KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:20:34 2014 Check: 00 .. Name: ENSBTAP00000003327/1-366 Len: 366 Check: 8757 Weight: 1.00 Name: bmy_18148T0/1-345 Len: 366 Check: 8738 Weight: 1.00 Name: ENSTTRP00000012250/1-358 Len: 366 Check: 8571 Weight: 1.00 Name: BACU000576/1-366 Len: 366 Check: 7090 Weight: 1.00 // 1 50 ENSBTAP00000003327/1-366 MAAVRKPVLL GLRDAAVHGR PTGPSAWTAS KLGGVPDALP AVAAPRPVCE bmy_18148T0/1-345 MAAVRKPVLL GLRDTAVHGC PTGLGAWTAS KLGGVPDALP AVAAPRPVCE ENSTTRP00000012250/1-358 MAAVRKPVLL GLRDTAVHCC PTGLGAWTAS KLGGIPDALP AVAAPRPVCE BACU000576/1-366 MAAVRKPVLL GLRDTAVHGC PTGLGAWTAS KLGGVPDALP AVAAPRPVCE 51 100 ENSBTAP00000003327/1-366 LCRQPLALVV QVYCPLEGSP FHRLLHVFAC PRPECGSGGA RSWKVFRSQC bmy_18148T0/1-345 LCRQPLALVV QVYCPLEGSP FHRLLHVFAC PRPGCASGRA RSWKVLRSQC ENSTTRP00000012250/1-358 LCRQPLVLVV QVYCPLEGSP FHRLLHVFAC PRPGCASGRA RSWKVFRSQC BACU000576/1-366 LCRQPLALVV QVYCPLEGSP FHRLLHVFAC PRPGCASGRA RSWKVFRSQC 101 150 ENSBTAP00000003327/1-366 LQMREKETQD AQKQENGLTA EDWCEGADDW GSDSEEASPL QPVSEFGNDL bmy_18148T0/1-345 LQIREKETQD AQKQENGLTA EDWCEGADDW GSDSDEAPPP QVISDFGNDS ENSTTRP00000012250/1-358 LQTREKETQD AQKQENGLTA EDWCEGADDW GSDREEAPPP QVISDFRNDS BACU000576/1-366 LQIREKETQD AQKQENGLTA EDWCEGADDW GSDSEEAPPP QVISDFGNDS 151 200 ENSBTAP00000003327/1-366 SNAKDRDWTS QLQDLRLQDT VPGVAPPAPP GGGPALPPSV PQFLPYYICV bmy_18148T0/1-345 SSAKDRDWTA QLQDLRLQDT VPGAAPAVPP GEGVALPSVV PQFLPYYICV ENSTTRP00000012250/1-358 SRAKDRDWTA QLQDLRLQDT VPGAALPVPP E--------L PQFLPYYICV BACU000576/1-366 SSAKDRDWTA QLQDLRLQDP VPGAAPAVPP GEGVALPPVV PQFLPYYICV 201 250 ENSBTAP00000003327/1-366 VDEDDYTDFI SLDHAQSLLR EYQQREGVDM EQLLSQSLSS DGDEKYEKTV bmy_18148T0/1-345 VDEDDYRDFV SLDHAQSLLR EYQQREGTDM EQLLSHSLSS DGDEKYEKTI ENSTTRP00000012250/1-358 VDEDDYRDYV SLDHAQSLLR EYQQREGIDM EQLLSQSLSS DGDEKYEKTI BACU000576/1-366 VDEDDCRDFV SLDHAQSLLR EYQQREGTDM EQLLSHSLSS DGDEKYEKTI 251 300 ENSBTAP00000003327/1-366 IKSGDKMFYK FMKRIAACQE QILRYSWSGE PLFLTCPTSE VTELPACSYC bmy_18148T0/1-345 IKSGDKMFYK FMKRIAACQE QILRYSWSGE PLFLTCPTSE VTELPACSHC ENSTTRP00000012250/1-358 IKSGDKMFYK FMKRIAACQE QILRYSWSGE PLFLTCPTSE VTELPACSHC BACU000576/1-366 IKSGDKMFYK FMKRIAACQE QILRYSWSGE PLFLTCPTSE VTELPACSHC 301 350 ENSBTAP00000003327/1-366 GARRIFEFQL MPALVSMLRS ANLDLSVEFG TILIYTCEKS CWPQNDQAPM bmy_18148T0/1-345 GIRRIFEFQL MPALVSMLRS ANLG-----N KPFIYLS--- LWVSSTNL-- ENSTTRP00000012250/1-358 GIRRIFEFQL MPALVSMLRS ANLGLSVEFG TILIYTCEKS CWPQNHQAPV BACU000576/1-366 GIRRIFEFQL MPALVSMLRS ANLGLSVEFG TILIYTCEKS CWPQNHQTPV 351 400 ENSBTAP00000003327/1-366 EEFCIIQEDP DELLFK bmy_18148T0/1-345 ---------- -ELFXK ENSTTRP00000012250/1-358 EEFCIIQEDP DELLFK BACU000576/1-366 EEFCIIQEDP DELLFK