSK QALPVLTSAC PGWICYAEKT 201 250 ENSP00000251588/1-476 HGSFILPHIS TARSPQQVMG SLVKDFFAQQ ---------- ---------- ENSBTAP00000003225/1-476 HGSTLLPHIS TARSPQQVMG SLVKDFFAQQ ---------- ---------- ENSTTRP00000003858/1-374 HGNVLLPYIS TARSPQQVMG SLVKDFFSQQ ---------- ---------- bmy_01892T0/1-578 HGNVLLPHIS TARSPQQVMG SLVKDFFSQQ QVTGTSYKMS QDCSGHGPTR BACU009245/1-476 HGNVLLPHIS TARSPQQVMG SLVKDFFSQQ ---------- ---------- 251 300 ENSP00000251588/1-476 ---------- ---------- ---------- -QHLTPDKIY HVTVMPCYDK ENSBTAP00000003225/1-476 ---------- ---------- ---------- -QHLTPDKVY HATVMPCYDK ENSTTRP00000003858/1-374 ---------- ---------- ---------- -QHLTPDKIY HVTVMPCYDK bmy_01892T0/1-578 RTVLPAVPVL SPPPQPLLLG PGSCTTAVFS TQHLTPDKIY HVTVMPCYDK BACU009245/1-476 ---------- ---------- ---------- -QHLTPDKIY HVTVMPCYDK 301 350 ENSP00000251588/1-476 KLEASRPDFF NQEHQTRDVD CVLTTGEVFR LLEEEGVSLP DLEPAPLDSL ENSBTAP00000003225/1-476 KLEASRPDFF SQEHQTRDVD CVITTGEVFK LLEEEGVSLS ELEPAPLDSL ENSTTRP00000003858/1-374 KLEASRPDFF SQEHQTRDVD CVITTGEVFK LLEEEGVSLS ELESAPLDSL bmy_01892T0/1-578 KLEASRPDFF SQEHQTRDVD CVITTGEVFK LLEEEGVSLS ELEPAPLDSL BACU009245/1-476 KLEASRPDFF SQEHQTRDVD CVITTGEVFK LLEEEGVSLS ELEPAPLDSL 351 400 ENSP00000251588/1-476 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003225/1-476 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003858/1-374 ---------- ---------- ---------- ---------- ---------- bmy_01892T0/1-578 YVAPAMSGAV SSSSIGVLLT LGSLMSWWAA EGMRRGQALS SPFFSASASS BACU009245/1-476 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000251588/1-476 -CSGASAEEP TSHRGGGSGG YLEHVFRHAA RELFGIHVAE VTYKPLRNKD ENSBTAP00000003225/1-476 -CSSASAQEP TSHQGGGSGG YLEHVFRHAA QELFGIHVTE VTYRPLRNKD ENSTTRP00000003858/1-374 -CSSVSAQEP TSHQGGGSGG YLEHVFRHAA QELFGIHVTE VTYRPLRNKD bmy_01892T0/1-578 WCSSVSGQEP TSHQGGGSGG YLEHVFRYAA QELFGIHVTE VTYRPLRNKD BACU009245/1-476 -CSSVSAQEP TSHQGGGSGG YLEHVFRHAA WELFGIHVTE VTYRPLRNKD 451 500 ENSP00000251588/1-476 FQEVTLEKEG QVLLHFAMAY GFRNIQNLVQ RLKRGRCPYH YVEVMACPSG ENSBTAP00000003225/1-476 LQEVILEREG QVLLHFAAAY GFRNIQNLVQ KLKRGRCPYH YVEVMACPAG ENSTTRP00000003858/1-374 LQEVTLEREG QVLLHFAAAY GFRNIQNLVQ KLKRGRCPYH YVEVMACPAG bmy_01892T0/1-578 LQEVTLEREG RVLLHFAAAY GFRNIQNLVQ KLKRGRCPYH YVEVMACPSG BACU009245/1-476 LQEVTLEREG RVLLHFAAAY GFRNIQNLVQ KLKRGRCPYH YVEVMACPSG 501 550 ENSP00000251588/1-476 CLNGGGQLQA PDRPSRELLQ HVERLYGMVR AEAPEDAPGV QELYTHWLQG ENSBTAP00000003225/1-476 CLNGGGQLKA PDMPGKELLQ QVERLYGLVR TEAPEDAPGI QELYERWLQG ENSTTRP00000003858/1-374 CLNGGGQLKA PDMPGKELLQ QVERLYSMVR TEAPEDAPGV QELYGHWLQG bmy_01892T0/1-578 CLNGGGQLKA PDMPGKELLQ QVERLYSMVR TEAPEDAPGV QELYGHWLQG BACU009245/1-476 CLNGGGQLKA PDMPGKELLQ QVERLYSMVR TEAPEDAPGV QELYGHWLQG 551 600 ENSP00000251588/1-476 TDSECAGRLL HTQYHAVEKA STGLGIRW ENSBTAP00000003225/1-476 AGSERAGRLL HTSYHAVEKA GSGLSIRW ENSTTRP00000003858/1-374 EGSEQASRLL HTSYHAVEKA GSSLSIRW bmy_01892T0/1-578 EGSEQASRLL HTSYHAVEKA GSSLSIRW BACU009245/1-476 EGSEQASRLL HTSYHAVEKA GSSLSIRW