KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:20:32 2014 Check: 00 .. Name: ENSTTRP00000008643/1-370 Len: 428 Check: 1048 Weight: 1.00 Name: BACU008489/1-385 Len: 428 Check: 8337 Weight: 1.00 Name: bmy_16644T0/1-404 Len: 428 Check: 9869 Weight: 1.00 Name: ENSBTAP00000003319/1-360 Len: 428 Check: 8308 Weight: 1.00 // 1 50 ENSTTRP00000008643/1-370 ---------- ---------- ---------- ---------- ---MTQQPLR BACU008489/1-385 ---------- ---------- ---------- ---------- ---MTQQPLR bmy_16644T0/1-404 VRPDVNTGVG RQGTGGQKAV PRAAPRAWAR IGDAQRSGKQ SWTMTQQPLR ENSBTAP00000003319/1-360 ---------- ---------- ---------- ---------- ---MTQQPLR 51 100 ENSTTRP00000008643/1-370 GVTSLRFNQD QSCFCCAMET GVRIYNVEPL MEKGHLDHEQ VGSMGLVEML BACU008489/1-385 GVTSLRFNQD QSCFCCAMET GVRIYNVEPL MEKGHLDHEQ VGSMGLVEML bmy_16644T0/1-404 GVTSLRFNQD QSCFCCAMET GVRIYNVEPL MEKGHLDHEQ VGSMGLVEML ENSBTAP00000003319/1-360 GVTSLRFNQD QSCFCCAMET GVRIYNVEPL MEKGHLDHEQ VGSMGLVEML 101 150 ENSTTRP00000008643/1-370 HRSNLLALVG GGSSPKFSEI S--------- ------XXXX XXXXXXXXXX BACU008489/1-385 HRSNLRAQVG GGSSPKFSEI SGVGLVSPGL PLTLNLGPDN TPTCPAVLIW bmy_16644T0/1-404 HRSNLLALVG GGSSPKFSEI S--------- ---------- -----AVLIW ENSBTAP00000003319/1-360 HRSNLLALVG GGSSPKFSEI S--------- ---------- ------VLIW 151 200 ENSTTRP00000008643/1-370 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008489/1-385 DDAREGKDSK DKLVLEFTFT KPVLAVRMRH DKIVIVLKNR IYVYSFPDNP bmy_16644T0/1-404 DDAREGKDSK DKLVLEFTFT KPVLAVRMRH DKIVIVLKNR IYVYSFPDNP ENSBTAP00000003319/1-360 DDAREGKDSK DKLVLEFTFT KPVLAVRMRH DKIVIVLKNR IYVYSFPDNP 201 250 ENSTTRP00000008643/1-370 XXXXSLPAPH PTLGLCDLCP SLEKQLLVFP GHKCGSLQLV DLASTKPGTS BACU008489/1-385 RKLFEFDTRD NPKGLCDLCP SLEKQLLVFP GHKCGSLQLV DLASTKPGTS bmy_16644T0/1-404 RKLFEFDTRD NPKGLCDLCP SLEKQLLVFP GHKCGSLQLV DLASTKPGTS ENSBTAP00000003319/1-360 RKLFEFDTRD NPKGLCDLCP SLEKQLLVFP GHKCGSLQLV DLASTKPGTS 251 300 ENSTTRP00000008643/1-370 SAPFTINAHQ SDVACVSLNQ PGTVVASASQ NGTLIRLFDT QSKEKLVELR BACU008489/1-385 SAPFTINAHQ SDVACVSLNQ PGTVVASASQ KGTLIRLFDT QSKEKLVELR bmy_16644T0/1-404 SAPFTINAHQ SDVACVSLNQ PGTVVASASQ KGTLIRLFDT QSKEKLVELR ENSBTAP00000003319/1-360 SAPFTINAHQ SDVACVSLNQ PGTVVASASQ KGTLIRLFDT QSKEKLVELR 301 350 ENSTTRP00000008643/1-370 RGTDPATLYC INFSHDSSFL CASSDKGTVH IFALKDTRLN RRSALARVGK BACU008489/1-385 RGTDPATLYC INFSHDSSFL CASSDKGTVH IFALKDTRLN RRSALARVGK bmy_16644T0/1-404 RGTDPATLYC INFSHDSSFL CASSDKGTVH IFALKDTRLN RRSALARVGK ENSBTAP00000003319/1-360 RGTDPATLYC INFSHDSSFL CASSDKGTVH IFALKDTRLN RRSALARVGK 351 400 ENSTTRP00000008643/1-370 VGPMIGQYVD SQWSLASFTV PAESACICAF GRNTSKNVNS VIAICVDGTF BACU008489/1-385 VGPMIGQYVD SQWSLASFTV PAESACICAF GRNTSKNVNS VIAICVDGTF bmy_16644T0/1-404 VGPMIGQYVD SQWSLASFTV PAESACICAF GRNTSKNVNS VIAICVDGTF ENSBTAP00000003319/1-360 VGPMIGQYVD SQWSLASFTV PAESACICAF GRNTSKNVNS VIAICVDGTF 401 450 ENSTTRP00000008643/1-370 HKYVFTPDGN CNREAFDVYL DICDDDDF BACU008489/1-385 HKYVFTPDGN CNREAFDVYL DICDDDDF bmy_16644T0/1-404 HKYVFTPDGN CNREAFDVYL DICDDDDF ENSBTAP00000003319/1-360 HKYVFTPDGN CNREAFDVYL DICDDDDF