KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:23 2014 Check: 00 .. Name: BACU001900/1-716 Len: 796 Check: 1965 Weight: 1.00 Name: bmy_21708T0/1-735 Len: 796 Check: 5878 Weight: 1.00 Name: ENSBTAP00000003239/1-796 Len: 796 Check: 2393 Weight: 1.00 Name: ENSP00000299138/1-796 Len: 796 Check: 1706 Weight: 1.00 Name: ENSTTRP00000012605/1-796 Len: 796 Check: 2371 Weight: 1.00 // 1 50 BACU001900/1-716 ---------- ---------- ---------- ---------- ---------- bmy_21708T0/1-735 MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML ENSBTAP00000003239/1-796 MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML ENSP00000299138/1-796 MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML ENSTTRP00000012605/1-796 MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML 51 100 BACU001900/1-716 ---------- -------MAI SDELHYLEVY LTDEFAKGRK VADLYELVQY bmy_21708T0/1-735 GELRTSMLSP KSYYELYMAI SDELHYLEVY LTDEFAKGRK VADLYELVQY ENSBTAP00000003239/1-796 GELRTSMLSP KSYYELYMAI SDELHYLEVY LTDEFAKGRK VADLYELVQY ENSP00000299138/1-796 GELRTSMLSP KSYYELYMAI SDELHYLEVY LTDEFAKGRK VADLYELVQY ENSTTRP00000012605/1-796 GELRTSMLSP KSYYELYMAI SDELHYLEVY LTDEFAKGRK VADLYELVQY 101 150 BACU001900/1-716 AGNIIPRLYL LITVGVVYVK SFPQSRKDIL KDLVEMCRGV QHPLRGLFLR bmy_21708T0/1-735 AGNIIPRL-- ---------- ---------- ---------- ---------- ENSBTAP00000003239/1-796 AGNIIPRLYL LITVGVVYVK SFPQSRKDIL KDLVEMCRGV QHPLRGLFLR ENSP00000299138/1-796 AGNIIPRLYL LITVGVVYVK SFPQSRKDIL KDLVEMCRGV QHPLRGLFLR ENSTTRP00000012605/1-796 AGNIIPRLYL LITVGVVYVK SFPQSRKDIL KDLVEMCRGV QHPLRGLFLR 151 200 BACU001900/1-716 NYLLQCTRNI LPDEGEPTDE ETTGDISDSM DFVLLNFAEM NKLWVRMQHQ bmy_21708T0/1-735 ---------- ---------E ETTGDISDSM DFVLLNFAEM NKLWVRMQHQ ENSBTAP00000003239/1-796 NYLLQCTRNI LPDEGEPTDE ETTGDISDSM DFVLLNFAEM NKLWVRMQHQ ENSP00000299138/1-796 NYLLQCTRNI LPDEGEPTDE ETTGDISDSM DFVLLNFAEM NKLWVRMQHQ ENSTTRP00000012605/1-796 NYLLQCTRNI LPDEGEPTDE ETTGDISDSM DFVLLNFAEM NKLWVRMQHQ 201 250 BACU001900/1-716 GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ IVLTGILEQV bmy_21708T0/1-735 GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ IVLTGILEQV ENSBTAP00000003239/1-796 GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ IVLTGILEQV ENSP00000299138/1-796 GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ IVLTGILEQV ENSTTRP00000012605/1-796 GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ IVLTGILEQV 251 300 BACU001900/1-716 VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII bmy_21708T0/1-735 VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII ENSBTAP00000003239/1-796 VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII ENSP00000299138/1-796 VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII ENSTTRP00000012605/1-796 VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII 301 350 BACU001900/1-716 ALIDRLALFA HREDGPGIPT DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL bmy_21708T0/1-735 ALIDRLALFA HREDGPGIPT DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL ENSBTAP00000003239/1-796 ALIDRLALFA HREDGPGIPT DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL ENSP00000299138/1-796 ALIDRLALFA HREDGPGIPA DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL ENSTTRP00000012605/1-796 ALIDRLALFA HREDGPGIPT DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL 351 400 BACU001900/1-716 QVSLINLAMK CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR bmy_21708T0/1-735 QVSLINLAMK CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR ENSBTAP00000003239/1-796 QVSLINLAMK CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR ENSP00000299138/1-796 QVSLINLAMK CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR ENSTTRP00000012605/1-796 QVSLINLAMK CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR 401 450 BACU001900/1-716 LLKIPVDTYN NILTVLKLKH FHPLFEYFDY ESRKSMSCYV LSNVLDFNTE bmy_21708T0/1-735 LLKIPVDTYN NILTVLKLKH FHPLFEYFDY ESRKSMSCYV LSNVLDFNTE ENSBTAP00000003239/1-796 LLKIPVDTYN NILTVLKLKH FHPLFEYFDY ESRKSMSCYV LSNVLDYNTE ENSP00000299138/1-796 LLKIPVDTYN NILTVLKLKH FHPLFEYFDY ESRKSMSCYV LSNVLDYNTE ENSTTRP00000012605/1-796 LLKIPVDTYN NILTVLKLKH FHPLFEYFDY ESRKSMSCYV LSNVLDYNTE 451 500 BACU001900/1-716 IVSQD----- --------QD QPDQPVEDPD PEDFADEQSL VGRFIHLLRS bmy_21708T0/1-735 IVSQDQVDSI MNLVSTLIQD QPDQPVEDPD PEDFADEQSL VGRFIHLLRS ENSBTAP00000003239/1-796 IVSQDQVDSI MNLVSTLIQD QPDQPVEEPD PEDFADEQSL VGRFIHLLRS ENSP00000299138/1-796 IVSQDQVDSI MNLVSTLIQD QPDQPVEDPD PEDFADEQSL VGRFIHLLRS ENSTTRP00000012605/1-796 IVSQDQVDSI MNLVSTLIQD QPDQPVEDPD PEDFADEQSL VGRFIHLLRS 501 550 BACU001900/1-716 EDPDQQYLIL NTARKHFGAG GNQRIRFTLP PLVFAAYQLA FRYKENSKVD bmy_21708T0/1-735 EDPDQQYLIL NTARKHFGAG GNQRIRFTLP PLVFAAYQLA FRYKENSKVD ENSBTAP00000003239/1-796 EDPDQQYLIL NTARKHFGAG GNQRIRFTLP PLVFAAYQLA FRYKENSKVD ENSP00000299138/1-796 EDPDQQYLIL NTARKHFGAG GNQRIRFTLP PLVFAAYQLA FRYKENSKVD ENSTTRP00000012605/1-796 EDPDQQYLIL NTARKHFGAG GNQRIRFTLP PLVFAAYQLA FRYKENSKVD 551 600 BACU001900/1-716 DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE bmy_21708T0/1-735 DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE ENSBTAP00000003239/1-796 DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE ENSP00000299138/1-796 DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE ENSTTRP00000012605/1-796 DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE 601 650 BACU001900/1-716 TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR bmy_21708T0/1-735 TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR ENSBTAP00000003239/1-796 TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR ENSP00000299138/1-796 TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR ENSTTRP00000012605/1-796 TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR 651 700 BACU001900/1-716 TQCALAASKL LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL bmy_21708T0/1-735 TQCALAASKL LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL ENSBTAP00000003239/1-796 TQCALAASKL LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL ENSP00000299138/1-796 TQCALAASKL LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL ENSTTRP00000012605/1-796 TQCALAASKL LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL 701 750 BACU001900/1-716 KKALKIANQC MDPSLQVQLF IEILNRYIYF YEKENDAVTI QVLNQLIQKI bmy_21708T0/1-735 KKALKIANQC MDPSLQVQLF IEILNRYIYF YEKENDAVTI QVLNQLIQKI ENSBTAP00000003239/1-796 KKALKIANQC MDPSLQVQLF IEILNRYIYF YEKENDAVTI QVLNQLIQKI ENSP00000299138/1-796 KKALKIANQC MDPSLQVQLF IEILNRYIYF YEKENDAVTI QVLNQLIQKI ENSTTRP00000012605/1-796 KKALKIANQC MDPSLQVQLF IEILNRYIYF YEKENDAVTI QVLNQLIQKI 751 800 BACU001900/1-716 REDLPNLESS EETEQINKHF HNTLEHLRLR RESPESEGPI YEGLVL bmy_21708T0/1-735 REDLPNLESS EETEQINKHF HNTLEHLRLR RESPESEGPI YEGLIL ENSBTAP00000003239/1-796 REDLPNLESS EETEQINKHF HNTLEHLRLR RESPESEGPI YEGLIL ENSP00000299138/1-796 REDLPNLESS EETEQINKHF HNTLEHLRLR RESPESEGPI YEGLIL ENSTTRP00000012605/1-796 REDLPNLESS EETEQINKHF HNTLEHLRLR RESPESEGPI YEGLIL