KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:20:24 2014 Check: 00 .. Name: ENSBTAP00000003250/1-269 Len: 347 Check: 7877 Weight: 1.00 Name: BACU012364/1-280 Len: 347 Check: 117 Weight: 1.00 Name: bmy_15424T0/1-343 Len: 347 Check: 2710 Weight: 1.00 Name: ENSP00000358953/1-287 Len: 347 Check: 8335 Weight: 1.00 // 1 50 ENSBTAP00000003250/1-269 ---------- ---------- ---------- ---------- ---------- BACU012364/1-280 ---------- -MCQKRNLGS QDSSYPIEGL SL-------- ---ELKIRAH bmy_15424T0/1-343 MVAEAPPSCG HALLKNGYHS ASGKKPLWAP PLISLVGLGD ESCTARDKSP ENSP00000358953/1-287 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000003250/1-269 ---------M ELERIVSAAL LAFVQTHLPE ADLSGLDDVI FSYVLGVLGD BACU012364/1-280 CWGKRRGESM ELERIVSAAL LAFVQTHLPE ADLSGLDEVI FSYVLGVLED bmy_15424T0/1-343 AAPDGAGESM ELERIVSAAL LAFVQTHLPE ADLSGLDEVI FSYVLGVLED ENSP00000358953/1-287 ---------M ELERIVSAAL LAFVQTHLPE ADLSGLDEVI FSYVLGVLED 101 150 ENSBTAP00000003250/1-269 LGPSGPSEEN FDMEAFTEMM EAYVPGFAHI PRWGLAGAKR TRGAGRWWRV BACU012364/1-280 LGPSGPSEEN FDMEAFTEMM EAYVPGFAHI PR-GTIGEMM QKLSGQLSGA bmy_15424T0/1-343 LGPSGPSEEN FDMEAFTEMM EAYVPGFAHI PR-GTIGEMM QKLSGQLSGA ENSP00000358953/1-287 LGPSGPSEEN FDMEAFTEMM EAYVPGFAHI PR-GTIGDMM QKLSGQLSDA 151 200 ENSBTAP00000003250/1-269 VELSFNHPPG L-IRGTIG-- -DMIQK---- ---------- LSGQLSXAAG BACU012364/1-280 RNKENLQPQN SEVQGQVSVS PEPLQR---L REETMSSPTA AGDTQDEASG bmy_15424T0/1-343 RNKENLQPQS SEVQGQVSVS PEPLQR---L REETMSSPTA AADTQDEASG ENSP00000358953/1-287 RNKENLQPQS SGVQGQVPIS PEPLQRPEML KEETRSSAAA AADTQDEATG 201 250 ENSBTAP00000003250/1-269 PEEELLPGVD VLLEVFPTCS VEQAQWVLAK ARGDLEEAVQ MLVEGKQ-GP BACU012364/1-280 AEEELLPGVD VLLEVFPTCS VEQAQWVLAK ARGDLEEAVQ MLVEGKEEGP bmy_15424T0/1-343 AEEELLPGVD VLLEVFPTCS VEQAQWVLAK ARGDLEEAVQ MLVEGKEEGP ENSP00000358953/1-287 AEEELLPGVD VLLEVFPTCS VEQAQWVLAK ARGDLEEAVQ MLVEGKEEGP 251 300 ENSBTAP00000003250/1-269 PAWDGPNQDL PRRLRGPQKD ELKSFILQKY MMVDSAEDQK IHRPMAPKEA BACU012364/1-280 PAWDGPNQ-- ---------- ---------- ---------- ---------A bmy_15424T0/1-343 PAWDGPNQDL PRRLRGPQKD ELKSFILQKY MMVDSAEDQK IHRPMTPKEA ENSP00000358953/1-287 AAWEGPNQDL PRRLRGPQKD ELKSFILQKY MMVDSAEDQK IHRPMAPKEA 301 350 ENSBTAP00000003250/1-269 PKKLIRYIDN QIVSTKGERF KDVRNPEAEE MKATYINLKP ARKYRFH BACU012364/1-280 PKKLIRYIDN QVVSTKGERF KDVRNPEAEE MKATYINLKP ARKYRFH bmy_15424T0/1-343 PKKLIRYIDN QVVSTKGERF KDVRNPEAEE MKATYINLKP ARKYRFH ENSP00000358953/1-287 PKKLIRYIDN QVVSTKGERF KDVRNPEAEE MKATYINLKP ARKYRFH