KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:31 2014 Check: 00 .. Name: ENSTTRP00000013694/1-983 Len: 998 Check: 4121 Weight: 1.00 Name: bmy_04765T0/1-597 Len: 998 Check: 1476 Weight: 1.00 Name: BACU013562/1-594 Len: 998 Check: 2239 Weight: 1.00 Name: ENSBTAP00000003291/1-984 Len: 998 Check: 9840 Weight: 1.00 Name: ENSP00000350815/1-984 Len: 998 Check: 7287 Weight: 1.00 // 1 50 ENSTTRP00000013694/1-983 METKGYHSLP EGLDMERRWG QASQAAEHSS SG--PTERTD ENNYMEVVNI bmy_04765T0/1-597 ---------- ----MERRWG QASQAAERSS SG--PTERTD ENNYMEVVNI BACU013562/1-594 METKGYHSLP EGLDMERRWG QASQAAERSS SG--PTERTD ENNYMEVVNI ENSBTAP00000003291/1-984 METKGYHSLP EGLEMERRWG QLSQPAERPA LGPVPTEQSD ESNYMEIVDV ENSP00000350815/1-984 METKGYHSLP EGLDMERRWG QVSQAVERSS LG--PTERTD ENNYMEIVNV 51 100 ENSTTRP00000013694/1-983 SCVSGAIPNN STQGSSKEKQ ELLPCLQQDN NRSGILPSDI KTELESKELS bmy_04765T0/1-597 SCVSGAIPNN STQGSSKEKQ ELLPCLQQDN NRSGILPSDI KTELESKELS BACU013562/1-594 SCVSGAIPNN STQGSSKEKQ ELLPCLQQDN NRSGILPSDI KTELESKELS ENSBTAP00000003291/1-984 RCVSGAIPNS STQGSSKEKH ELLPCLQQDN SRSGILPSDI KTELESKELS ENSP00000350815/1-984 SCVSGAIPNN STQGSSKEKQ ELLPCLQQDN NRPGILTSDI KTELESKELS 101 150 ENSTTRP00000013694/1-983 ATVAESMGLY MDSVREADYA YDQQNPQGSA SPAKIYPHVE QMVKFYKENG bmy_04765T0/1-597 ATVAESMGLY MDSVREADYT YDQQNPQGSA SPAKIYPHVE QMVKFYKENG BACU013562/1-594 ATVAESMGLY MDSVREADYA YDQQNPQGSA SPAKIYPHVE QMVKFYKENG ENSBTAP00000003291/1-984 ATVAESMGLY MDSVREADYA YDQQNPQGSG SPAKMYQNVE QLVKFYKENG ENSP00000350815/1-984 ATVAESMGLY MDSVRDADYS YEQQNQQGSM SPAKIYQNVE QLVKFYKGNG 151 200 ENSTTRP00000013694/1-983 HRPSTLGNVS RPL------- -RSFMADSGS SENGGVMRTM VKSPILGHEK bmy_04765T0/1-597 HRPSTLGSVS RPLRSFMSDS GRSFMSDSGS SENGGVMRAM VKSPILCHEK BACU013562/1-594 HRPSTLGSVS RPLRPFMSDS GRSFLSDSGS SENGGVMRAM VKSPILCHEK ENSBTAP00000003291/1-984 HRPSTLGGAS RPL------- -RSFLPDSGG SVNGGVMRNV VKSPILGHEK ENSP00000350815/1-984 HRPSTLSCVN TPL------- -RSFMSDSGS SVNGGVMRAV VKSPIMCHEK 201 250 ENSTTRP00000013694/1-983 SPSVCSPLNM SSSGCSPAGI SCVSSTSASF GSFAVHSPIA QGTPLPCSPN bmy_04765T0/1-597 SPSVCSPLNM SPSGCSPAGI SCVSSTSASF GSFTVHSPIA QGTPLPCSPN BACU013562/1-594 SPSVCSPLNM SSSGCSPAGI SCVSSTSASF GSFTVHSPIA QGTPLPCSPN ENSBTAP00000003291/1-984 GPAVCSPLTL SSSGCSPASI SCVSSTSASF GSFPVHSPIA QGTPLPCSPN ENSP00000350815/1-984 SPSVCSPLNM TSSVCSPAGI NSVSSTTASF GSFPVHSPIT QGTPLTCSPN 251 300 ENSTTRP00000013694/1-983 VENRGSRSHS PAHASNVGSP LSSPLSSMKS PISSPPSHCS VKSPVSSPNN bmy_04765T0/1-597 VENRGSRSHS PAHASNVGSP LSSPLSSMKS PISSPPSHCS VKSPVSSPNN BACU013562/1-594 VENRGSRSHS PAHASNVGSP LSSTLSSMKS PISSPPSHCS VKSPVSSPNN ENSBTAP00000003291/1-984 VETRGSRSHS PAHASNVGSP LSSPLSSMKS PISSPPSHCS VKSPVSSPNN ENSP00000350815/1-984 VENRGSRSHS PAHASNVGSP LSSPLSSMKS SISSPPSHCS VKSPVSSPNN 301 350 ENSTTRP00000013694/1-983 VLLRSCVSSP ANINNSRCSV SSPSNTNNRS TLSSPTASTV GSICSPGSNA bmy_04765T0/1-597 VILRSCVSSP ANINNSRCSV SSPSNTNNRS TLSSPTASTV GSICSPGSNA BACU013562/1-594 VILRSCVSSP ANINNSRCSV SSPSNTNNRS TLSSPTASTV GSICSPGSNA ENSBTAP00000003291/1-984 VTLRSCVSSP ANINNSRCSV SSPSNTNNRS TLSSPAASTV GSICSPGSTA ENSP00000350815/1-984 VTLRSSVSSP ANINNSRCSV SSPSNTNNRS TLSSPAASTV GSICSPVNNA 351 400 ENSTTRP00000013694/1-983 FSYTASGTPA GSSAARDAVP SPDTHEKGAH ELPFPKTEEA ESAVSNGVTG bmy_04765T0/1-597 FSYTASGTPA GSSAARDAVP SPDTHEKGAQ ELPFPKTEEA ESAVSNGVTG BACU013562/1-594 FSYTASGTPA GSSAARDVVP SPDTHEKGAQ ELPFPKTEEA ESAVSNGVAG ENSBTAP00000003291/1-984 FSYTASGTPV GSSAARDVVP SPDTQEKGAQ EVPFPKTEET ENAISHGVAG ENSP00000350815/1-984 FSYTASGTSA GSSTLRDVVP SPDTQEKGAQ EVPFPKTEEV ESAISNGVTG 401 450 ENSTTRP00000013694/1-983 QLNIIQYIKP EPDGAFSSSC LGGNSKINSD SPFSVPIKQE STKHSCSGTS bmy_04765T0/1-597 QLNIIQYIKP EPDGAFSSSC LGGNSKINSD SPFSVPIKQE STKHSCSGTS BACU013562/1-594 QLNIIQYIKP EPDGAFSSSC LGGNSKINSD SPFSVPIKQE STKHSCSGTS ENSBTAP00000003291/1-984 QLNIVQYIKP EPDGAFSSSC LGGNSKINSD SPFSVPIKQE STKHSCSGTS ENSP00000350815/1-984 QLNIVQYIKP EPDGAFSSSC LGGNSKINSD SSFSVPIKQE STKHSCSGTS 451 500 ENSTTRP00000013694/1-983 FKGNPAVNPF PFMDGSYFSF MDDKDYYSLS GILGPPVPGF DGNCEGSGFP bmy_04765T0/1-597 FKGNPAINPF PFMDGSYFSF MDDKDYYSLS GILGPPVPGF DGNCEGSGFP BACU013562/1-594 FKGNPAVNPF PFMDGSYFSF MDDKDYYSLS GILGPPVPGF DGNCEGSGFP ENSBTAP00000003291/1-984 FKGNPAINPF PFMDGSYFSF MDDKDYYSLS GILGPPVPGF DGNCEGSGFP ENSP00000350815/1-984 FKGNPTVNPF PFMDGSYFSF MDDKDYYSLS GILGPPVPGF DGNCEGSGFP 501 550 ENSTTRP00000013694/1-983 MGIKQEPDDG SYYPEASIPS SAIVGVNSGG QSFHYRIGAQ GTISLSRSAR bmy_04765T0/1-597 MGIKQEPDDG SYYPEASIPS SAIVGVNSGG QSFHYRIGAQ GTISLSRSAR BACU013562/1-594 MGIKQEPDDG SYYPEASIPS SAIVGVNSGG QSFHYRIGAQ GTISLSRSAR ENSBTAP00000003291/1-984 MGIKQEPDDG SFYPEASIPP SAIVGVNSGG QSFHYRIGAQ GTISLSRSAR ENSP00000350815/1-984 VGIKQEPDDG SYYPEASIPS SAIVGVNSGG QSFHYRIGAQ GTISLSRSAR 551 600 ENSTTRP00000013694/1-983 DQSFQHLSSF PPINTLVESW KSHGDLSS-R SDGYPVLEYI PENVSSSTLR bmy_04765T0/1-597 DQSFQHLSSF PPVNTLVESW KSHGDLSSRR SDGYPVLEYI PENVS----- BACU013562/1-594 DQSFQHLSSF PPVNTLVESW KSHGDLSSRR SDGYPVLEYI PENVS----- ENSBTAP00000003291/1-984 DQSFQHLSSF PPVNTLVESW KSHSDLSSRR SDGYPVLEYI PENVSSSTLR ENSP00000350815/1-984 DQSFQHLSSF PPVNTLVESW KSHGDLSSRR SDGYPVLEYI PENVSSSTLR 601 650 ENSTTRP00000013694/1-983 SVSTGSSRPS KICLVCGDEA SGCHYGVVTC GSCKVFFKRA VEGKCSXXXX bmy_04765T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 SVSTGSSRPS KICLVCGDEA SGCHYGVVTC GSCKVFFKRA VEGQ----HN ENSP00000350815/1-984 SVSTGSSRPS KICLVCGDEA SGCHYGVVTC GSCKVFFKRA VEGQ----HN 651 700 ENSTTRP00000013694/1-983 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXRKSK KLGKLKGIHE bmy_04765T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 YLCAGRNDCI IDKIRRKNCP ACRLQKCLQA GMNLGARKSK KLGKLKGLHE ENSP00000350815/1-984 YLCAGRNDCI IDKIRRKNCP ACRLQKCLQA GMNLGARKSK KLGKLKGIHE 701 750 ENSTTRP00000013694/1-983 EQSQQ----P PPPPPQSPEE GTTYIAPAQE PSVNSALVPQ LSTISRALTP bmy_04765T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 EQAQQ--PPA PPPPPQSPEE GTTYIAPAQE PSVNSALVPQ LSTISRALTP ENSP00000350815/1-984 EQPQQQQPPP PPPPPQSPEE GTTYIAPAKE PSVNTALVPQ LSTISRALTP 751 800 ENSTTRP00000013694/1-983 SPSMVLETIE PEIVYAGYDN SKPDTAENLL STLNRLAGKQ MIQVVKWAKV bmy_04765T0/1-597 ---------- ---------- ---------- ----RLVNRM QVVVFCTNKS BACU013562/1-594 ---------- ---------- ---------- ----R----- ---------- ENSBTAP00000003291/1-984 SPSMILETIE PEIVYAGYDG SKPDTAENLL STLNRLAGKQ MIQVVKWAKV ENSP00000350815/1-984 SPVMVLENIE PEIVYAGYDS SKPDTAENLL STLNRLAGKQ MIQVVKWAKV 801 850 ENSTTRP00000013694/1-983 IPGFKNLPLE DQITLIQYSW MCLSSFALSW RSYKHTNSQF LYFAPDLVFN bmy_04765T0/1-597 FP-------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 LPGFKNLPLE DQITLIQYSW MCLSSFALSW RSYKHTNSQY LYFAPDLVFN ENSP00000350815/1-984 LPGFKNLPLE DQITLIQYSW MCLSSFALSW RSYKHTNSQF LYFAPDLVFN 851 900 ENSTTRP00000013694/1-983 EEKMHQSAMY ELCQGMHQIS LQFVRLQLTF EEYTVMKVLL LLSTIPKDGL bmy_04765T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 EEKMHQSAMY ELCQGMHQIS LQFVRLQLTF EEYTVMKVLL LLSTIPKDGL ENSP00000350815/1-984 EEKMHQSAMY ELCQGMHQIS LQFVRLQLTF EEYTIMKVLL LLSTIPKDGL 901 950 ENSTTRP00000013694/1-983 KSQAAFEEMR TNYIKELRKM VTKCPNNSGQ SWQRFYQLTK LLDSMHDLVS bmy_04765T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU013562/1-594 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003291/1-984 KSQAAFEEMR TNYIKELRKM VTKCPSNSGQ SWQRFYQLTK LLDSMHDLVS ENSP00000350815/1-984 KSQAAFEEMR TNYIKELRKM VTKCPNNSGQ SWQRFYQLTK LLDSMHDLVS 951 1000 ENSTTRP00000013694/1-983 DLLEFCFYTF RESQALKVEF PAMLVEIISD QLPKVESGNA KTLYFHRK bmy_04765T0/1-597 ---------- ---------- ---------- ---------- -------- BACU013562/1-594 ---------- ---------- ---------- ---------- -------- ENSBTAP00000003291/1-984 DLLEFCFYTF RESQALKVEF PAMLVEIISD QLPKVESGNA KTLYFHRK ENSP00000350815/1-984 DLLEFCFYTF RESHALKVEF PAMLVEIISD QLPKVESGNA KPLYFHRK