KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:22 2014 Check: 00 .. Name: ENSP00000229266/1-406 Len: 412 Check: 5981 Weight: 1.00 Name: bmy_08317T0/1-285 Len: 412 Check: 9073 Weight: 1.00 Name: ENSBTAP00000003236/1-406 Len: 412 Check: 6773 Weight: 1.00 Name: ENSTTRP00000016313/1-331 Len: 412 Check: 9109 Weight: 1.00 Name: BACU000929/1-264 Len: 412 Check: 9453 Weight: 1.00 // 1 50 ENSP00000229266/1-406 MAAGAGAGSA PRWLRALSEP LSAAQLRRLE EHRYSAAGVS LLEPPLQLYW bmy_08317T0/1-285 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003236/1-406 MAAGAGARPA PRWLKALTEP LSAAQLRRLE EHRYTAAGVS LLEPPLQLYW ENSTTRP00000016313/1-331 ---------- ---------- ---------- ---------- ---------- BACU000929/1-264 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000229266/1-406 TWLLQWIPLW MAPNSITLLG LAVNVVTTLV LISYCPTATE ------EAPY bmy_08317T0/1-285 ---------- MAPNSITLLG LAINLLTTLL LISYCPTVTE ------EAPY ENSBTAP00000003236/1-406 TWLLQWIPLW MAPNSITLLG LAINMLTTLV LISYCPTVTE ------EAPY ENSTTRP00000016313/1-331 ---------- ---------- ---------P VASACPTPRH LAGPRRPAPY BACU000929/1-264 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000229266/1-406 WTYLLCALGL FIYQSLDAID GKQARRTNSC SPLGELFDHG CDSLSTVFMA bmy_08317T0/1-285 WTYLLCALGL FIYQSLDAID GKQARRTNSC SPLGELFDHG CDSLSTVFMA ENSBTAP00000003236/1-406 WTYLLCALGL FIYQSLDAID GKQARRTNSC SPLGELFDHG CDSLSTVFMA ENSTTRP00000016313/1-331 WTYLLCALGL FIYQSLDAID GKQARRTNSC SPLGELFDHG CDSLSTVFMA BACU000929/1-264 ---------- ---------- ---------- ---------- --------MA 151 200 ENSP00000229266/1-406 VGASIAARLG TYPDWFFFCS FIGMFVFYCA HWQTYVSGML RFGKVDVTEI bmy_08317T0/1-285 VGASIAVRLG THPDWLFFCS FIGMFMFYCA HWQTYVSGVL RFGKVDVTEI ENSBTAP00000003236/1-406 VGASIAVRLG THPDWLFFCS FIGMFMFYCA HWQTYVSGVL RFGKVDVTEI ENSTTRP00000016313/1-331 VGASIAVRLG TYPDWLFFCC FIGMFMFYCA HWQTYVSGVL RFGKVDVTE- BACU000929/1-264 VGASIAVRLG THPDWLFFCS FIGMFMFYCA HWQTYVSGVL RFGKVDVTEI 201 250 ENSP00000229266/1-406 QIALVIVFVL SAFGGATMWD YTIPILEIKL KILPVLGFLG GVIFSCSNYF bmy_08317T0/1-285 QVALVIVFVL STFGGATMWD YTIPVLEIKL KILPVLGVVG GAIFSCSNYF ENSBTAP00000003236/1-406 QIALVIVFVL STFGGATMWD YTIPILEIKL KILPVLGVVG GAIFSCSNYF ENSTTRP00000016313/1-331 QVALVIVFV- STFGGATMWD YTIPVLEIKL KILPVLGVVG GAIFSCSNYF BACU000929/1-264 QVALVIIFVL STFGGATVWD YMIPVLEIKL KILPVLGVVG GAIFSCSNYF 251 300 ENSP00000229266/1-406 HVILHGGVGK NGSTIAGTSV LSPGLHIGLI IILAIMIYKK SATDVFEKHP bmy_08317T0/1-285 HVILHGGVGK NGSTIA---- ---------- ---------- ---------- ENSBTAP00000003236/1-406 HVILHGGVGK NGSTIAGTSV LSPGLHIGII IILAIMIYKK SATNLFEKHP ENSTTRP00000016313/1-331 HVILHGGVGK NGSTIAGTSV LSPGLHIGII ILLAIMIYKK SATNLFEKHP BACU000929/1-264 HVILHGGVGK NGSTIAGTSV LSPGLHIGII IILAIMIYKK SATNLFEKHP 301 350 ENSP00000229266/1-406 CLYILMFGCV FAKVSQKLVV AHMTKSELYL QDTVFLGPGL LFLDQYFNNF bmy_08317T0/1-285 ---------- ---------I AHMTKSELYL QDTVFLGPGL LFLDQYFNNF ENSBTAP00000003236/1-406 CLYTLMFGCV FAKVSQKLVI AHMTKSELYL QDTVFIGPGL LFLDQYFNNF ENSTTRP00000016313/1-331 CLYTLMFGCV FAKISQKLVI AHMTKSELYL QDTVFLGPGL LFLDQYFNNF BACU000929/1-264 CLYTLMFGCV FAKISQKLVI AHMTKSELYL QDTVFLGPGL LFLDQYFNNF 351 400 ENSP00000229266/1-406 IDEYVVLWMA MVISSFDMVI YFSALCLQIS RHLHLNIFKT ACHQAPEQVQ bmy_08317T0/1-285 VDEYVVLWIA MVISSFDMMG YFSALCLQIS RHLHLSIFKT SCHQAPEQV- ENSBTAP00000003236/1-406 VDEYIVLWIA MVISSLDMMR YFSALCLQIS RHLHLSIFKT SCHQAPEQVQ ENSTTRP00000016313/1-331 VDEYVVLWIA MVISSFDMMR YFSALCLQIS RHLHLSIFKT SCHQAPEQVQ BACU000929/1-264 VDEYVVLWIA MVISSFDMMR YFSALCLQIS RHLHLSIFKT SCHQAPEQVQ 401 450 ENSP00000229266/1-406 VLSSKSHQNN MD bmy_08317T0/1-285 -------HKH ID ENSBTAP00000003236/1-406 VLPPKSHQNN MD ENSTTRP00000016313/1-331 VIPSKSHQNN MD BACU000929/1-264 VLPSKSHQNN MD