KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:23 2014 Check: 00 .. Name: ENSBTAP00000003245/1-293 Len: 374 Check: 22 Weight: 1.00 Name: ENSP00000346693/1-296 Len: 374 Check: 4411 Weight: 1.00 Name: bmy_00839T0/1-258 Len: 374 Check: 3185 Weight: 1.00 Name: BACU005146/1-373 Len: 374 Check: 3990 Weight: 1.00 Name: ENSTTRP00000003450/1-296 Len: 374 Check: 5652 Weight: 1.00 // 1 50 ENSBTAP00000003245/1-293 ---------- -EHLKAFDDE VNAFLDNMFG PR-------- ---------- ENSP00000346693/1-296 ---------- MEHLKAFDDE INAFLDNMFG PR-------- ---------- bmy_00839T0/1-258 ---------- ---------- -------MFG PR-------- ---------A BACU005146/1-373 MGWSVTLQCL KEHLKAFDDE INAFLDNMFG PRAFNLSSVC STDPSLTIPA ENSTTRP00000003450/1-296 ---------- MEHLKAFDGE INAFLDNMFG PR-------- ---------- 51 100 ENSBTAP00000003245/1-293 ---------- ---------- ------DSRV RGWFMLDSYL PTFSLTVLYL ENSP00000346693/1-296 ---------- ---------- ------DSRV RGWFMLDSYL PTFFLTVMYL bmy_00839T0/1-258 PTGFFFRTVT QTQLAYAVAC SSLSNLDSRV RGWFMLDSYL PTFSLTVLYL BACU005146/1-373 PTGFFFRTIT QTQLAYAVAC SSLTNLDSRV RGWFMLDSYL PTFSLTVLYL ENSTTRP00000003450/1-296 ---------- ---------- ------DSRV RGWFLLDSYL PTFSLTVLYL 101 150 ENSBTAP00000003245/1-293 LLIWLGNRCM RNRPALSLRG ILTLYNLGIT LLSAYMLAEL ILSSWEGGYN ENSP00000346693/1-296 LSIWLGNKYM KNRPALSLRG ILTLYNLGIT LLSAYMLAEL ILSTWEGGYN bmy_00839T0/1-258 LSIWLGNKYM RSRPALSLRG ILTLYNLGIT LLSAYMLAEL ILSSWEGGYN BACU005146/1-373 LCIWLGNKYM RSRAALSLRG ILTLYNLGIT LLSAYMLAEL ILSSWEGGYN ENSTTRP00000003450/1-296 LSIWLGNRYM RSRPALSLRG VLTLYNLGIT LLSAYMLAEL ILSSWEGGYN 151 200 ENSBTAP00000003245/1-293 LQCQDLTSAG EADIRVARVL WWYYFSKLIE FLDTIFFVLR KKTSQVTFLH ENSP00000346693/1-296 LQCQDLTSAG EADIRVAKVL WWYYFSKSVE FLDTIFFVLR KKTSQITFLH bmy_00839T0/1-258 LQCQDLTSAG EADIRNSNLY ---------- ---------- -----CTFLG BACU005146/1-373 LQCQDLTSAG EADIRVARVL WWYYFSKLIE FLDTIFFVLR KKTSQITFLH ENSTTRP00000003450/1-296 LQCQDLTSAG EADIRVAEVL WWYYFSKLIE FLDTIFFVLR KKTSQITFLH 201 250 ENSBTAP00000003245/1-293 VYHHASMFNI WWCVLNWIPC GQSFFGPTLN SFIHILMYSY YGLSVFPSMH ENSP00000346693/1-296 VYHHASMFNI WWCVLNWIPC GQSFFGPTLN SFIHILMYSY YGLSVFPSMH bmy_00839T0/1-258 ---------- ---------- ---FFGPTLN SFIHILMYTY YGLSVFPCMH BACU005146/1-373 VYHHASMFNI WWCVLNWIPC GQSFFGPTLN SFIHILMYTY YGLSVFPSMH ENSTTRP00000003450/1-296 VYHHASMFNI WWCVLNWIPC GQSFFGPTLN SFIHILMYTY YGLSVFPSMR 251 300 ENSBTAP00000003245/1-293 KYLWWKKYLT QAQL------ ---------- --------VQ FLLTITHTMS ENSP00000346693/1-296 KYLWWKKYLT QAQL------ ---------- --------VQ FVLTITHTMS bmy_00839T0/1-258 KYLWWKKYLT QAQL------ ---------- --------AQ FVLTVTHTMS BACU005146/1-373 KYLWWKKYLT QAQLMQGVRA VDFSLPDCRV VPPLPPLQVQ FVLTVTHTMS ENSTTRP00000003450/1-296 KYLWWKKYLT QAQL------ ---------- --------VQ FVLTVTHTMS 301 350 ENSBTAP00000003245/1-293 AVVRPCGFPL GCLIFQSSYM MTLVILFLNF YIQTYRKKPM KKAMEE--AG ENSP00000346693/1-296 AVVKPCGFPF GCLIFQSSYM LTLVILFLNF YVQTYRKKPM KKDMQEPPAG bmy_00839T0/1-258 AVVRPCGFPF GCLIFQSSYM LTLVILFLNF YVQTYRKKPX KKDGEEPHAG BACU005146/1-373 AVVRPCGFPF GCLIFQSSYM LTLVILFLNF YVQTYRKKPM KKDGEEPHAG ENSTTRP00000003450/1-296 AVVRPCGFPF GCLIFQSSYM LTLVILFLNF YVQTYRKKPM KKDGEDPHAG 351 400 ENSBTAP00000003245/1-293 KEVKNGFSKA YFSTANGVIS KKAQ ENSP00000346693/1-296 KEVKNGFSKA YFTAANGVMN KKAQ bmy_00839T0/1-258 KEVKNGFSKA YFTATNGITN KKAQ BACU005146/1-373 KEV-NGFSKA YFTATNGITN KKAQ ENSTTRP00000003450/1-296 QEVKNGFSKA YFTATNGITN KKAQ