KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:20:27 2014 Check: 00 .. Name: ENSTTRP00000014848/1-595 Len: 610 Check: 1482 Weight: 1.00 Name: bmy_16794T0/1-415 Len: 610 Check: 302 Weight: 1.00 Name: ENSBTAP00000003267/1-544 Len: 610 Check: 5040 Weight: 1.00 Name: BACU009054/1-546 Len: 610 Check: 3796 Weight: 1.00 // 1 50 ENSTTRP00000014848/1-595 TLLLADLKRA GTMGSSCVGL RISAAPRGEG GASRVIRIKV RGLEMTTPAG bmy_16794T0/1-415 ---------- ---------- ---------- ---------- ----MTTPAG ENSBTAP00000003267/1-544 ---------- ---------- ---------- ---------- ----MTTPAG BACU009054/1-546 ---------- ---------- ---------- ---------- ----MTTPAG 51 100 ENSTTRP00000014848/1-595 SGTGFGSVSW WGLSPAVDLQ AERVAAGGVL QATPQPAVVL SGPPVDPDSQ bmy_16794T0/1-415 SGTGFGSVSW WGLSPAVDLQ AE-------- ---------- ---------- ENSBTAP00000003267/1-544 SGTGFGSVSW WGLSPAVDLQ AE-------- ---------- -SPPVDPDSQ BACU009054/1-546 SGTGFGSVSW WGLSPAVDLQ AE-------- ---------- -SPPVDPDSQ 101 150 ENSTTRP00000014848/1-595 ADTEHGTPEL NVLLLGSVDG RHLLRTLTRA ALWPRRRFRF YVLENNMEAV bmy_16794T0/1-415 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003267/1-544 AETEHETPEL NVLLLGSVDG RHLLRTLARA ALWPRRRFHF YVLENNLEAV BACU009054/1-546 ADTEHGTPEL NVLLLGSVDG RHLLRTLARA ALWPRRRFRF YVLENNMEAV 151 200 ENSTTRP00000014848/1-595 ARHMLIFSLA LEDPEKMGLQ ERSETFLEVW GNALLRPSVA AFVRTQAGRL bmy_16794T0/1-415 ---------- ---------- KRSETFLEMW GNALLRPPVA AFVRAQAGRL ENSBTAP00000003267/1-544 ARHILIFSLA LEDPEKMGLQ ERSETFLEVW GNALLRPPVA AFVRAQAGRL BACU009054/1-546 ARHMLIFCLA LEDPEKMGLQ ERSETFLEVW GNSLLRPPVA AFVRAQAGRL 201 250 ENSTTRP00000014848/1-595 ARLVPEPDRL AEQLPWLSLG ALKFRERDAL EAVFRFWAGG EKGPEAFPMS bmy_16794T0/1-415 ARLVPEPDRL AEQLPWLSLG ALKFRERDAL EAVFRFWAGG EKGPEAFPMS ENSBTAP00000003267/1-544 AHLVPEPDRL AEQLPWLSLG ALKFRERDAL EAVFRFWAGG EKGPEAFPMS BACU009054/1-546 ARLVPEPDRL AEQLPWLSLG ALKFRERDAL EAVFRFWAGG EKGPEAFPMS 251 300 ENSTTRP00000014848/1-595 RLWDSRLRHY LGSRYDARRG VSDWDLHMKL HDRGARVIHT SEFRRWRDTG bmy_16794T0/1-415 RLWDSRLRHY LGSRYDARRG VSDWDLHMKL HDRGARVIHT SEFRRWRDTG ENSBTAP00000003267/1-544 RLWDSRLRQY LGSRYDARHG VSDWDLHMKL HDRGARVIHT REFRRWRDTG BACU009054/1-546 RLWDSRLRHY LGSRYDARRG VSDWDLHMKL HDRGARVIHT SEFRRWRDTG 301 350 ENSTTRP00000014848/1-595 VAFELRDSSA YHVPNRTLAS GRLLSHRGER VAARGYWGDI VTGPFVAFGI bmy_16794T0/1-415 VAFELRDASA YHVPNRTLAS GRLLSHRGER VAARGYWGDI VTGPFVAFGI ENSBTAP00000003267/1-544 VAFELRDSSA YHVPNRTLAS GRLLSHRGER VAARGYWGDI ATGPFVAFGI BACU009054/1-546 VAFELRDASA YHVPNRTLAS GRLLSHRGER VAARGYWGDI VTGPFVAFGI 351 400 ENSTTRP00000014848/1-595 EADDETLLKT SNGQPIKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16794T0/1-415 EADDETLLRT SNGQPIKPRI -RPRPFSPKD C-------GR DHAAQRDGAV ENSBTAP00000003267/1-544 EADDETLLRT SNGQPVKTAC -EITEHNVAE LFREMAAWGH PRAAEGDPEQ BACU009054/1-546 EADDETLLRT SNGQPIKTAG -EITQHNVTE LFREMAAWGR PRAAQGDPAQ 401 450 ENSTTRP00000014848/1-595 XXXXXXXXXX XXXPVPESFT VHFLSLGSAQ TLHHKSCYKG RFQLLYVACG bmy_16794T0/1-415 PRDGRLGAPE SRPGRPRAGA ---------- ---RRRGWK- ---------- ENSBTAP00000003267/1-544 VQGGAEGSSE PAAPAPEPFT VHFLSLDSAH TLHHKSCYMG QFQLLYVACG BACU009054/1-546 VQGDADGSPE PAAPVPESFA VHFLSLGSAL TLHHKSCYKG RFQLLYMACG 451 500 ENSTTRP00000014848/1-595 MVHLLSPELG ACVAPGGRLI VELAQFLVDL RQEQLQGFST RVGELAQAAG bmy_16794T0/1-415 ---------- ----PG---- ---AWFLVDL RQEQLQGFST RVGELAQAAG ENSBTAP00000003267/1-544 MVHLLSAELG ACVAPGGRLI VELAQFLVDL RQEQLQAFSS RVGELAQAAG BACU009054/1-546 MVHLLSPELG ACVAPGGRLI VELAQFLVDL RQEQLQGFST RVGELAQAAG 501 550 ENSTTRP00000014848/1-595 FAPQPGARSS QTFARFYKAG DSAPSHKDPA VGSGTPPPEV LVPPLEATNP bmy_16794T0/1-415 FAPQPGARRS QTFARFYKAG DSAPSHKDPA VGSGTPSSEV LAPPLEATNP ENSBTAP00000003267/1-544 FAPQLGGKPS DTFARFYKAG DSAPGHEDPA VESGTPPPEV LAPPLEATDP BACU009054/1-546 FAPHPGARRS QTFARFYKAG NSAPSHKDPA VGSGTPPPGV LAPPLEATNP 551 600 ENSTTRP00000014848/1-595 PPEDLTQPLE GGIPPSEPLK QPSESQASLL EALVPPRESD ---------- bmy_16794T0/1-415 PPEDLTQPLE GGTPPSEPLR RPSESQASLL EALVPPTGSQ TPKPESLTVP ENSBTAP00000003267/1-544 PSEDRTQPLE SGNPPSEPLK LTSESQASLL EASVPPTGSQ APKSENQTVP BACU009054/1-546 PPEDLTQPLE GGTPPSEPLK RPSESQASLL EALVPPTGSQ TPKPESLTVP 601 650 ENSTTRP00000014848/1-595 PQTRV----- bmy_16794T0/1-415 PETNSPIPNF ENSBTAP00000003267/1-544 PETKYPIP-- BACU009054/1-546 PETNSPIPNF